DR404975

Overview
NameDR404975
Unique NameDR404975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PEPA_RHIFE (Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21
Identity = 56/136 (41.18%), Postives = 71/136 (52.21%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNM 721
            L N+MD +YFG + IGTP Q FTVIFDTGSSNLWVPS  C                      N    ++ YGTG+++G    D V+VG +   NQ F  +  E       A FDGILGL +  I+   A PV+ N+
Sbjct:   66 LENYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYCSSPACSNHNRFNPQQSSTYQGTN-QKLSVAYGTGSMTGILGYDTVQVGGITDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSIASSGATPVFDNI 200          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PEPC_MONDO (Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21
Identity = 52/137 (37.96%), Postives = 76/137 (55.47%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            + N++D+ YFGE+SIGTP Q F V+FDTGSSNLWVPS  C  S                    G +  + YG+G+++     D V V ++VV NQ+F  +  E +  F  + FDGILG+ +  +++G +  V   ML
Sbjct:   67 ITNYLDSFYFGEISIGTPPQNFLVLFDTGSSNLWVPSTYCQ-SQACSNHNRFSPSQSSTFTNGGQTYTLSYGSGSLTVVLGYDTVTVQNIVVSNQEFGLSESEPTSPFYYSDFDGILGMAYPAMAVGNSPTVMQGML 202          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PEPA_SORUN (Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21
Identity = 58/136 (42.65%), Postives = 72/136 (52.94%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNM 721
            L N+MD +YFG +SIGTP Q FTVIFDTGSSNLWVPS  C  S                      + +I YGTG+++G    D V+V  +   NQ F  +  E       + FDGILGL +  IS   A PV+ NM
Sbjct:   67 LVNYMDMEYFGTISIGTPPQEFTVIFDTGSSNLWVPSIYC-SSPACSNHNRFDPQKSSTFKPTSQTVSIAYGTGSMTGVLGYDTVQVAGIADTNQIFGLSQSEPGSFLYYSPFDGILGLAYPSISSSGATPVFDNM 201          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CHYM_SHEEP (Chymosin OS=Ovis aries GN=CYM PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.288e-20
Identity = 54/146 (36.99%), Postives = 80/146 (54.79%), Query Frame = 2
Query:  287 GDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            G  +   V L N++D+QYFG++ +GTP Q FTV+FDTGSS+ WVPS  C  S                    G   +I+YGTG++ G    D V V ++V   Q    +T+E    F  A+FDGILG+ +  ++   ++PV+ NM+
Sbjct:   57 GFGEVASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIRYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLASEYSVPVFDNMM 201          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CHYM_BOVIN (Chymosin OS=Bos taurus GN=CYM PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.288e-20
Identity = 55/146 (37.67%), Postives = 79/146 (54.11%), Query Frame = 2
Query:  287 GDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            G  +   V L N++D+QYFG++ +GTP Q FTV+FDTGSS+ WVPS  C  S                    G   +I YGTG++ G    D V V ++V   Q    +T+E    F  A+FDGILG+ +  ++   +IPV+ NM+
Sbjct:   57 GFGEVASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLASEYSIPVFDNMM 201          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PAG2_BOVIN (Pregnancy-associated glycoprotein 2 OS=Bos taurus GN=PAG2 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.682e-20
Identity = 63/174 (36.21%), Postives = 85/174 (48.85%), Query Frame = 2
Query:  230 KEEETMRTPVRRYNLHG----------SLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNM 721
            K+ +T+R  +R  NL            S  DS   I  L N++D  Y G ++IGTP Q F V+FDTGS+NLWVP   C  S                    G+   I YG+G I GF   D V++G+LV   Q F  + +E    F +  FDGILGL F  + I   IP++ N+
Sbjct:   22 KKMKTLRETLREKNLLNNFLEEQAYRLSKNDSKITIHPLRNYLDTAYVGNITIGTPPQEFRVVFDTGSANLWVPCITC-TSPACYTHKTFNPQNSSSFREVGSPITIFYGSGIIQGFLGSDTVRIGNLVSPEQSFGLSLEEYG--FDSLPFDGILGLAFPAMGIEDTIPIFDNL 192          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PEPA_CALJA (Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.197e-20
Identity = 56/136 (41.18%), Postives = 73/136 (53.68%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNM 721
            L N++D +YFG + IGTP+Q FTVIFDTGSSNLWVPS  C  S                      + +I YGTG+++G    D V+VG +   NQ F  +  E       + FDGILGL +  IS   A PV+ N+
Sbjct:   67 LVNYLDMEYFGTIGIGTPAQEFTVIFDTGSSNLWVPSIYC-SSPACTNHNRFNPQESSTYQATSQTLSIAYGTGSMTGILGYDTVQVGGIADTNQIFGLSETEPGSFLYYSPFDGILGLAYPSISSSGATPVFDNI 201          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CARDH_CYNCA (Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.197e-20
Identity = 64/145 (44.14%), Postives = 71/145 (48.97%), Query Frame = 2
Query:  290 DSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            DS + +VAL N  D  YFGE+ IGTP Q FTVIFDTGSS LWVPS+K +                                   S + S      G    K QDFIEAT E    FL   FDGILGL FQ IS    +PVWYNML
Sbjct:    1 DSGSAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKAH-----------------------------------SMYESS-----GSSTYKEQDFIEATDETDNVFLHRLFDGILGLSFQTIS----VPVWYNML 101          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PAG2_PIG (Pregnancy-associated glycoprotein 2 OS=Sus scrofa GN=PAG2 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.748e-20
Identity = 53/126 (42.06%), Postives = 69/126 (54.76%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI 691
            L N++D  Y G +SIGTP Q F+V+FDTGSS+LWVPS  C                     R G S  ++YG+G +SGF  QD V++G L    Q F  + +E    F  A FDGILGL +  I+I
Sbjct:   68 LRNYLDMVYVGNISIGTPPQQFSVVFDTGSSDLWVPSIYCKSKACVTHRSFNPSHSSTFHDR-GKSIKLEYGSGKMSGFLGQDTVRIGQLTSTGQAFGLSKEETGKAFEHAIFDGILGLAYPSIAI 192          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PEPA_SUNMU (Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 6.392e-20
Identity = 56/136 (41.18%), Postives = 71/136 (52.21%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNM 721
            L N+MD +YFG + IGTP Q FTVIFDTGSSNLWVPS  C  S                      + +I YGTG+++G    D V+V  +   NQ F  +  E       + FDGILGL +  I+   A PV+ NM
Sbjct:   67 LVNYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYC-SSPACSNHNRFNPQKSSTFQSTSQTLSIAYGTGSMTGVLGYDTVQVAGIADTNQIFGLSQTEPGSFLYYSPFDGILGLAYPNIASSGATPVFDNM 201          
The following BLAST results are available for this feature:
BLAST of DR404975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
PEPA_RHIFE7.551e-2141.18Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 ... [more]
PEPC_MONDO9.862e-2137.96Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV... [more]
PEPA_SORUN9.862e-2142.65Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1[more]
CHYM_SHEEP1.288e-2036.99Chymosin OS=Ovis aries GN=CYM PE=2 SV=1[more]
CHYM_BOVIN1.288e-2037.67Chymosin OS=Bos taurus GN=CYM PE=1 SV=3[more]
PAG2_BOVIN1.682e-2036.21Pregnancy-associated glycoprotein 2 OS=Bos taurus ... [more]
PEPA_CALJA2.197e-2041.18Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1[more]
CARDH_CYNCA2.197e-2044.14Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 ... [more]
PAG2_PIG3.748e-2042.06Pregnancy-associated glycoprotein 2 OS=Sus scrofa ... [more]
PEPA_SUNMU6.392e-2041.18Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCSAA-PNP1239P21 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone CSAA-PNP1239P21 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404975 ID=DR404975; Name=DR404975; organism=Citrus sinensis; type=EST; length=741bp
GGGGGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTGTCTGTGCTCT
TTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATTCGG
GTTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTTGCC
AAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGATCAGA
TCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGATGAGA
ACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGATAC
TGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGGAGG
TTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACAGGA
AGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTCTTG
CTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAAGGA
ATGGGGCATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGTTTC
TTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCAGGA
TTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCAAGT
TTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAATTGGAAAAGCC
ATTCCAGTCTGGTATAATATGCTTTGATTAAGGTCTCGTTA
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