DR404633
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_STRPZ (30S ribosomal protein S11 OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=rpsK PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.379e-11 Identity = 37/109 (33.94%), Postives = 62/109 (56.88%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 FGVAHI A+FN+T + +TD+ G G + K R +S+P+AA +AA+ + +E G+ + + ++ +SA+RALA +G+++ I DVTP+P Sbjct: 16 FGVAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSR-KSTPFAAQMAAEAAAKSAQEHGLKTVEVTVKG--------PGSGRESAIRALAAAGLEVTAIRDVTPVP 115
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_RHORT (30S ribosomal protein S11 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=rpsK PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.379e-11 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AH+ ASFN+T I +TD+ G G K R +S+PYAA +AA+D + +E G+ L + ++ +SALRAL G ++ I+DVTPIP Sbjct: 19 GIAHVSASFNNTKITITDVQGNAIAWSSAGAQGFKGSR-KSTPYAAQVAAEDAGRKAQEHGMKTLEVMVKG--------PGSGRESALRALQSVGFQVTSIKDVTPIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_RALSO (30S ribosomal protein S11 OS=Ralstonia solanacearum GN=rpsK PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.379e-11 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AH+ ASFN+T I +TD G +GG K R +S+P+AA +AA+ ++ GI L ++++ +SA+RAL G+KI IEDVTP+P Sbjct: 23 GIAHVHASFNNTIITITDRQGNALSWATSGGQGFKGSR-KSTPFAAQVAAESAGRVAQDQGIKNLEVRIKG--------PGPGRESAVRALNNLGIKIQVIEDVTPVP 121
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_ERYLH (30S ribosomal protein S11 OS=Erythrobacter litoralis (strain HTCC2594) GN=rpsK PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.379e-11 Identity = 43/108 (39.81%), Postives = 56/108 (51.85%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 GVAH+ ASFN+T I +TD G G M K R +S+PYAA +AA D + E G+ L ++++ +SALRAL G I I DVTPIP Sbjct: 19 GVAHVNASFNNTMITITDAQGNAISWSSAGMMGFKGSR-KSTPYAAQVAADDAGRKAAEHGVRTLEVEVKG--------PGSGRESALRALQAVGFTITSIRDVTPIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_BUCCC (30S ribosomal protein S11 OS=Buchnera aphidicola subsp. Cinara cedri GN=rpsK PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.379e-11 Identity = 46/135 (34.07%), Postives = 71/135 (52.59%), Query Frame = 1 Query: 109 MSRRKNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 MS++K +PK+ + + DG +AHI ASFN+T + +TD G +GG + R +S+P+AA +AA+ + R K+ GI L + ++ +S +RAL SG +I I DVTPIP Sbjct: 1 MSKKKLNQPKKR---IKRQILDG-----IAHIHASFNNTIVTITDRKGNTLGWATSGGSGFRGSR-KSTPFAAQVAAEKCADRVKDYGIKNLEVMIKG--------PGPGRESTIRALNSSGFRITNIIDVTPIP 118
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_METEP (30S ribosomal protein S11 OS=Methylobacterium extorquens (strain PA1) GN=rpsK PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.108e-11 Identity = 42/110 (38.18%), Postives = 58/110 (52.73%), Query Frame = 1 Query: 184 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 V GVAH+ ASFN+T I +TD G G M K R +S+PYAA +AA+D + + E G+ L +++ +SALRAL +G + I DVT IP Sbjct: 17 VSGVAHVAASFNNTMITITDAQGNTISWSSAGAMGFKGSR-KSTPYAAQVAAEDAARKASEHGMRTLEVEVSG--------PGSGRESALRALQAAGFTVTSIRDVTSIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_METC4 (30S ribosomal protein S11 OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=rpsK PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.108e-11 Identity = 42/110 (38.18%), Postives = 58/110 (52.73%), Query Frame = 1 Query: 184 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 V GVAH+ ASFN+T I +TD G G M K R +S+PYAA +AA+D + + E G+ L +++ +SALRAL +G + I DVT IP Sbjct: 17 VSGVAHVAASFNNTMITITDAQGNTISWSSAGAMGFKGSR-KSTPYAAQVAAEDAARKASEHGMRTLEVEVSG--------PGSGRESALRALQAAGFTVTSIRDVTSIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_POLSQ (30S ribosomal protein S11 OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=rpsK PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AH+ ASFN+T I +TD G +GG K R +S+P+AA +AA+ E GI L ++++ +SA+RAL G+KI I+DVTP+P Sbjct: 25 GIAHVHASFNNTIITITDRQGNALSWATSGGQGFKGSR-KSTPFAAQVAAEVAGKAAVECGIKNLEVQIKG--------PGPGRESAVRALNSLGIKITEIQDVTPVP 123
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_NOVAD (30S ribosomal protein S11 OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=rpsK PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11 Identity = 41/108 (37.96%), Postives = 56/108 (51.85%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AH+ ASFN+T + +TD G G M K R +S+PYAA +AA D + E G+ L ++++ +SALRAL G I I DVTPIP Sbjct: 19 GIAHVNASFNNTMVTITDAQGNAISWSSAGMMGFKGSR-KSTPYAAQVAADDAGKKAAEHGVRTLEVEVKG--------PGSGRESALRALQAVGFTITAIRDVTPIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_NITHX (30S ribosomal protein S11 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=rpsK PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11 Identity = 42/108 (38.89%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 GVAH+ +SFN+T I +TD G G M K R +S+PYAA +AA+DVS + +E G+ L +++ +SALRAL +G + I DVT IP Sbjct: 20 GVAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSR-KSTPYAAQVAAEDVSKKAQEHGMRTLEVEVAG--------PGSGRESALRALQAAGFTVTSIRDVTAIP 118 The following BLAST results are available for this feature:
BLAST of DR404633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404633 ID=DR404633; Name=DR404633; organism=Citrus sinensis; type=EST; length=731bpback to top |