DR404961

Overview
NameDR404961
Unique NameDR404961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CATD_SHEEP (Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.805e-31
Identity = 70/159 (44.03%), Postives = 95/159 (59.75%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKV---------GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            L N+MDAQY+GE+ IGTP Q FTV+FDTGS+NLWVPS  C    +                 +NG +  I YG+G++SG+ SQD V V         G + V+ Q F EA K+  + F+AAKFDGILG+ +  IS+   +PV+ N++   LV + VFSF
Sbjct:   46 LTNYMDAQYYGEIGIGTPPQCFTVVFDTGSANLWVPSIHCKLLDIACWVHHKYNSDKSSTYVKNGTTFDIHYGSGSLSGYLSQDTVSVPCNPSSSSPGGVTVQRQTFGEAIKQPGVVFIAAKFDGILGMAYPRISVNNVLPVFDNLMRQKLVDKNVFSF 204          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: RENI2_MOUSE (Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.446e-30
Identity = 81/216 (37.50%), Postives = 118/216 (54.63%), Query Frame = 2
Query:  113 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFS 757
            L L+ SP  F+LP  G     +  KK+  +  ++ +    +   +      +    SL D  + +V L N++++QY+GE+ IGTP QTF VIFDTGS+NLWVPS KC    +                  NG    I YG+G + GF SQD+V VG + V  Q F E T+   I F+ A+FDG+LG+GF   ++G   PV+ ++L  G++KE VFS
Sbjct:   11 LLLLWSPCTFSLPT-GTTFERIPLKKMPSVREILEER-GVDMTRLSAEWDVFTKRSSLTDLISPVV-LTNYLNSQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGDDFTIHYGSGRVKGFLSQDSVTVGGITV-TQTFGEVTELPLIPFMLAQFDGVLGMGFPAQAVGGVTPVFDHILSQGVLKEKVFS 222          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CARDF_CYNCA (Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.446e-30
Identity = 79/157 (50.32%), Postives = 92/157 (58.60%), Query Frame = 2
Query:  290 DSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            DS + +VAL N  D  Y+GE+ IGTP Q FTVIFDTGSS LWVPS+K +                             Y +   S + SQD+V +GDLVVK QDFIEAT+EA   FL   FDGILGL FQ IS    +PVWYNML+ GLVK   FSF
Sbjct:    2 DSGSAVVALTNDRDTSYYGEIGIGTPPQKFTVIFDTGSSVLWVPSSKAHS---------------------------MYESSGSSTYKSQDSVTIGDLVVKEQDFIEATEEADNVFLNRLFDGILGLSFQTIS----VPVWYNMLNQGLVKR--FSF 125          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: RENI_CANFA (Renin OS=Canis familiaris GN=REN PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.207e-30
Identity = 69/156 (44.23%), Postives = 93/156 (59.62%), Query Frame = 2
Query:  293 SDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCY-FSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFS 757
            + T  V L N++D QY+GE+ IGTP QTF V+FDTGS+NLWVPS +C                       NG +  I+YG+G + GF SQD V VG + V  Q F E T+   I F+ AKFDG+LG+GF   ++G   PV+ ++L  G++KE VFS
Sbjct:   70 NSTSPVVLTNYLDTQYYGEIGIGTPPQTFKVVFDTGSANLWVPSTRCSPLYTACEIHCLYDSSESSSYMENGTTFTIRYGSGKVKGFLSQDMVTVGGITV-TQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVGGVTPVFDHILSQGVLKEEVFS 224          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: NAPSA_HUMAN (Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.494e-30
Identity = 70/152 (46.05%), Postives = 90/152 (59.21%), Query Frame = 2
Query:  308 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            V L+N+ D QYFGE+ +GTP Q FTV FDTGSSNLWVPS +C +FSV                  NG   AIQYGTG + G  S+D + +G +   +  F EA  E S+ F  A FDGILGLGF  +S+    P    +++ GL+ +PVFSF
Sbjct:   68 VPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRFDPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAFAHFDGILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFSF 219          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: RENI_RAT (Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 7.175e-30
Identity = 80/219 (36.53%), Postives = 117/219 (53.42%), Query Frame = 2
Query:  113 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLV---GQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFS 757
            L L+ +  +F+LP D      +  KK+  +  ++   G  +++        +++ +       + T  V L N++D QY+GE+ IGTPSQTF VIFDTGS+NLWVPS KC                       NG    I YG+G + GF SQD V VG ++V  Q F E T+   I F+ AKFDG+LG+GF   ++   IPV+ ++L   ++KE VFS
Sbjct:   11 LLLLWTSCSFSLPTDTASFGRILLKKMPSVREILEERGVDMTRISAEWGEFIKKSSF-----TNVTSPVVLTNYLDTQYYGEIGIGTPSQTFKVIFDTGSANLWVPSTKCGPLYTACEIHNLYDSSESSSYMENGTEFTIHYGSGKVKGFLSQDVVTVGGIIV-TQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVDGVIPVFDHILSQRVLKEEVFS 223          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: PEPA1_RABIT (Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.088e-29
Identity = 71/149 (47.65%), Postives = 89/149 (59.73%), Query Frame = 2
Query:  311 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFS 757
            +L N++DA+YFG +SIGTP Q FTVIFDTGSSNLWVPS  C  S+                     + +I YGTG+++G    D VKVG++   NQ F  +  E  ITFL A FDGILGL +  IS   A PV+ NM + GLV E +FS
Sbjct:   66 SLENYLDAEYFGTISIGTPPQEFTVIFDTGSSNLWVPSTYCS-SLACFLHKRFNPDDSSTFQATSETLSITYGTGSMTGILGYDTVKVGNIEDTNQIFGLSKTEPGITFLVAPFDGILGLAYPSISASDATPVFDNMWNEGLVSEDLFS 213          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CATE_RAT (Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 3.561e-29
Identity = 70/148 (47.30%), Postives = 89/148 (60.14%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFS 757
            L N++D +YFG VSIG+PSQ FTVIFDTGSSNLWVPS  C  S                    G   +IQYGTG+++G    D V V  L V+ Q F E+ KE   TF+ A+FDGILGLG+  +++G   PV+ NM+   LV  P+FS
Sbjct:   72 LINYLDMEYFGTVSIGSPSQNFTVIFDTGSSNLWVPSVYCT-SPACKAHPVFHPSQSSTYMEVGNHFSIQYGTGSLTGIIGADQVSVEGLTVEGQQFGESVKEPGQTFVNAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVALPMFS 218          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: PEPA2_RABIT (Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.767e-28
Identity = 69/149 (46.31%), Postives = 89/149 (59.73%), Query Frame = 2
Query:  311 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFS 757
            ++ N++DA+YFG +SIGTP Q FTVIFDTGSSNLWVPS  C  S+                     + +I YGTG+++G    D VKVG +   NQ F  +  E S+TFL A FDGILGL +  IS   A PV+ NM + GLV + +FS
Sbjct:   66 SMENYLDAEYFGTISIGTPPQDFTVIFDTGSSNLWVPSTYCS-SLACALHKRFNPEDSSTYQGTSETLSITYGTGSMTGILGYDTVKVGSIEDTNQIFGLSKTEPSLTFLFAPFDGILGLAYPSISSSDATPVFDNMWNEGLVSQDLFS 213          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CATE_RANCA (Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.308e-28
Identity = 72/199 (36.18%), Postives = 106/199 (53.27%), Query Frame = 2
Query:  158 GLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVF 754
            G++R+ L+++K   + +++ +         +       L  S    +T    L N++D +YFG++SIGTP Q FTVIFDTGSSNLWVPS  C  S                   NG +  IQYGTG ++G    D V V  + V++Q F E+  E   TF  + FDGILGL +  +++   IPV+ NM+   LV+ P+F
Sbjct:   16 GIIRVPLKRQK--SMRKILKEKGKLSHLWTKQGNEFLQLSDSCSSPETASEPLMNYLDVEYFGQISIGTPPQQFTVIFDTGSSNLWVPSIYCT-SQACTKHNRYRPSESTTYVSNGEAFFIQYGTGNLTGILGIDQVTVQGITVQSQTFAESVSEPGSTFQDSNFDGILGLAYPNLAVDNCIPVFDNMIAQNLVELPLF 211          
The following BLAST results are available for this feature:
BLAST of DR404961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
CATD_SHEEP3.805e-3144.03Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 ... [more]
RENI2_MOUSE1.446e-3037.50Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1[more]
CARDF_CYNCA1.446e-3050.32Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 ... [more]
RENI_CANFA4.207e-3044.23Renin OS=Canis familiaris GN=REN PE=2 SV=1[more]
NAPSA_HUMAN5.494e-3046.05Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1[more]
RENI_RAT7.175e-3036.53Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2[more]
PEPA1_RABIT2.088e-2947.65Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1[more]
CATE_RAT3.561e-2947.30Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3[more]
PEPA2_RABIT1.767e-2846.31Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
CATE_RANCA2.308e-2836.18Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCSAA-PNP1239P05 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone CSAA-PNP1239P05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404961 ID=DR404961; Name=DR404961; organism=Citrus sinensis; type=EST; length=762bp
GGGGGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTGTCTGTGCTCT
TTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATTCGG
GTTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTTGCC
AAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGATCAGA
TCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGATGAGA
ACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGATAC
TGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGGAGG
TTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACAGGA
AGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTCTTG
CTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAAGGA
ATGGGGCATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGTTTC
TTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCAGGA
TTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCAAGT
TTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAATTGGAAAAGCC
ATTCCAGTCTGGTATAATATGCTTGATTAAGGTCTCGTTAAAGAACCAGT
TTTTTCATTTTG
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