DR404961

Overview
NameDR404961
Unique NameDR404961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CATD_CHICK (Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.060e-37
Identity = 76/150 (50.67%), Postives = 98/150 (65.33%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYF-SVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            L N+MDAQY+GE+ IGTP Q FTV+FDTGSSNLWVPS  C+   +                  NG   AI YGTG++SGF SQD V +G+L +KNQ F EA K+  ITF+AAKFDGILG+ F  IS+ K  P + N++   L+++ +FSF
Sbjct:   70 LKNYMDAQYYGEIGIGTPPQKFTVVFDTGSSNLWVPSVHCHLLDIACLLHHKYDASKSSTYVENGTEFAIHYGTGSLSGFLSQDTVTLGNLKIKNQIFGEAVKQPGITFIAAKFDGILGMAFPRISVDKVTPFFDNVMQQKLIEKNIFSF 219          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CATD_RAT (Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.350e-36
Identity = 86/211 (40.76%), Postives = 124/211 (58.77%), Query Frame = 2
Query:  152 NDGLVRIGLRKKKLDQINRLVGQTV-SKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKV------GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            +  L+RI LRK     I R + +   S E+  ++ P+ +Y++  S    +     L N++DAQY+GE+ IGTP Q FTV+FDTGSSNLWVPS  C    +                 +NG S  I YG+G++SG+ SQD V V      G + V+ Q F EATK+  + F+AAKFDGILG+G+  IS+ K +PV+ N++   LV++ +FSF
Sbjct:   18 SSALIRIPLRK--FTSIRRTMTEVGGSVEDLILKGPITKYSMQSSPRTKEPVSELLKNYLDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWVHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSDLGGIKVEKQIFGEATKQPGVVFIAAKFDGILGMGYPFISVNKVLPVFDNLMKQKLVEKNIFSF 226          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 3.008e-36
Identity = 73/150 (48.67%), Postives = 100/150 (66.67%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFS-VXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            L+N++DAQY+G ++IGTP Q+F V+FDTGSSNLWVPS +C F+ +                 +NG +  IQYG+G++SG+ S D V +G + V  Q F EA  E  + F+AAKFDGILGLG+  IS+   +PV+YNM + GL+  PVFSF
Sbjct:   60 LSNYLDAQYYGAITIGTPPQSFKVVFDTGSSNLWVPSKECSFTNIACLMHNKYNAKKSSTFEKNGTAFHIQYGSGSLSGYLSTDTVGLGGVSVTKQTFAEAINEPGLVFVAAKFDGILGLGYSSISVDGVVPVFYNMFNQGLIDAPVFSF 209          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.546e-35
Identity = 88/231 (38.10%), Postives = 131/231 (56.71%), Query Frame = 2
Query:  101 VALFLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTV-SKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNV---------KVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            V L +  +L+ ++FA+     +RI LRK     I R + +   S E+  ++ P+ +Y++  S   ++     L N++DAQY+G++ IGTP Q FTV+FDTGSSNLWVPS  C    +                 +NG S  I YG+G++SG+ SQD V         K   + V+ Q F EATK+  I F+AAKFDGILG+G+  IS+   +PV+ N++   LV + +FSF
Sbjct:    6 VLLLILGLLASSSFAI-----IRIPLRK--FTSIRRTMTEVGGSVEDLILKGPITKYSMQSSPKTTEPVSELLKNYLDAQYYGDIGIGTPPQCFTVVFDTGSSNLWVPSIHCKILDIACWVHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSDQSKARGIKVEKQIFGEATKQPGIVFVAAKFDGILGMGYPHISVNNVLPVFDNLMQQKLVDKNIFSF 229          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CARP_NEUCR (Vacuolar protease A OS=Neurospora crassa GN=pep-4 PE=3 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 4.343e-35
Identity = 72/151 (47.68%), Postives = 98/151 (64.90%), Query Frame = 2
Query:  308 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            V + NFM+AQYF E++IGTP QTF V+ DTGSSNLWVPS++C  S+                 +NG S  I+YG+G++SGF SQD + +GD+ + +Q F EAT E  + F   +FDGILGLG+  I++    P +Y M++  LV EPVFSF
Sbjct:   75 VPITNFMNAQYFSEITIGTPPQTFKVVLDTGSSNLWVPSSQCG-SIACYLHNKYESSESSTYKKNGTSFKIEYGSGSLSGFVSQDRMTIGDITINDQLFAEATSEPGLAFAFGRFDGILGLGYDRIAVNGITPPFYKMVEQKLVDEPVFSF 224          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.408e-35
Identity = 90/227 (39.65%), Postives = 121/227 (53.30%), Query Frame = 2
Query:  119 LILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETM-RTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKV-----------GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            L L+    A P   LVRI L K     I R + +     E+ + + PV +Y+              L N+MDAQY+GE+ IGTP Q FTV+FDTGSSNLWVPS  C    +                 +NG S  I YG+G++SG+ SQD V V           G + V+ Q F EATK+  ITF+AAKFDGILG+ +  IS+   +PV+ N++   LV + +FSF
Sbjct:    7 LPLALCLLAAPASALVRIPLHK--FTSIRRTMSEVGGSVEDLIAKGPVSKYSQAVPAVTEGPIPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQSASSASALGGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSF 231          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CATD_CANFA (Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.802e-34
Identity = 87/225 (38.67%), Postives = 120/225 (53.33%), Query Frame = 2
Query:  119 LILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETM-RTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKV---------GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            L+L     A P   LVRI L K     + R + +     E+ + + P+ +Y               L N+MDAQY+GE+ IGTP Q FTV+FDTGSSNLWVPS  C    +                 +NG S  I YG+G++SG+ SQD V V           + V+ Q F EATK+  ITF+AAKFDGILG+ +  IS+   +PV+ N++   LV++ +FSF
Sbjct:    7 LLLVLGLLAAPAAALVRIPLHK--FTSVRRTMTELGGPVEDLIAKGPISKYAQGAPAVTGGPIPEMLRNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSALSGLAGIKVERQTFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVEKNIFSF 229          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CARP_YEAST (Saccharopepsin OS=Saccharomyces cerevisiae GN=PEP4 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.397e-33
Identity = 70/151 (46.36%), Postives = 94/151 (62.25%), Query Frame = 2
Query:  308 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            V L N+++AQY+ ++++GTP Q F VI DTGSSNLWVPS +C  S+                  NG   AIQYGTG++ G+ SQD + +GDL +  QDF EAT E  +TF   KFDGILGLG+  IS+ K +P +YN +   L+ E  F+F
Sbjct:   81 VPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSLEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAF 230          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: RENI_MACMU (Renin OS=Macaca mulatta GN=REN PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 3.112e-33
Identity = 81/220 (36.82%), Postives = 123/220 (55.91%), Query Frame = 2
Query:  113 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLV---GQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            L L+     F LP D      +  K++  I   +   G  +++       P++R     +LG++ + ++ L N+MD QY+GE+ IGTP QTF V+FDTGSSN+WVPS+KC                       NG    ++Y TG +SGF SQD + VG + V  Q F E T+  ++ F+ A+FDG++G+GF E +IG+  P++ N+L  G++KE VFSF
Sbjct:   13 LLLLWGSCTFGLPTDTTTFKRIFLKRMPSIRESLKERGVDMARLGPEWSQPMKRL----ALGNTTSSVI-LTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNILSQGVLKEDVFSF 226          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: RENI_MACFA (Renin OS=Macaca fascicularis GN=REN PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.112e-33
Identity = 81/220 (36.82%), Postives = 123/220 (55.91%), Query Frame = 2
Query:  113 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLV---GQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            L L+     F LP D      +  K++  I   +   G  +++       P++R     +LG++ + ++ L N+MD QY+GE+ IGTP QTF V+FDTGSSN+WVPS+KC                       NG    ++Y TG +SGF SQD + VG + V  Q F E T+  ++ F+ A+FDG++G+GF E +IG+  P++ N+L  G++KE VFSF
Sbjct:   13 LLLLWGSCTFGLPTDTTTFKRIFLKRMPSIRESLKERGVDMARLGPEWSQPMKRL----ALGNTTSSVI-LTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNILSQGVLKEDVFSF 226          
The following BLAST results are available for this feature:
BLAST of DR404961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
CATD_CHICK6.060e-3750.67Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1[more]
CATD_RAT1.350e-3640.76Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1[more]
ASPP_AEDAE3.008e-3648.67Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
CATD_MOUSE2.546e-3538.10Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1[more]
CARP_NEUCR4.343e-3547.68Vacuolar protease A OS=Neurospora crassa GN=pep-4 ... [more]
CATD_HUMAN7.408e-3539.65Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]
CATD_CANFA4.802e-3438.67Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1[more]
CARP_YEAST1.397e-3346.36Saccharopepsin OS=Saccharomyces cerevisiae GN=PEP4... [more]
RENI_MACMU3.112e-3336.82Renin OS=Macaca mulatta GN=REN PE=2 SV=2[more]
RENI_MACFA3.112e-3336.82Renin OS=Macaca fascicularis GN=REN PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCSAA-PNP1239P05 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone CSAA-PNP1239P05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404961 ID=DR404961; Name=DR404961; organism=Citrus sinensis; type=EST; length=762bp
GGGGGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTGTCTGTGCTCT
TTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATTCGG
GTTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTTGCC
AAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGATCAGA
TCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGATGAGA
ACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGATAC
TGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGGAGG
TTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACAGGA
AGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTCTTG
CTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAAGGA
ATGGGGCATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGTTTC
TTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCAGGA
TTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCAAGT
TTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAATTGGAAAAGCC
ATTCCAGTCTGGTATAATATGCTTGATTAAGGTCTCGTTAAAGAACCAGT
TTTTTCATTTTG
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