DR404633
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_BURCA (30S ribosomal protein S11 OS=Burkholderia cenocepacia (strain AU 1054) GN=rpsK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 40/108 (37.04%), Postives = 57/108 (52.78%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 GV H+ ASFN+T I +TD G +GG K R +S+P+AA +AA+ E G+ L ++++ +SA+RAL G+KI I DVTPIP Sbjct: 23 GVVHVHASFNNTIITITDRQGNALAWATSGGQGFKGSR-KSTPFAAQVAAESAGRVAMEYGVKNLEVRIKG--------PGPGRESAVRALHGLGIKITAISDVTPIP 121
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_BURA4 (30S ribosomal protein S11 OS=Burkholderia ambifaria (strain MC40-6) GN=rpsK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 40/108 (37.04%), Postives = 57/108 (52.78%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 GV H+ ASFN+T I +TD G +GG K R +S+P+AA +AA+ E G+ L ++++ +SA+RAL G+KI I DVTPIP Sbjct: 23 GVVHVHASFNNTIITITDRQGNALAWATSGGQGFKGSR-KSTPFAAQVAAESAGRVAMEYGVKNLEVRIKG--------PGPGRESAVRALHGLGIKITAISDVTPIP 121
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_BORPE (30S ribosomal protein S11 OS=Bordetella pertussis GN=rpsK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 38/108 (35.19%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AH+ ASFN+T I +TD G +GG K R +S+P+AA +AA+ E GI L ++++ +S++RAL G+KI I D+TP+P Sbjct: 23 GIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSR-KSTPFAAQVAAETAGRVAMEYGIKTLEVRIKG--------PGPGRESSVRALNALGIKISSIADITPVP 121
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_BORPA (30S ribosomal protein S11 OS=Bordetella parapertussis GN=rpsK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 38/108 (35.19%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AH+ ASFN+T I +TD G +GG K R +S+P+AA +AA+ E GI L ++++ +S++RAL G+KI I D+TP+P Sbjct: 23 GIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSR-KSTPFAAQVAAETAGRVAMEYGIKTLEVRIKG--------PGPGRESSVRALNALGIKISSIADITPVP 121
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_BORBR (30S ribosomal protein S11 OS=Bordetella bronchiseptica GN=rpsK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 38/108 (35.19%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AH+ ASFN+T I +TD G +GG K R +S+P+AA +AA+ E GI L ++++ +S++RAL G+KI I D+TP+P Sbjct: 23 GIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSR-KSTPFAAQVAAETAGRVAMEYGIKTLEVRIKG--------PGPGRESSVRALNALGIKISSIADITPVP 121
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_BORA1 (30S ribosomal protein S11 OS=Bordetella avium (strain 197N) GN=rpsK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 38/108 (35.19%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AH+ ASFN+T I +TD G +GG K R +S+P+AA +AA+ E GI L ++++ +S++RAL G+KI I D+TP+P Sbjct: 23 GIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSR-KSTPFAAQVAAETAGRVAMEYGIKTLEVRIKG--------PGPGRESSVRALNALGIKISSIADITPVP 121
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_BEII9 (30S ribosomal protein S11 OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rpsK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 41/110 (37.27%), Postives = 59/110 (53.64%), Query Frame = 1 Query: 184 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 V GVAH+ ++FN+T I +TD G G M K R +S+PYAA +AA+D + + E G+ L +++ +SALRAL +G + I DVTPIP Sbjct: 17 VSGVAHVNSTFNNTMITITDAQGNTISWSSAGMMGFKGSR-KSTPYAAQMAAEDCARKAVEHGMRTLEVEVSG--------PGSGRESALRALQAAGFTVTSIRDVTPIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_ALTMD (30S ribosomal protein S11 OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=rpsK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AHI ASFN+T + +TD SG +GG + R +S+P+AA +AA+ +E G+ L + ++ +SA+RAL +G KI I DVTPIP Sbjct: 20 GMAHIHASFNNTIVTITDRSGNALAWATSGGSGFRGSR-KSTPFAAQVAAERAGVAAQEYGLKNLEVFVKG--------PGPGRESAIRALNATGYKITNITDVTPIP 118
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_ACICJ (30S ribosomal protein S11 OS=Acidiphilium cryptum (strain JF-5) GN=rpsK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 40/108 (37.04%), Postives = 56/108 (51.85%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 GVAH+ ASFN+T + ++D G G K R +S+PYAA +AA+D + +E G+ L I++ +SALRAL G I I D+TPIP Sbjct: 20 GVAHVLASFNNTMVTISDAQGNAISWSSAGSQGFKGSR-KSTPYAAQVAAEDAGRKAREHGMETLEIEVSG--------PGAGRESALRALQTIGFSITAIRDLTPIP 118 The following BLAST results are available for this feature:
BLAST of DR404633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404633 ID=DR404633; Name=DR404633; organism=Citrus sinensis; type=EST; length=731bpback to top |