DR404960

Overview
NameDR404960
Unique NameDR404960
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6928 contig Csv1_Contig6928:14..680. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: RENI_MACFA (Renin OS=Macaca fascicularis GN=REN PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.080e-24
Identity = 66/189 (34.92%), Postives = 100/189 (52.91%), Query Frame = 2
Query:  113 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLV---GQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            L L+     F LP D      +  K++  I   +   G  +++       P++R     +LG++ + ++ L N+MD QY+GE+ IGTP QTF V+FDTGSSN+WVPS+KC                       NG    ++Y TG +SGF SQD + VG + V  Q F E T+  ++ F+ A+FDG++G
Sbjct:   13 LLLLWGSCTFGLPTDTTTFKRIFLKRMPSIRESLKERGVDMARLGPEWSQPMKRL----ALGNTTSSVI-LTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVG 195          
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: NAPSA_HUMAN (Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.547e-24
Identity = 58/121 (47.93%), Postives = 71/121 (58.68%), Query Frame = 2
Query:  308 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            V L+N+ D QYFGE+ +GTP Q FTV FDTGSSNLWVPS +C +FSV                  NG   AIQYGTG + G  S+D + +G +   +  F EA  E S+ F  A FDGILG
Sbjct:   68 VPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRFDPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAFAHFDGILG 188          
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: RENI2_MOUSE (Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.051e-24
Identity = 69/186 (37.10%), Postives = 98/186 (52.69%), Query Frame = 2
Query:  113 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            L L+ SP  F+LP  G     +  KK+  +  ++ +    +   +      +    SL D  + +V L N++++QY+GE+ IGTP QTF VIFDTGS+NLWVPS KC    +                  NG    I YG+G + GF SQD+V VG + V  Q F E T+   I F+ A+FDG+LG
Sbjct:   11 LLLLWSPCTFSLPT-GTTFERIPLKKMPSVREILEER-GVDMTRLSAEWDVFTKRSSLTDLISPVV-LTNYLNSQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGDDFTIHYGSGRVKGFLSQDSVTVGGITV-TQTFGEVTELPLIPFMLAQFDGVLG 192          
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: RENI_CANFA (Renin OS=Canis familiaris GN=REN PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.761e-23
Identity = 57/126 (45.24%), Postives = 73/126 (57.94%), Query Frame = 2
Query:  293 SDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCY-FSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            + T  V L N++D QY+GE+ IGTP QTF V+FDTGS+NLWVPS +C                       NG +  I+YG+G + GF SQD V VG + V  Q F E T+   I F+ AKFDG+LG
Sbjct:   70 NSTSPVVLTNYLDTQYYGEIGIGTPPQTFKVVFDTGSANLWVPSTRCSPLYTACEIHCLYDSSESSSYMENGTTFTIRYGSGKVKGFLSQDMVTVGGITV-TQTFGEVTELPLIPFMLAKFDGVLG 194          
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: RENI_CALJA (Renin OS=Callithrix jacchus GN=REN PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.761e-23
Identity = 55/124 (44.35%), Postives = 73/124 (58.87%), Query Frame = 2
Query:  299 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            T  V L N+MD QY+GE+ IGTP QTF V+FDTGSSN+WVPS+KC                       NG    ++Y TG +SGF SQD + VG + V  Q F E T+  ++ F+ A+FDG++G
Sbjct:   67 TSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDVITVGGITV-TQTFGEVTEMPALPFMLAEFDGVVG 189          
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: PEPA1_RABIT (Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.141e-22
Identity = 57/119 (47.90%), Postives = 71/119 (59.66%), Query Frame = 2
Query:  311 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            +L N++DA+YFG +SIGTP Q FTVIFDTGSSNLWVPS  C  S+                     + +I YGTG+++G    D VKVG++   NQ F  +  E  ITFL A FDGILG
Sbjct:   66 SLENYLDAEYFGTISIGTPPQEFTVIFDTGSSNLWVPSTYC-SSLACFLHKRFNPDDSSTFQATSETLSITYGTGSMTGILGYDTVKVGNIEDTNQIFGLSKTEPGITFLVAPFDGILG 183          
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: RENI_SHEEP (Renin OS=Ovis aries GN=REN PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.490e-22
Identity = 58/124 (46.77%), Postives = 69/124 (55.65%), Query Frame = 2
Query:  299 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCY-FSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            T  V L N++D QY+GE+ IGTP QTF VIFDTGS+NLWVPS KC                       NG    I YG+G + GF SQD V VG + V  Q F E T+     F+ AKFDG+LG
Sbjct:   67 TSPVVLTNYLDTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSPLYTACEIHSLYDSLESSSYVENGTEFTIYYGSGKVKGFLSQDLVTVGGITV-TQTFGEVTELPLRPFMLAKFDGVLG 189          
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: CATE_RANCA (Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.490e-22
Identity = 62/170 (36.47%), Postives = 88/170 (51.76%), Query Frame = 2
Query:  158 GLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            G++R+ L+++K   + +++ +         +       L  S    +T    L N++D +YFG++SIGTP Q FTVIFDTGSSNLWVPS  C  S                   NG +  IQYGTG ++G    D V V  + V++Q F E+  E   TF  + FDGILG
Sbjct:   16 GIIRVPLKRQK--SMRKILKEKGKLSHLWTKQGNEFLQLSDSCSSPETASEPLMNYLDVEYFGQISIGTPPQQFTVIFDTGSSNLWVPSIYC-TSQACTKHNRYRPSESTTYVSNGEAFFIQYGTGNLTGILGIDQVTVQGITVQSQTFAESVSEPGSTFQDSNFDGILG 182          
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: CATE_RAT (Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 1.947e-22
Identity = 58/118 (49.15%), Postives = 70/118 (59.32%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            L N++D +YFG VSIG+PSQ FTVIFDTGSSNLWVPS  C  S                    G   +IQYGTG+++G    D V V  L V+ Q F E+ KE   TF+ A+FDGILG
Sbjct:   72 LINYLDMEYFGTVSIGSPSQNFTVIFDTGSSNLWVPSVYC-TSPACKAHPVFHPSQSSTYMEVGNHFSIQYGTGSLTGIIGADQVSVEGLTVEGQQFGESVKEPGQTFVNAEFDGILG 188          
BLAST of DR404960 vs. ExPASy Swiss-Prot
Match: PEPA2_RABIT (Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.320e-22
Identity = 56/119 (47.06%), Postives = 71/119 (59.66%), Query Frame = 2
Query:  311 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 667
            ++ N++DA+YFG +SIGTP Q FTVIFDTGSSNLWVPS  C  S+                     + +I YGTG+++G    D VKVG +   NQ F  +  E S+TFL A FDGILG
Sbjct:   66 SMENYLDAEYFGTISIGTPPQDFTVIFDTGSSNLWVPSTYC-SSLACALHKRFNPEDSSTYQGTSETLSITYGTGSMTGILGYDTVKVGSIEDTNQIFGLSKTEPSLTFLFAPFDGILG 183          
The following BLAST results are available for this feature:
BLAST of DR404960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
RENI_MACFA2.080e-2434.92Renin OS=Macaca fascicularis GN=REN PE=2 SV=1[more]
NAPSA_HUMAN3.547e-2447.93Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1[more]
RENI2_MOUSE6.051e-2437.10Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1[more]
RENI_CANFA1.761e-2345.24Renin OS=Canis familiaris GN=REN PE=2 SV=1[more]
RENI_CALJA1.761e-2344.35Renin OS=Callithrix jacchus GN=REN PE=2 SV=1[more]
PEPA1_RABIT1.141e-2247.90Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1[more]
RENI_SHEEP1.490e-2246.77Renin OS=Ovis aries GN=REN PE=2 SV=1[more]
CATE_RANCA1.490e-2236.47Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1[more]
CATE_RAT1.947e-2249.15Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3[more]
PEPA2_RABIT3.320e-2247.06Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCSAA-PNP1239P04 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone CSAA-PNP1239P04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404960 ID=DR404960; Name=DR404960; organism=Citrus sinensis; type=EST; length=667bp
GGGGGATTTCTCGGNNNNNNCAGTCCACTTCTTTACTCTGTCTGTGCTCT
TTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATTCGG
GTTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTTGCC
AAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGATCAGA
TCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGATGAGA
ACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGATAC
TGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGGAGG
TTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACAGGA
AGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTCTTG
CTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAAGGA
ATGGGGCATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGTTTC
TTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCAGGA
TTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCAAGT
TTGATGGTATACTTGGG
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