DR404960

Overview
NameDR404960
Unique NameDR404960
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: CATEB_XENLA (Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.208e-25
Identity = 67/170 (39.41%), Postives = 90/170 (52.94%), Query Frame = 2
Query:  158 GLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            GL+R+ L+++K   I +   +         +  +       S  +       L N+MD QYFGE+SIGTP Q FTVIFDTGSSNLWVPS  C  S                   NG + ++QYGTG++SG    D+V V  ++V+NQ F E+  E   TF+ A FDGILG
Sbjct:   16 GLIRVPLKRQK--SIRKTPKEKGKLSHVWTQQGIDMVQYTDSCNNDQAPSEPLINYMDVQYFGEISIGTPPQNFTVIFDTGSSNLWVPSVYC-ISPACAQHNRFQPQLSSTYESNGNNFSLQYGTGSLSGVIGIDSVTVEGILVQNQQFGESVSEPGSTFVDASFDGILG 182          
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: CARPV_CANAL (Vacuolar aspartic protease OS=Candida albicans GN=APR1 PE=3 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 3.208e-25
Identity = 58/118 (49.15%), Postives = 73/118 (61.86%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            L N+++AQYF E+ IGTP Q F VI DTGSSNLWVPS  C  S+                  NG+  +IQYG+G++ G+ SQD + +GDLV+  QDF EAT E  + F   KFDGILG
Sbjct:   96 LTNYLNAQYFTEIQIGTPGQPFKVILDTGSSNLWVPSQDCT-SLACFLHAKYDHDASSTYKVNGSEFSIQYGSGSMEGYISQDVLTIGDLVIPGQDFAEATSEPGLAFAFGKFDGILG 212          
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: CATD_SHEEP (Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.473e-25
Identity = 59/128 (46.09%), Postives = 76/128 (59.38%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKV---------GDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            L N+MDAQY+GE+ IGTP Q FTV+FDTGS+NLWVPS  C    +                 +NG +  I YG+G++SG+ SQD V V         G + V+ Q F EA K+  + F+AAKFDGILG
Sbjct:   46 LTNYMDAQYYGEIGIGTPPQCFTVVFDTGSANLWVPSIHCKLLDIACWVHHKYNSDKSSTYVKNGTTFDIHYGSGSLSGYLSQDTVSVPCNPSSSSPGGVTVQRQTFGEAIKQPGVVFIAAKFDGILG 173          
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: CATD_BOVIN (Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 5.473e-25
Identity = 59/128 (46.09%), Postives = 76/128 (59.38%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKV---------GDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            L N+MDAQY+GE+ IGTP Q FTV+FDTGS+NLWVPS  C    +                 +NG +  I YG+G++SG+ SQD V V         G + V+ Q F EA K+  + F+AAKFDGILG
Sbjct:   51 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSANLWVPSIHCKLLDIACWTHRKYNSDKSSTYVKNGTTFDIHYGSGSLSGYLSQDTVSVPCNPSSSSPGGVTVQRQTFGEAIKQPGVVFIAAKFDGILG 178          
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: CATEA_XENLA (Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.148e-25
Identity = 69/182 (37.91%), Postives = 95/182 (52.20%), Query Frame = 2
Query:  122 ILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            IL    FA    GL+R+ L+++K   I + + +         +  +       S  +       L N+MD +YFGE+S+GTP Q FTVIFDTGSSNLWVPS  C  S                   NG + ++QYGTG++SG    D V V  ++V+NQ F E+  E   TF+ A+FDGILG
Sbjct:    4 ILVLLLFATLVYGLIRVPLKRQK--SIRKTLKEKGKLSHIWTQQGIDMVQYTDSCSNDQAPSEPLINYMDVEYFGEISVGTPPQNFTVIFDTGSSNLWVPSVYC-ISQACAQHDRFQPQLSSTYESNGNNFSLQYGTGSLSGVIGIDAVTVEGILVQNQQFGESVSEPGSTFVDAEFDGILG 182          
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: RENI1_MOUSE (Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.219e-24
Identity = 70/189 (37.04%), Postives = 97/189 (51.32%), Query Frame = 2
Query:  113 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLV---GQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            L L+ SP  F+LP        +  KK+  +  ++   G  +++         +R +L        T  V L N+++ QY+GE+ IGTP QTF VIFDTGS+NLWVPS KC    +                  NG+   I YG+G + GF SQD+V VG + V  Q F E T+   I F+ AKFDG+LG
Sbjct:   11 LLLLWSPCTFSLPTRTATFERIPLKKMPSVREILEERGVDMTRLSAEWGVFTKRPSLTNL-----TSPVVLTNYLNTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGSDFTIHYGSGRVKGFLSQDSVTVGGITV-TQTFGEVTELPLIPFMLAKFDGVLG 193          
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: RENI_PANTR (Renin OS=Pan troglodytes GN=REN PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.592e-24
Identity = 67/189 (35.45%), Postives = 96/189 (50.79%), Query Frame = 2
Query:  113 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLV---GQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            L L+     F LP D      +  K++  I   +   G  +++       P++R  L  +     T  V L N+MD QY+GE+ IGTP QTF V+FDTGSSN+WVPS+KC                       NG    ++Y TG +SGF SQD + VG + V  Q F E T+  ++ F+ A+FDG++G
Sbjct:   13 LLLLWGSCTFGLPTDTTTFKRIFLKRMPSIRESLKERGVDMARLGPEWSQPMKRLTLGNT-----TSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVG 195          
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: RENI_HUMAN (Renin OS=Homo sapiens GN=REN PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.592e-24
Identity = 67/189 (35.45%), Postives = 96/189 (50.79%), Query Frame = 2
Query:  113 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLV---GQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            L L+     F LP D      +  K++  I   +   G  +++       P++R  L  +     T  V L N+MD QY+GE+ IGTP QTF V+FDTGSSN+WVPS+KC                       NG    ++Y TG +SGF SQD + VG + V  Q F E T+  ++ F+ A+FDG++G
Sbjct:   13 LLLLWGSCTFGLPTDTTTFKRIFLKRMPSIRESLKERGVDMARLGPEWSQPMKRLTLGNT-----TSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVG 195          
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: RENI_RAT (Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.080e-24
Identity = 69/189 (36.51%), Postives = 98/189 (51.85%), Query Frame = 2
Query:  113 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLV---GQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            L L+ +  +F+LP D      +  KK+  +  ++   G  +++        +++ +       + T  V L N++D QY+GE+ IGTPSQTF VIFDTGS+NLWVPS KC                       NG    I YG+G + GF SQD V VG ++V  Q F E T+   I F+ AKFDG+LG
Sbjct:   11 LLLLWTSCSFSLPTDTASFGRILLKKMPSVREILEERGVDMTRISAEWGEFIKKSSF-----TNVTSPVVLTNYLDTQYYGEIGIGTPSQTFKVIFDTGSANLWVPSTKCGPLYTACEIHNLYDSSESSSYMENGTEFTIHYGSGKVKGFLSQDVVTVGGIIV-TQTFGEVTELPLIPFMLAKFDGVLG 193          
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: RENI_MACMU (Renin OS=Macaca mulatta GN=REN PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.080e-24
Identity = 66/189 (34.92%), Postives = 100/189 (52.91%), Query Frame = 2
Query:  113 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLV---GQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            L L+     F LP D      +  K++  I   +   G  +++       P++R     +LG++ + ++ L N+MD QY+GE+ IGTP QTF V+FDTGSSN+WVPS+KC                       NG    ++Y TG +SGF SQD + VG + V  Q F E T+  ++ F+ A+FDG++G
Sbjct:   13 LLLLWGSCTFGLPTDTTTFKRIFLKRMPSIRESLKERGVDMARLGPEWSQPMKRL----ALGNTTSSVI-LTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVG 195          
The following BLAST results are available for this feature:
BLAST of DR404960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
CATEB_XENLA3.208e-2539.41Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=... [more]
CARPV_CANAL3.208e-2549.15Vacuolar aspartic protease OS=Candida albicans GN=... [more]
CATD_SHEEP5.473e-2546.09Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 ... [more]
CATD_BOVIN5.473e-2546.09Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2[more]
CATEA_XENLA7.148e-2537.91Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=... [more]
RENI1_MOUSE1.219e-2437.04Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1[more]
RENI_PANTR1.592e-2435.45Renin OS=Pan troglodytes GN=REN PE=3 SV=1[more]
RENI_HUMAN1.592e-2435.45Renin OS=Homo sapiens GN=REN PE=1 SV=1[more]
RENI_RAT2.080e-2436.51Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2[more]
RENI_MACMU2.080e-2434.92Renin OS=Macaca mulatta GN=REN PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCSAA-PNP1239P04 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone CSAA-PNP1239P04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404960 ID=DR404960; Name=DR404960; organism=Citrus sinensis; type=EST; length=667bp
GGGGGATTTCTCGGNNNNNNCAGTCCACTTCTTTACTCTGTCTGTGCTCT
TTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATTCGG
GTTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTTGCC
AAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGATCAGA
TCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGATGAGA
ACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGATAC
TGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGGAGG
TTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACAGGA
AGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTCTTG
CTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAAGGA
ATGGGGCATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGTTTC
TTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCAGGA
TTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCAAGT
TTGATGGTATACTTGGG
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