DR404961

Overview
NameDR404961
Unique NameDR404961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6928 contig Csv1_Contig6928:14..775. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: PEPC_CAVPO (Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.920e-23
Identity = 57/146 (39.04%), Postives = 84/146 (57.53%), Query Frame = 2
Query:  320 NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFS 757
            ++MDA YFG++S+GTP Q+F V+FDTGSSNLWVPS  C  S+                     S +++YGTG+++G F  D + + D+ V  Q+F  +  E    F+ A+FDGILGLG+  +S G A      +L  G + + +FS
Sbjct:   73 SYMDAAYFGQISLGTPPQSFQVLFDTGSSNLWVPSVYC-SSLACTTHTRFNPRDSSTYVATDQSFSLEYGTGSLTGVFGYDTMTIQDIQVPKQEFGLSETEPGSDFVYAEFDGILGLGYPGLSEGGATTAMQGLLREGALSQSLFS 217          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: PEPA_RHIFE (Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.920e-23
Identity = 61/148 (41.22%), Postives = 79/148 (53.38%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFS 757
            L N+MD +YFG + IGTP Q FTVIFDTGSSNLWVPS  C                      N    ++ YGTG+++G    D V+VG +   NQ F  +  E       A FDGILGL +  I+   A PV+ N+ + GLV + +FS
Sbjct:   66 LENYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYCSSPACSNHNRFNPQQSSTYQGTN-QKLSVAYGTGSMTGILGYDTVQVGGITDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSIASSGATPVFDNIWNQGLVSQDLFS 212          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CARDG_CYNCA (Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.920e-23
Identity = 71/157 (45.22%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  290 DSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            DS + +VAL N  D  YFGE+ IGTP Q FTVIFDTGSS LWVPS+K +                                   S + S D+        K QDFIEAT+EA   FL   FDGILGL FQ IS    +PVWYNM++ GLVK   FSF
Sbjct:    1 DSGSTVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSYLWVPSSKAH-----------------------------------SMYESSDS-----STYKEQDFIEATEEADNVFLNRLFDGILGLSFQTIS----VPVWYNMVNQGLVKR--FSF 111          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: PEPA_SORUN (Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.814e-23
Identity = 63/148 (42.57%), Postives = 80/148 (54.05%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFS 757
            L N+MD +YFG +SIGTP Q FTVIFDTGSSNLWVPS  C  S                      + +I YGTG+++G    D V+V  +   NQ F  +  E       + FDGILGL +  IS   A PV+ NM + GLV + +FS
Sbjct:   67 LVNYMDMEYFGTISIGTPPQEFTVIFDTGSSNLWVPSIYC-SSPACSNHNRFDPQKSSTFKPTSQTVSIAYGTGSMTGVLGYDTVQVAGIADTNQIFGLSQSEPGSFLYYSPFDGILGLAYPSISSSGATPVFDNMWNQGLVSQDLFS 213          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CHYM_SHEEP (Chymosin OS=Ovis aries GN=CYM PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.496e-23
Identity = 59/157 (37.58%), Postives = 87/157 (55.41%), Query Frame = 2
Query:  287 GDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFS 757
            G  +   V L N++D+QYFG++ +GTP Q FTV+FDTGSS+ WVPS  C  S                    G   +I+YGTG++ G    D V V ++V   Q    +T+E    F  A+FDGILG+ +  ++   ++PV+ NM+D  LV + +FS
Sbjct:   57 GFGEVASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIRYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLASEYSVPVFDNMMDRRLVAQDLFS 212          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: PAG2_PIG (Pregnancy-associated glycoprotein 2 OS=Sus scrofa GN=PAG2 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.110e-22
Identity = 60/149 (40.27%), Postives = 79/149 (53.02%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            L N++D  Y G +SIGTP Q F+V+FDTGSS+LWVPS  C                     R G S  ++YG+G +SGF  QD V++G L    Q F  + +E    F  A FDGILGL +  I+I     V  N+     + EPVF+F
Sbjct:   68 LRNYLDMVYVGNISIGTPPQQFSVVFDTGSSDLWVPSIYCKSKACVTHRSFNPSHSSTFHDR-GKSIKLEYGSGKMSGFLGQDTVRIGQLTSTGQAFGLSKEETGKAFEHAIFDGILGLAYPSIAIKGTTTVIDNLKKQDQISEPVFAF 215          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CARDH_CYNCA (Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.449e-22
Identity = 71/157 (45.22%), Postives = 79/157 (50.32%), Query Frame = 2
Query:  290 DSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            DS + +VAL N  D  YFGE+ IGTP Q FTVIFDTGSS LWVPS+K +                                   S + S      G    K QDFIEAT E    FL   FDGILGL FQ IS    +PVWYNML+ GLVK   FSF
Sbjct:    1 DSGSAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKAH-----------------------------------SMYESS-----GSSTYKEQDFIEATDETDNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKR--FSF 111          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: PEPA_SUNMU (Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.472e-22
Identity = 61/148 (41.22%), Postives = 79/148 (53.38%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFS 757
            L N+MD +YFG + IGTP Q FTVIFDTGSSNLWVPS  C  S                      + +I YGTG+++G    D V+V  +   NQ F  +  E       + FDGILGL +  I+   A PV+ NM + GLV + +FS
Sbjct:   67 LVNYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYC-SSPACSNHNRFNPQKSSTFQSTSQTLSIAYGTGSMTGVLGYDTVQVAGIADTNQIFGLSQTEPGSFLYYSPFDGILGLAYPNIASSGATPVFDNMWNQGLVSQDLFS 213          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: PAG_HORSE (Pregnancy-associated glycoprotein OS=Equus caballus GN=PAG PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.472e-22
Identity = 58/157 (36.94%), Postives = 83/157 (52.87%), Query Frame = 2
Query:  290 DSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            DS      + N++D  Y G +S+GTP Q F VIFDTGS++LWVPS  C  S                   +G    + YGTG +SGF   D +K+  LV +NQ F  + +E       A FDGILGL +  +S+    PV+ N+ + GL+ + +F+F
Sbjct:   58 DSGVAFEPMRNYLDIAYMGIISVGTPPQEFQVIFDTGSADLWVPSIYCS-SPACSNHNTFNPLRSSTFVASGQPIKLIYGTGKMSGFVGYDTIKISSLVDRNQAFGLSVEEPDKILELATFDGILGLSYPSLSVKGVTPVFDNLWNQGLLSQKLFAF 213          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CHYM_BOVIN (Chymosin OS=Bos taurus GN=CYM PE=1 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 3.228e-22
Identity = 59/157 (37.58%), Postives = 86/157 (54.78%), Query Frame = 2
Query:  287 GDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFS 757
            G  +   V L N++D+QYFG++ +GTP Q FTV+FDTGSS+ WVPS  C  S                    G   +I YGTG++ G    D V V ++V   Q    +T+E    F  A+FDGILG+ +  ++   +IPV+ NM++  LV + +FS
Sbjct:   57 GFGEVASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFS 212          
The following BLAST results are available for this feature:
BLAST of DR404961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
PEPC_CAVPO2.920e-2339.04Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1[more]
PEPA_RHIFE2.920e-2341.22Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 ... [more]
CARDG_CYNCA2.920e-2345.22Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 ... [more]
PEPA_SORUN3.814e-2342.57Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1[more]
CHYM_SHEEP8.496e-2337.58Chymosin OS=Ovis aries GN=CYM PE=2 SV=1[more]
PAG2_PIG1.110e-2240.27Pregnancy-associated glycoprotein 2 OS=Sus scrofa ... [more]
CARDH_CYNCA1.449e-2245.22Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 ... [more]
PEPA_SUNMU2.472e-2241.22Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2[more]
PAG_HORSE2.472e-2236.94Pregnancy-associated glycoprotein OS=Equus caballu... [more]
CHYM_BOVIN3.228e-2237.58Chymosin OS=Bos taurus GN=CYM PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionCSAA-PNP1239P05 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone CSAA-PNP1239P05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404961 ID=DR404961; Name=DR404961; organism=Citrus sinensis; type=EST; length=762bp
GGGGGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTGTCTGTGCTCT
TTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATTCGG
GTTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTTGCC
AAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGATCAGA
TCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGATGAGA
ACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGATAC
TGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGGAGG
TTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACAGGA
AGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTCTTG
CTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAAGGA
ATGGGGCATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGTTTC
TTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCAGGA
TTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCAAGT
TTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAATTGGAAAAGCC
ATTCCAGTCTGGTATAATATGCTTGATTAAGGTCTCGTTAAAGAACCAGT
TTTTTCATTTTG
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