DR404975

Overview
NameDR404975
Unique NameDR404975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6928 contig Csv1_Contig6928:14..754. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PAG_HORSE (Pregnancy-associated glycoprotein OS=Equus caballus GN=PAG PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.392e-20
Identity = 54/144 (37.50%), Postives = 74/144 (51.39%), Query Frame = 2
Query:  290 DSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNM 721
            DS      + N++D  Y G +S+GTP Q F VIFDTGS++LWVPS  C  S                   +G    + YGTG +SGF   D +K+  LV +NQ F  + +E       A FDGILGL +  +S+    PV+ N+
Sbjct:   58 DSGVAFEPMRNYLDIAYMGIISVGTPPQEFQVIFDTGSADLWVPSIYC-SSPACSNHNTFNPLRSSTFVASGQPIKLIYGTGKMSGFVGYDTIKISSLVDRNQAFGLSVEEPDKILELATFDGILGLSYPSLSVKGVTPVFDNL 200          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PLM1_PLAFA (Plasmepsin-1 OS=Plasmodium falciparum PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 65/224 (29.02%), Postives = 109/224 (48.66%), Query Frame = 2
Query:  107 LFLFLILSPAAFALPNDGLVRIGLRKKKLDQINR-----LVGQTVSKEEETMRTPVRRYNLHGSLGDS----------------DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASI--TFLAAKFDGILGLGFQEISIGKAIPV 709
            +F FL+++ A F    D +  +  + KK+++I       ++G ++    + +   V+++ L   + +S                  D V LN+  +  Y+GE  IG   Q F  IFDTGS+NLWVPSA+C  ++                 ++G    + Y +G +SGFFS+D V + +L    + FIE T        +   +FDGI+GLG++++SIG   PV
Sbjct:   43 VFFFLLITGALFYYLIDNV--LFPKNKKINEIMNTSKHVIIGFSIENSHDRIMKTVKQHRLKNYIKESLKFFKTGLTQKPHLGNAGDSVTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN-TIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFSKDIVTIANLSFPYK-FIEVTDTNGFEPAYTLGQFDGIVGLGWKDLSIGSVDPV 262          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PLM1_PLAF7 (Plasmepsin-1 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0076 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 65/224 (29.02%), Postives = 109/224 (48.66%), Query Frame = 2
Query:  107 LFLFLILSPAAFALPNDGLVRIGLRKKKLDQINR-----LVGQTVSKEEETMRTPVRRYNLHGSLGDS----------------DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASI--TFLAAKFDGILGLGFQEISIGKAIPV 709
            +F FL+++ A F    D +  +  + KK+++I       ++G ++    + +   V+++ L   + +S                  D V LN+  +  Y+GE  IG   Q F  IFDTGS+NLWVPSA+C  ++                 ++G    + Y +G +SGFFS+D V + +L    + FIE T        +   +FDGI+GLG++++SIG   PV
Sbjct:   43 VFFFLLITGALFYYLIDNV--LFPKNKKINEIMNTSKHVIIGFSIENSHDRIMKTVKQHRLKNYIKESLKFFKTGLTQKPHLGNAGDSVTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN-TIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFSKDIVTIANLSFPYK-FIEVTDTNGFEPAYTLGQFDGIVGLGWKDLSIGSVDPV 262          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PEP2B_GADMO (Pepsin-2B OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.429e-19
Identity = 54/136 (39.71%), Postives = 71/136 (52.21%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNM 721
            + N  D +Y+G +SIGTP ++F VIFDTGSSNLWV S+ C  +                    G +  + YGTG + G   QD V VG     NQ+  E+  E      AA FDGILGL +  I+   A+PV+ NM
Sbjct:    6 MKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHC-SAQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMRGILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNM 140          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PLM2_PLAFA (Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.068e-19
Identity = 53/141 (37.59%), Postives = 78/141 (55.32%), Query Frame = 2
Query:  293 SDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEA--TKEASITFLAAKFDGILGLGFQEISIGKAIPV 709
            S  D + L +F +  ++G+  +G   Q FT I DTGS+NLWVPS KC  +                  ++G    + Y +G +SGFFS+D V VG+L +  + FIE   T     T+ A+ FDGILGLG++++SIG   P+
Sbjct:  125 SSNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKC-TTAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSGTVSGFFSKDLVTVGNLSLPYK-FIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPI 263          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PEPB_CANFA (Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.686e-18
Identity = 48/135 (35.56%), Postives = 72/135 (53.33%), Query Frame = 2
Query:  320 NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            N++D+ YFGE+SIGTP Q F ++FDTGSSNLWVPS  C  S                   +  +  + YG G+++     D V V ++V+ NQ F  +  E +  F  + FDGILG+ +  +++     V  NM+
Sbjct:   68 NYLDSYYFGEISIGTPPQNFLILFDTGSSNLWVPSTYCQ-SQACSNHNRFNPSRSSTYQSSEQTYTLAYGFGSLTVLLGYDTVTVQNIVIHNQLFGMSENEPNYPFYYSYFDGILGMAYSNLAVDNGPTVLQNMM 201          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PEPAF_RABIT (Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.274e-17
Identity = 55/152 (36.18%), Postives = 73/152 (48.03%), Query Frame = 2
Query:  266 YNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNM 721
            Y L     D D     L N++D  Y G +SIGTP Q F V+ DTGS++LWVPS  C  S                   +G    I YG+G +SGF + D V++  LV   Q F  + +E       A FDGILGL +  +S     PV+ N+
Sbjct:   50 YKLLSGQQDPDVSFEPLRNYLDLAYIGIISIGTPPQEFKVVLDTGSADLWVPSIYC-SSPACGKHNTFNPLLSSTFLVSGRPINIVYGSGRMSGFLAYDTVQIAGLVDVAQAFGLSLQEPGKFMEYAVFDGILGLSYPSLSFEGITPVFDNL 200          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PAG1_PIG (Pregnancy-associated glycoprotein 1 OS=Sus scrofa GN=PAG1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.274e-17
Identity = 51/155 (32.90%), Postives = 78/155 (50.32%), Query Frame = 2
Query:  257 VRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNM 721
            ++++ L GSL       + L N++D  Y G ++IGTP Q F+VIFDT SS+LWVPS +C+                     N  +  +   +G +SG    D V++G    +NQ F  +  E       A FDG+LGLG+  ++I    PV+ N+
Sbjct:   49 IQKFGLKGSLCSPKISCLRLWNYLDMVYVGNITIGTPPQLFSVIFDTASSDLWVPSNQCHSRACVTHRSFNPTLSSTFQSSN-RTVKLAPHSGLVSGLLGYDTVQIGRFKSENQAFGLSQSEPVKELENAFFDGVLGLGYPSLAIQGTTPVFDNL 202          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PAG1_SHEEP (Pregnancy-associated glycoprotein 1 OS=Ovis aries GN=PAG1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.288e-16
Identity = 53/142 (37.32%), Postives = 72/142 (50.70%), Query Frame = 2
Query:  293 SDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSV--XXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            S+  I  L N MD  Y G ++IGTP Q F V+FDTGSS+L VPS  C                           +  I +G+G + GF + D V++GDLV  +Q F     E   ++L   FDGILGL + +IS   AIP++
Sbjct:   56 SNLTIHPLRNIMDMLYVGNITIGTPPQEFQVVFDTGSSDLLVPSINCLSPTKRPCSKQDKFKHHQSSTFRFTNDTFRIYFGSGTMRGFVAHDTVRIGDLVSTDQPFGLIFLE---SWLDIPFDGILGLNYPKISFSGAIPIF 194          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: ASP6_CAEEL (Aspartic protease 6 OS=Caenorhabditis elegans GN=asp-6 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.248e-15
Identity = 51/142 (35.92%), Postives = 68/142 (47.89%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVG-----DLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            +N+F D +Y G ++IGTP Q F V+ DTGSSNLW+P   C                     +NG S  IQYG+G  +G   QD V+ G      L V    F  A+K  S  F     DGILGL F  +++   +P   N +
Sbjct:   63 VNDFGDFEYLGNITIGTPDQGFIVVLDTGSSNLWIPGPTC--KTNCKTKSKFDSTASSTFVKNGKSWTIQYGSGDAAGILGQDTVRFGAKGDSQLSVPTTTFGIASK-ISADFKNDATDGILGLAFTSLAVDGVVPPLINAI 201          
The following BLAST results are available for this feature:
BLAST of DR404975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
PAG_HORSE6.392e-2037.50Pregnancy-associated glycoprotein OS=Equus caballu... [more]
PLM1_PLAFA1.860e-1929.02Plasmepsin-1 OS=Plasmodium falciparum PE=1 SV=2[more]
PLM1_PLAF71.860e-1929.02Plasmepsin-1 OS=Plasmodium falciparum (isolate 3D7... [more]
PEP2B_GADMO2.429e-1939.71Pepsin-2B OS=Gadus morhua PE=1 SV=1[more]
PLM2_PLAFA7.068e-1937.59Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1[more]
PEPB_CANFA2.686e-1835.56Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1[more]
PEPAF_RABIT2.274e-1736.18Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1[more]
PAG1_PIG2.274e-1732.90Pregnancy-associated glycoprotein 1 OS=Sus scrofa ... [more]
PAG1_SHEEP4.288e-1637.32Pregnancy-associated glycoprotein 1 OS=Ovis aries ... [more]
ASP6_CAEEL1.248e-1535.92Aspartic protease 6 OS=Caenorhabditis elegans GN=a... [more]

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Properties
Property NameValue
Genbank descriptionCSAA-PNP1239P21 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone CSAA-PNP1239P21 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404975 ID=DR404975; Name=DR404975; organism=Citrus sinensis; type=EST; length=741bp
GGGGGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTGTCTGTGCTCT
TTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATTCGG
GTTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTTGCC
AAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGATCAGA
TCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGATGAGA
ACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGATAC
TGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGGAGG
TTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACAGGA
AGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTCTTG
CTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAAGGA
ATGGGGCATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGTTTC
TTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCAGGA
TTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCAAGT
TTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAATTGGAAAAGCC
ATTCCAGTCTGGTATAATATGCTTTGATTAAGGTCTCGTTA
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