DR404633
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_JANMA (30S ribosomal protein S11 OS=Janthinobacterium sp. (strain Marseille) GN=rpsK PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AH+ ASFN+T I +TD G +GG K R +S+P+AA +AA+ E GI L ++++ +SA+RAL G+KI +I+DVTP+P Sbjct: 24 GIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSR-KSTPFAAQVAAEAAGKVAIECGIKNLEVRIKG--------PGPGRESAVRALNNLGIKITQIQDVTPVP 122
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_BRASO (30S ribosomal protein S11 OS=Bradyrhizobium sp. (strain ORS278) GN=rpsK PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11 Identity = 42/108 (38.89%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 GVAH+ +SFN+T I +TD G G M K R +S+PYAA +AA+DVS + +E G+ L +++ +SALRAL +G + I DVT IP Sbjct: 19 GVAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSR-KSTPYAAQVAAEDVSKKAQEHGMRTLEVEVAG--------PGSGRESALRALQAAGFTVTSIRDVTTIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_BRASB (30S ribosomal protein S11 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rpsK PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11 Identity = 42/108 (38.89%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 GVAH+ +SFN+T I +TD G G M K R +S+PYAA +AA+DVS + +E G+ L +++ +SALRAL +G + I DVT IP Sbjct: 19 GVAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSR-KSTPYAAQVAAEDVSKKAQEHGMRTLEVEVAG--------PGSGRESALRALQAAGFTVTSIRDVTTIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_BRAJA (30S ribosomal protein S11 OS=Bradyrhizobium japonicum GN=rpsK PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11 Identity = 42/108 (38.89%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 GVAH+ +SFN+T I +TD G G M K R +S+PYAA +AA+DVS + +E G+ L +++ +SALRAL +G + I DVT IP Sbjct: 19 GVAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSR-KSTPYAAQVAAEDVSKKAQEHGMRTLEVEVAG--------PGSGRESALRALQAAGFTVTSIRDVTTIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_SILST (30S ribosomal protein S11 OS=Silicibacter sp. (strain TM1040) GN=rpsK PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 45/134 (33.58%), Postives = 68/134 (50.75%), Query Frame = 1 Query: 109 MSRRKNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPI 510 M+R K R ++E + GVAH+ +SFN+T I ++D+ G G M K R +S+PYAA +AA+D + ++ G+ L ++++ +SALRALA G I I DVTPI Sbjct: 1 MARDKTRTKRKERKNIAS---------GVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSR-KSTPYAAQMAAEDAGRKAQDHGVKTLEVEVQG--------PGSGRESALRALAAIGFNITNIRDVTPI 116
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_RHOS5 (30S ribosomal protein S11 OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=rpsK PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 1 Query: 109 MSRRKNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPI 510 M+R K R ++E + GVAH+ +SFN+T I ++D+ G G M K R +S+PYAA +AA+D + + +E G+ + ++++ +SALRALA +G+ I I DVTP+ Sbjct: 1 MARDKTRMKRKERKNIAA---------GVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSR-KSTPYAAQMAAEDAAKKAQEHGMKTIEVEVQG--------PGSGRESALRALAAAGLNITSIRDVTPM 116
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_RHOPB (30S ribosomal protein S11 OS=Rhodopseudomonas palustris (strain BisB18) GN=rpsK PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AH+ +SFN+T I +TD G G M K R +S+PYAA +AA+DVS + +E G+ L +++ +SALRAL +G + I DVT IP Sbjct: 19 GIAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSR-KSTPYAAQVAAEDVSKKAQEHGMRTLEVEVAG--------PGSGRESALRALQAAGFTVTSIRDVTTIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_RHOP5 (30S ribosomal protein S11 OS=Rhodopseudomonas palustris (strain BisA53) GN=rpsK PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AH+ +SFN+T I +TD G G M K R +S+PYAA +AA+DVS + +E G+ L +++ +SALRAL +G + I DVT IP Sbjct: 19 GIAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSR-KSTPYAAQVAAEDVSKKAQEHGMRTLEVEVAG--------PGSGRESALRALQAAGFTVTSIRDVTTIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_RHOP2 (30S ribosomal protein S11 OS=Rhodopseudomonas palustris (strain HaA2) GN=rpsK PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AH+ +SFN+T I +TD G G M K R +S+PYAA +AA+DV+ + +E G+ L +++ +SALRAL SG + I DVT IP Sbjct: 19 GIAHVNSSFNNTTITITDAQGNAIAWSSAGTMGFKGSR-KSTPYAAQVAAEDVAKKAQEHGMRTLEVEVAG--------PGSGRESALRALQASGFTVTSIRDVTTIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_PARDP (30S ribosomal protein S11 OS=Paracoccus denitrificans (strain Pd 1222) GN=rpsK PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 46/134 (34.33%), Postives = 68/134 (50.75%), Query Frame = 1 Query: 109 MSRRKNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPI 510 M+R K R ++E + GVAH+ +SFN+T I ++D+ G G M K R +S+PYAA +AA+D + +E G+ L ++++ +SALRALA G I I DVTPI Sbjct: 1 MARDKTRIKRKERKNIAT---------GVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSR-KSTPYAAQMAAEDAGKKAQEHGVRTLEVEVQG--------PGSGRESALRALAAVGFNITAIRDVTPI 116 The following BLAST results are available for this feature:
BLAST of DR404633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404633 ID=DR404633; Name=DR404633; organism=Citrus sinensis; type=EST; length=731bpback to top |