DR404975

Overview
NameDR404975
Unique NameDR404975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CARDF_CYNCA (Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.192e-28
Identity = 72/145 (49.66%), Postives = 84/145 (57.93%), Query Frame = 2
Query:  290 DSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            DS + +VAL N  D  Y+GE+ IGTP Q FTVIFDTGSS LWVPS+K +                             Y +   S + SQD+V +GDLVVK QDFIEAT+EA   FL   FDGILGL FQ IS    +PVWYNML
Sbjct:    2 DSGSAVVALTNDRDTSYYGEIGIGTPPQKFTVIFDTGSSVLWVPSSKAHS---------------------------MYESSGSSTYKSQDSVTIGDLVVKEQDFIEATEEADNVFLNRLFDGILGLSFQTIS----VPVWYNML 115          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: RENI1_MOUSE (Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.739e-28
Identity = 76/208 (36.54%), Postives = 109/208 (52.40%), Query Frame = 2
Query:  113 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLV---GQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            L L+ SP  F+LP        +  KK+  +  ++   G  +++         +R +L        T  V L N+++ QY+GE+ IGTP QTF VIFDTGS+NLWVPS KC    +                  NG+   I YG+G + GF SQD+V VG + V  Q F E T+   I F+ AKFDG+LG+GF   ++G   PV+ ++L
Sbjct:   11 LLLLWSPCTFSLPTRTATFERIPLKKMPSVREILEERGVDMTRLSAEWGVFTKRPSLTNL-----TSPVVLTNYLNTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGSDFTIHYGSGRVKGFLSQDSVTVGGITV-TQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVGGVTPVFDHIL 212          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: RENI_RAT (Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.088e-27
Identity = 75/208 (36.06%), Postives = 110/208 (52.88%), Query Frame = 2
Query:  113 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLV---GQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            L L+ +  +F+LP D      +  KK+  +  ++   G  +++        +++ +       + T  V L N++D QY+GE+ IGTPSQTF VIFDTGS+NLWVPS KC                       NG    I YG+G + GF SQD V VG ++V  Q F E T+   I F+ AKFDG+LG+GF   ++   IPV+ ++L
Sbjct:   11 LLLLWTSCSFSLPTDTASFGRILLKKMPSVREILEERGVDMTRISAEWGEFIKKSSF-----TNVTSPVVLTNYLDTQYYGEIGIGTPSQTFKVIFDTGSANLWVPSTKCGPLYTACEIHNLYDSSESSSYMENGTEFTIHYGSGKVKGFLSQDVVTVGGIIV-TQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVDGVIPVFDHIL 212          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: RENI2_MOUSE (Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.856e-27
Identity = 75/205 (36.59%), Postives = 110/205 (53.66%), Query Frame = 2
Query:  113 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            L L+ SP  F+LP  G     +  KK+  +  ++ +    +   +      +    SL D  + +V L N++++QY+GE+ IGTP QTF VIFDTGS+NLWVPS KC    +                  NG    I YG+G + GF SQD+V VG + V  Q F E T+   I F+ A+FDG+LG+GF   ++G   PV+ ++L
Sbjct:   11 LLLLWSPCTFSLPT-GTTFERIPLKKMPSVREILEER-GVDMTRLSAEWDVFTKRSSLTDLISPVV-LTNYLNSQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGDDFTIHYGSGRVKGFLSQDSVTVGGITV-TQTFGEVTELPLIPFMLAQFDGVLGMGFPAQAVGGVTPVFDHIL 211          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CATE_RAT (Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3)

HSP 1 Score: 122.479 bits (306), Expect = 2.424e-27
Identity = 65/137 (47.45%), Postives = 83/137 (60.58%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            L N++D +YFG VSIG+PSQ FTVIFDTGSSNLWVPS  C  S                    G   +IQYGTG+++G    D V V  L V+ Q F E+ KE   TF+ A+FDGILGLG+  +++G   PV+ NM+
Sbjct:   72 LINYLDMEYFGTVSIGSPSQNFTVIFDTGSSNLWVPSVYCT-SPACKAHPVFHPSQSSTYMEVGNHFSIQYGTGSLTGIIGADQVSVEGLTVEGQQFGESVKEPGQTFVNAEFDGILGLGYPSLAVGGVTPVFDNMM 207          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: RENI_CANFA (Renin OS=Canis familiaris GN=REN PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.399e-27
Identity = 63/145 (43.45%), Postives = 85/145 (58.62%), Query Frame = 2
Query:  293 SDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCY-FSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            + T  V L N++D QY+GE+ IGTP QTF V+FDTGS+NLWVPS +C                       NG +  I+YG+G + GF SQD V VG + V  Q F E T+   I F+ AKFDG+LG+GF   ++G   PV+ ++L
Sbjct:   70 NSTSPVVLTNYLDTQYYGEIGIGTPPQTFKVVFDTGSANLWVPSTRCSPLYTACEIHCLYDSSESSSYMENGTTFTIRYGSGKVKGFLSQDMVTVGGITV-TQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVGGVTPVFDHIL 213          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CATE_RANCA (Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.209e-27
Identity = 68/189 (35.98%), Postives = 100/189 (52.91%), Query Frame = 2
Query:  158 GLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            G++R+ L+++K   + +++ +         +       L  S    +T    L N++D +YFG++SIGTP Q FTVIFDTGSSNLWVPS  C  S                   NG +  IQYGTG ++G    D V V  + V++Q F E+  E   TF  + FDGILGL +  +++   IPV+ NM+
Sbjct:   16 GIIRVPLKRQK--SMRKILKEKGKLSHLWTKQGNEFLQLSDSCSSPETASEPLMNYLDVEYFGQISIGTPPQQFTVIFDTGSSNLWVPSIYC-TSQACTKHNRYRPSESTTYVSNGEAFFIQYGTGNLTGILGIDQVTVQGITVQSQTFAESVSEPGSTFQDSNFDGILGLAYPNLAVDNCIPVFDNMI 201          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PEPA1_RABIT (Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.203e-26
Identity = 65/137 (47.45%), Postives = 81/137 (59.12%), Query Frame = 2
Query:  311 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNM 721
            +L N++DA+YFG +SIGTP Q FTVIFDTGSSNLWVPS  C  S+                     + +I YGTG+++G    D VKVG++   NQ F  +  E  ITFL A FDGILGL +  IS   A PV+ NM
Sbjct:   66 SLENYLDAEYFGTISIGTPPQEFTVIFDTGSSNLWVPSTYC-SSLACFLHKRFNPDDSSTFQATSETLSITYGTGSMTGILGYDTVKVGNIEDTNQIFGLSKTEPGITFLVAPFDGILGLAYPSISASDATPVFDNM 201          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: NAPSA_HUMAN (Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.571e-26
Identity = 62/129 (48.06%), Postives = 77/129 (59.69%), Query Frame = 2
Query:  308 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI 691
            V L+N+ D QYFGE+ +GTP Q FTV FDTGSSNLWVPS +C +FSV                  NG   AIQYGTG + G  S+D + +G +   +  F EA  E S+ F  A FDGILGLGF  +S+
Sbjct:   68 VPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRFDPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAFAHFDGILGLGFPILSV 196          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CATE_MOUSE (Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.052e-26
Identity = 64/137 (46.72%), Postives = 80/137 (58.39%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            L N++D +YFG +SIGTP Q FTVIFDTGSSNLWVPS  C  S                    G   +IQYGTG+++G    D V V  L V  Q F E+ KE   TF+ A+FDGILGLG+  ++ G   PV+ NM+
Sbjct:   71 LINYLDMEYFGTISIGTPPQNFTVIFDTGSSNLWVPSVYCT-SPACKAHPVFHPSQSDTYTEVGNHFSIQYGTGSLTGIIGADQVSVEGLTVDGQQFGESVKEPGQTFVNAEFDGILGLGYPSLAAGGVTPVFDNMM 206          
The following BLAST results are available for this feature:
BLAST of DR404975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
CARDF_CYNCA2.192e-2849.66Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 ... [more]
RENI1_MOUSE3.739e-2836.54Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1[more]
RENI_RAT1.088e-2736.06Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2[more]
RENI2_MOUSE1.856e-2736.59Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1[more]
CATE_RAT2.424e-2747.45Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3[more]
RENI_CANFA5.399e-2743.45Renin OS=Canis familiaris GN=REN PE=2 SV=1[more]
CATE_RANCA9.209e-2735.98Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1[more]
PEPA1_RABIT1.203e-2647.45Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1[more]
NAPSA_HUMAN1.571e-2648.06Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1[more]
CATE_MOUSE2.052e-2646.72Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCSAA-PNP1239P21 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone CSAA-PNP1239P21 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404975 ID=DR404975; Name=DR404975; organism=Citrus sinensis; type=EST; length=741bp
GGGGGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTGTCTGTGCTCT
TTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATTCGG
GTTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTTGCC
AAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGATCAGA
TCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGATGAGA
ACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGATAC
TGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGGAGG
TTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACAGGA
AGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTCTTG
CTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAAGGA
ATGGGGCATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGTTTC
TTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCAGGA
TTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCAAGT
TTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAATTGGAAAAGCC
ATTCCAGTCTGGTATAATATGCTTTGATTAAGGTCTCGTTA
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