DR404728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404728 vs. ExPASy Swiss-Prot
Match: DAPF_CYAP4 (Diaminopimelate epimerase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dapF PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.438e-43 Identity = 79/124 (63.71%), Postives = 94/124 (75.81%), Query Frame = 2 Query: 335 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELEN--LNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEP 700 L F KY GLGNDFIL+DNRN P +TPEQA +CDR+FG+GADGVIF +P TDYTMRIFNSDGSEPEMCGNG+RC ARF A+LE L + +HT AG I P+++ DG+V VDMG+P Sbjct: 3 LQFTKYQGLGNDFILIDNRNEATPLLTPEQAVDICDRHFGVGADGVIFLLPATGETDYTMRIFNSDGSEPEMCGNGIRCLARFAADLEGHALTATPRYRIHTLAGTITPQVRSDGQVTVDMGQP 126
BLAST of DR404728 vs. ExPASy Swiss-Prot
Match: DAPF_ACAM1 (Diaminopimelate epimerase OS=Acaryochloris marina (strain MBIC 11017) GN=dapF PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.143e-42 Identity = 79/124 (63.71%), Postives = 95/124 (76.61%), Query Frame = 2 Query: 335 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELEN--LNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEP 700 + F KY GLGNDFIL+DNR+ +P +TP+QA ++CDRNFGIG DGVIFA+P TDYTMRI+NSDGSEPEMCGNG+RC ARF+A LE L ++ +HT AG I P +Q DG VKVDMG P Sbjct: 3 VEFTKYQGLGNDFILIDNRHQAQPCLTPDQAVQMCDRNFGIGGDGVIFALPPEGDTDYTMRIYNSDGSEPEMCGNGIRCLARFLAHLEGKPLQTDITYRIHTLAGTITPSLQADGLVKVDMGPP 126
BLAST of DR404728 vs. ExPASy Swiss-Prot
Match: DAPF_CYAP8 (Diaminopimelate epimerase OS=Cyanothece sp. (strain PCC 8801) GN=dapF PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.031e-40 Identity = 80/124 (64.52%), Postives = 97/124 (78.23%), Query Frame = 2 Query: 335 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELE--NLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEP 700 + F KY GLGNDFIL+DNR+S P ++PEQA K+CDR+FGIGADGVIF +PG TDYTMRIFNSDGSEP+MCGNG+RC ARFIA LE GK ++ + T AG+I P ++ G+VKVDMG P Sbjct: 3 IEFSKYQGLGNDFILIDNRSSHTPLVSPEQAIKMCDRHFGIGADGVIFVLPGTANTDYTMRIFNSDGSEPQMCGNGIRCLARFIAHLEGGETLGK-TYQIDTLAGVISPRLEAQGQVKVDMGTP 125
BLAST of DR404728 vs. ExPASy Swiss-Prot
Match: DAPF_MICAN (Diaminopimelate epimerase OS=Microcystis aeruginosa (strain NIES-843) GN=dapF PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.759e-40 Identity = 79/121 (65.29%), Postives = 95/121 (78.51%), Query Frame = 2 Query: 341 FVKYHGLGNDFILVDNRNSTEPRITPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNG-KQSFTVHTGAGLIVPEIQDDGKVKVDMGEP 700 F KY GLGNDFIL+DNR+S EP IT E A +CDR+FGIGADGVIFA+PG TDYTMRIFNSDGSEPEMCGNG+RC A+FIA LE N +++ +HT AG I+P ++ + +V VDMG P Sbjct: 5 FTKYQGLGNDFILIDNRHSPEPLITAEMAVAMCDRHFGIGADGVIFALPGQAETDYTMRIFNSDGSEPEMCGNGIRCLAQFIARLEANNAIGRTYRIHTLAGTIIPRLEANEQVTVDMGPP 125
BLAST of DR404728 vs. ExPASy Swiss-Prot
Match: DAPF_CYAP7 (Diaminopimelate epimerase OS=Cyanothece sp. (strain PCC 7424) GN=dapF PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.920e-40 Identity = 77/124 (62.10%), Postives = 96/124 (77.42%), Query Frame = 2 Query: 335 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLN--GKQSFTVHTGAGLIVPEIQDDGKVKVDMGEP 700 + F KYHGLGNDFIL+DNR+ +EP ++PE A ++CDR+FGIGADGVIF +PG + TDY MRIFNSDGSEPEMCGNG+RC A+FIAELE GK S+ + T GL+ P ++ +V VDMG P Sbjct: 3 IEFTKYHGLGNDFILIDNRHGSEPMVSPEMAVEMCDRHFGIGADGVIFVLPGTSQTDYQMRIFNSDGSEPEMCGNGIRCLAQFIAELEKTTEVGK-SYRIDTLGGLMTPRLEAQEQVTVDMGLP 125
BLAST of DR404728 vs. ExPASy Swiss-Prot
Match: DAPF_SYNJA (Diaminopimelate epimerase OS=Synechococcus sp. (strain JA-3-3Ab) GN=dapF PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.151e-38 Identity = 73/122 (59.84%), Postives = 92/122 (75.41%), Query Frame = 2 Query: 335 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEP 700 L F KY GLGNDFILVDNR+ +P +TPE+A LC+R FG+GADGVIF +PG G D++MR+FNSDGSE EMCGNG+RC ARF+ +L ++ +HT AG IVP+++ DG V VDMG P Sbjct: 5 LSFHKYQGLGNDFILVDNRHQPQPCLTPEEAVALCNRRFGVGADGVIFLLPGQEGADFSMRLFNSDGSEAEMCGNGIRCLARFLQDLGIPGQDGAYQIHTLAGRIVPQVRPDGLVTVDMGIP 126
BLAST of DR404728 vs. ExPASy Swiss-Prot
Match: DAPF_SYNJB (Diaminopimelate epimerase OS=Synechococcus sp. GN=dapF PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.821e-37 Identity = 72/122 (59.02%), Postives = 92/122 (75.41%), Query Frame = 2 Query: 335 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEP 700 L F KY GLGNDFILVDNR ++P ++PE+A LC+R FG+GADGVIF +PG G D++MR+FNSDGSE EMCGNG+RC ARF+ +L ++ +HT AG IVP+++ DG V VDMG P Sbjct: 5 LSFHKYQGLGNDFILVDNRWQSQPCLSPEEAVALCNRRFGVGADGVIFLLPGQEGADFSMRLFNSDGSEAEMCGNGIRCLARFLQDLGIPGRDGAYQIHTLAGRIVPQVRADGLVTVDMGIP 126
BLAST of DR404728 vs. ExPASy Swiss-Prot
Match: DAPF_THEEB (Diaminopimelate epimerase OS=Thermosynechococcus elongatus (strain BP-1) GN=dapF PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.476e-35 Identity = 70/124 (56.45%), Postives = 91/124 (73.39%), Query Frame = 2 Query: 335 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQ--SFTVHTGAGLIVPEIQDDGKVKVDMGEP 700 L F KY GLGNDF+L+DNR+ E +TPEQA CDR+FG+GADGVIF + G +DY MR++N+DGS +MCGNG+RC A+FI LE + + + + T AGLIVPE+Q DG+V VDMG+P Sbjct: 3 LSFQKYQGLGNDFLLIDNRHQEELLLTPEQAQFWCDRHFGVGADGVIFLLRGTGESDYRMRMYNADGSVAQMCGNGIRCLAKFIFALEGRSAGEIVRYRIDTLAGLIVPEVQADGQVTVDMGKP 126
BLAST of DR404728 vs. ExPASy Swiss-Prot
Match: DAPF_PROMM (Diaminopimelate epimerase OS=Prochlorococcus marinus (strain MIT 9313) GN=dapF PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.397e-29 Identity = 65/126 (51.59%), Postives = 86/126 (68.25%), Query Frame = 2 Query: 335 LHFVKYHGLGNDFILVDNRNS--TEPRITPEQA--AKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEP 700 L F KY GLGNDF+L+D R T+ I P+ A K+CDR+FGIGADG+I A+P D M+IFN+DGS EMCGNG+RC RF+A++E Q + + T AG+I P +Q+DG++ VDMG P Sbjct: 5 LQFSKYQGLGNDFLLIDGREDQLTQQVINPDPAWVRKICDRHFGIGADGLILALPPRADGDLRMQIFNADGSLAEMCGNGIRCLTRFLADIEGDLCVQRWNIETLAGIICPVLQEDGQICVDMGTP 130
BLAST of DR404728 vs. ExPASy Swiss-Prot
Match: DAPF_CARHZ (Diaminopimelate epimerase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dapF PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.491e-27 Identity = 62/126 (49.21%), Postives = 83/126 (65.87%), Query Frame = 2 Query: 335 LHFVKYHGLGNDFILVD---NRNSTEPRITPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPI 703 + F+K HGLGNDF++VD N+N ++ + A K+CDR FGIGADG++ +P D+ MRI NSDGSE EMCGN +RC AR+ E N K+ V T AG+I PE+ ++ V+VDMG PI Sbjct: 1 MEFLKMHGLGNDFVVVDEIKNQNLVNKNLS-DLAKKICDRRFGIGADGLVLLLPSEKA-DFKMRIINSDGSEAEMCGNAIRCVARYYVEKYN-PAKKQLEVETLAGIIKPEVLENNMVRVDMGRPI 123 The following BLAST results are available for this feature:
BLAST of DR404728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 374
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404728 ID=DR404728; Name=DR404728; organism=Citrus sinensis; type=EST; length=703bpback to top |