DR404633
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_AERPE (30S ribosomal protein S11P OS=Aeropyrum pernix GN=rps11p PE=3 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 1.027e-30 Identity = 65/113 (57.52%), Postives = 85/113 (75.22%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 525 +GVAHI++SFN+T +H+TDL+G ET+ R+TGGM VKADR++ SPYAAM+AA + + E GI A+HIK+RA AQ+A+RALAR+G IGRIEDVTPIP D+T Sbjct: 10 WGVAHIYSSFNNTHVHITDLTGAETVARVTGGMVVKADREKPSPYAAMIAASRAAQKAMERGIAAIHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPIPHDTT 122
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_PYRKO (30S ribosomal protein S11P OS=Pyrococcus kodakaraensis GN=rps11p PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.289e-30 Identity = 64/113 (56.64%), Postives = 85/113 (75.22%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 525 +GVAHI++S+N+T IH+TDL+G ET+ R +GGM VKADRDE SPYAAM+AA+ + E GIT +HIK+RA AQ+A+RAL+R+G++IGR+EDVTPIP D T Sbjct: 17 WGVAHIYSSYNNTIIHITDLTGAETISRWSGGMVVKADRDEPSPYAAMIAARRAAEEAMEKGITGVHIKVRAPGGSKSKSPGPGAQAAIRALSRAGLRIGRVEDVTPIPHDGT 129
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_PYRFU (30S ribosomal protein S11P OS=Pyrococcus furiosus GN=rps11p PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.989e-30 Identity = 64/113 (56.64%), Postives = 84/113 (74.34%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 525 +G+AHI++SFN+T IH+TD++G ET+ R +GGM VKADRDE SPYAAMLAA+ + E GI +HI++RA AQ+A+RALAR+G+KIGR+EDVTPIP D T Sbjct: 14 WGIAHIYSSFNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGT 126
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_PYRHO (30S ribosomal protein S11P OS=Pyrococcus horikoshii GN=rps11p PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.659e-30 Identity = 63/113 (55.75%), Postives = 84/113 (74.34%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 525 +G+AHI++S+N+T IH+TD++G ET+ R +GGM VKADRDE SPYAAMLAA+ + E GI +HI++RA AQ+A+RALAR+G+KIGR+EDVTPIP D T Sbjct: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGT 126
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_PYRAB (30S ribosomal protein S11P OS=Pyrococcus abyssi GN=rps11p PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.659e-30 Identity = 63/113 (55.75%), Postives = 84/113 (74.34%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 525 +G+AHI++S+N+T IH+TD++G ET+ R +GGM VKADRDE SPYAAMLAA+ + E GI +HI++RA AQ+A+RALAR+G+KIGR+EDVTPIP D T Sbjct: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGT 126
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_METMJ (30S ribosomal protein S11P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps11p PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.659e-30 Identity = 66/115 (57.39%), Postives = 84/115 (73.04%), Query Frame = 1 Query: 178 EHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 522 E +G+AHIFASFN+T I VTDLSG ET+ + +GGM VK DR+ESSPYAAM A V+ ++ GIT +H+K+RA AQ+A+RALAR+GM+IGRIEDVTP+P DS Sbjct: 3 EEKWGIAHIFASFNNTIITVTDLSGAETVTKSSGGMVVKQDRNESSPYAAMQMAIQVAQNARDKGITGVHVKVRAPGRGKQRSPGPGAQAAIRALARAGMRIGRIEDVTPVPHDS 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_METKA (30S ribosomal protein S11P OS=Methanopyrus kandleri GN=rps11p PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.659e-30 Identity = 66/113 (58.41%), Postives = 83/113 (73.45%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 525 +G+AHI+ASFN+T I +TDL+G ET R +GGM V ADR+ESSPYAAM AA+ + E GITA+H+K+RA AQ+A+RALAR+G+KIGRIEDVTPIP D T Sbjct: 14 WGIAHIYASFNNTIITITDLTGAETFARWSGGMVVDADREESSPYAAMKAARRAAEEAMEKGITAVHVKVRAPGGHGPKTPGPGAQAAIRALARAGLKIGRIEDVTPIPHDGT 126
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_THEON (30S ribosomal protein S11P OS=Thermococcus onnurineus (strain NA1) GN=rps11p PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.483e-29 Identity = 63/113 (55.75%), Postives = 83/113 (73.45%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 525 +GVAHI++S+N+T IH+TDL+G ET+ R +GGM VKADRDE SPYAAM+AA+ + E G +HIK+RA AQ+A+RALAR+G++IGR+EDVTPIP D T Sbjct: 16 WGVAHIYSSYNNTIIHITDLTGAETVSRWSGGMVVKADRDEPSPYAAMIAAKRAAEEAMEKGFVGVHIKVRAPGGSKSKTPGPGAQAAIRALARAGLRIGRVEDVTPIPHDGT 128
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_METB6 (30S ribosomal protein S11P OS=Methanoregula boonei (strain 6A8) GN=rps11p PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.937e-29 Identity = 65/112 (58.04%), Postives = 83/112 (74.11%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 522 +G+AHIFASFN+T I VTDLSG ET+ + +GGM VK DR+ESSPYAAM A +V+ +E GI +H+K+RA AQ+A+RALAR+GM+IGRIEDVTP+P DS Sbjct: 9 WGIAHIFASFNNTIITVTDLSGAETVTKSSGGMVVKQDRNESSPYAAMQMAANVAAIAREKGIVGVHVKVRAPGQGKQRSPGPGAQAAIRALARAGMRIGRIEDVTPVPHDS 120
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_THEGJ (30S ribosomal protein S11P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps11p PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.530e-29 Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 525 +GVAHI++S+N+T IH+TD++G ET+ R +GGM VKADRDE SPYAAM+AA+ + E G +HIK+RA AQ+A+RALAR+G++IGR+EDVTPIP D T Sbjct: 15 WGVAHIYSSYNNTIIHITDITGAETVSRWSGGMVVKADRDEPSPYAAMIAARRAAEEAMEKGFVGVHIKVRAPGGSKSKSPGPGAQAAIRALARAGLRIGRVEDVTPIPHDGT 127 The following BLAST results are available for this feature:
BLAST of DR404633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404633 ID=DR404633; Name=DR404633; organism=Citrus sinensis; type=EST; length=731bpback to top |