DR404633
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_PHEZH (30S ribosomal protein S11 OS=Phenylobacterium zucineum (strain HLK1) GN=rpsK PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 43/108 (39.81%), Postives = 56/108 (51.85%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 GVAH+ ASFN+T + +TD G G M K R +S+PYAA +AA+D + E G+ L + + +SALRAL GM I I DVTPIP Sbjct: 19 GVAHVNASFNNTMVTITDAQGNTISWSSAGLMGFKGSR-KSTPYAAQMAAEDAGRKAAEHGVRTLEVNVSG--------PGSGRESALRALQAVGMTITTIRDVTPIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_LEPCP (30S ribosomal protein S11 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=rpsK PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 GVAH+ ASFN+T I +TD G +GG K R +S+P+AA +AA+ +E GI L +K++ +S++RALA G++I I DVTP+P Sbjct: 24 GVAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSR-KSTPFAAQVAAEVAGRAAQEQGIKNLDVKIKG--------PGPGRESSVRALASLGIRIASISDVTPVP 122
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_CUPTR (30S ribosomal protein S11 OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=rpsK PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AH+ ASFN+T I +TD G GG K R +S+P+AA +AA++ ++ GI L ++++ +SA+RAL G+KI IEDVTPIP Sbjct: 22 GIAHVHASFNNTIITITDRQGNALSWATAGGQGFKGSR-KSTPFAAQVAAENAGRVAQDQGIKNLEVRIKG--------PGPGRESAVRALNALGIKIAIIEDVTPIP 120
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_WIGBR (30S ribosomal protein S11 OS=Wigglesworthia glossinidia brevipalpis GN=rpsK PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11 Identity = 45/126 (35.71%), Postives = 66/126 (52.38%), Query Frame = 1 Query: 136 KEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 K++N ++ + + G+AHI ASFN+T + +TD G +GG + R +S+P+AA +AA+ S KE GI L I ++ +S +RAL SG KI I DVTPIP Sbjct: 3 KKQNSSISRKKIKRQILEGIAHIHASFNNTIVTITDRQGNTLGWATSGGSGFRGSR-KSTPFAAQVAAEKCSEIAKEYGIKNLEIMVKG--------PGPGRESTIRALNSSGFKITNITDVTPIP 119
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_THISH (30S ribosomal protein S11 OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=rpsK PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11 Identity = 39/108 (36.11%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AHI+A+FN+T + +TD G +GG + R +S+P+AA +AA+ T +E G+ L + +R +SA+RAL +G KI I D+TPIP Sbjct: 19 GIAHIYATFNNTIVTITDRQGNTLSWATSGGSGFRGSR-KSTPFAAQVAAERAGTAAQEYGLKNLEVLVRG--------PGPGRESAVRALNNAGFKILNISDITPIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_RALPJ (30S ribosomal protein S11 OS=Ralstonia pickettii (strain 12J) GN=rpsK PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AH+ ASFN+T I +TD G +GG K R +S+P+AA +AA+ ++ GI L ++++ +SA+RAL G+KI IEDVTP+P Sbjct: 23 GIAHVHASFNNTIITITDRQGNALSWATSGGQGFKGSR-KSTPFAAQVAAESAGRVAQDQGIKNLEVRIKG--------PGPGRESAVRALNNLGIKIQLIEDVTPVP 121
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_RALME (30S ribosomal protein S11 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=rpsK PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AH+ ASFN+T I +TD G GG K R +S+P+AA +AA++ ++ GI L ++++ +SA+RAL G+KI IEDVTP+P Sbjct: 23 GIAHVHASFNNTIITITDRQGNALSWATAGGQGFKGSR-KSTPFAAQVAAENAGRVAQDQGIKNLEVRIKG--------PGPGRESAVRALNALGIKIAVIEDVTPVP 121
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_NITMU (30S ribosomal protein S11 OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=rpsK PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11 Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AH+ ASFN+T + +TD G +GG K R +S+P+AA +AA+ +E G+ L ++++ +SA+RAL +G KI I DVTP+P Sbjct: 19 GIAHVHASFNNTIVTITDRQGNALSWATSGGAGFKGSR-KSTPFAAQVAAEQAGRAAQEYGVKNLEVRIKG--------PGPGRESAVRALNAAGFKITSISDVTPVP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_AZOSB (30S ribosomal protein S11 OS=Azoarcus sp. (strain BH72) GN=rpsK PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AH+ ASFN+T I +TD G +GG K R +S+P+AA +AA+ +E G+ L ++++ +SA+RAL GMKI I D+TPIP Sbjct: 19 GIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSR-KSTPFAAQVAAEAAGKVAQECGVKNLEVRIKG--------PGPGRESAVRALNALGMKISSITDITPIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_ALCBS (30S ribosomal protein S11 OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=rpsK PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11 Identity = 39/108 (36.11%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AH+ ASFN+T I +TD G +GG + R +S+P+AA +AA++ K+ G+ L ++++ +S++RAL G KI IEDVTPIP Sbjct: 22 GIAHVHASFNNTIITITDRQGNALSWATSGGAGFRGSR-KSTPFAAQVAAENAGNAAKDYGLKNLEVRVKG--------PGPGRESSIRALNGCGYKITHIEDVTPIP 120 The following BLAST results are available for this feature:
BLAST of DR404633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404633 ID=DR404633; Name=DR404633; organism=Citrus sinensis; type=EST; length=731bpback to top |