DR404633
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_METHJ (30S ribosomal protein S11P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps11p PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.530e-29 Identity = 65/117 (55.56%), Postives = 85/117 (72.65%), Query Frame = 1 Query: 172 DGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 522 +G+ +GVAHI+ASFN+T I VTDL+G ET+ + +GGM VK DR+ESSPYAAM A +V+ +E GI LH+K+RA AQ+A+RALAR+GM+IG IEDVTP+P DS Sbjct: 3 EGKEKWGVAHIYASFNNTIITVTDLTGAETITKSSGGMVVKQDRNESSPYAAMQMAGNVAQAAREKGIVGLHVKVRAPGRGKQRSPGPGAQAAIRALARAGMRIGLIEDVTPVPHDS 119
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_IGNH4 (30S ribosomal protein S11P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps11p PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.530e-29 Identity = 64/112 (57.14%), Postives = 83/112 (74.11%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 522 +GVAHIF+S N+TF+H+TD++G ET R+TGGM VKAD ++ SPYAAM+AA + + E GITA+HIK+RA AQ+A+RALARSG IGRIEDVTP+P D+ Sbjct: 7 WGVAHIFSSPNNTFVHITDITGSETASRVTGGMVVKADHEKPSPYAAMIAAARAAQQAMERGITAIHIKVRAPGGYGPKTPGPGAQAAIRALARSGFIIGRIEDVTPLPHDT 118
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_HYPBU (30S ribosomal protein S11P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps11p PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.530e-29 Identity = 64/113 (56.64%), Postives = 84/113 (74.34%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 525 +GVAHI++S+N+T IH+TDL+G ET+ R +GGM VKADR++ SPYAAMLAA + + + GI ALHIK+RA AQ+A+RALAR+G IGRIEDVTP+P D+T Sbjct: 10 WGVAHIYSSYNNTIIHITDLTGAETVARTSGGMVVKADREKPSPYAAMLAASRAAQQAMDRGIMALHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPLPHDTT 122
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_STAMF (30S ribosomal protein S11P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps11p PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.305e-29 Identity = 65/113 (57.52%), Postives = 83/113 (73.45%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 525 +GVAHI++S N+T IH+TDL+G ET+ R +GGM VKADR++ SPYAAM+AA + + GITALHIK+RA AQ+A+RALAR+G IGRIEDVTPIP D+T Sbjct: 10 WGVAHIYSSLNNTIIHITDLTGAETVSRWSGGMVVKADREKPSPYAAMIAASRAAAEAMDKGITALHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPIPHDTT 122
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS14_ENCCU (40S ribosomal protein S14 OS=Encephalitozoon cuniculi GN=RPS14 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.362e-29 Identity = 61/109 (55.96%), Postives = 79/109 (72.48%), Query Frame = 1 Query: 193 VAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTD 519 VAHI A+ NDTF+H+TD++G ET+ +ITGGM+VKA RDE SPYAAMLAAQDV+T+ G+ LH KLR AQ+A+R L R+G+++GRIEDVTP+ D Sbjct: 13 VAHIKATKNDTFVHITDMTGSETIAKITGGMRVKAQRDEGSPYAAMLAAQDVATKILGRGVKVLHFKLRGAGGVKPMALGPGAQTAIRTLIRAGLRVGRIEDVTPVARD 121
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_METLZ (30S ribosomal protein S11P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps11p PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.640e-28 Identity = 64/112 (57.14%), Postives = 83/112 (74.11%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 522 +G+AHIFASFN+T I VTDLSG ET+ + +GGM VK R+ESSPYAAM A +++ K+ GIT LHI++RA AQ+A+RAL+R+GM+IGRIEDVTP+P DS Sbjct: 8 WGIAHIFASFNNTIITVTDLSGAETICKSSGGMVVKQARNESSPYAAMQMAINIAQASKDKGITGLHIRVRAPGNGRQRSPGPGAQAAIRALSRAGMRIGRIEDVTPVPHDS 119
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_METTP (30S ribosomal protein S11P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps11p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.654e-28 Identity = 62/116 (53.45%), Postives = 82/116 (70.69%), Query Frame = 1 Query: 178 EHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 525 E + +AHI++SFN+T I +TDL+G ET+ +I+GGM VKA RDESSPY AM A V+ + K GI +H+K+RA AQ+A+RALAR+G++IGRIEDVTPIP D T Sbjct: 3 EGKWAIAHIYSSFNNTLITITDLTGAETIAKISGGMVVKAARDESSPYTAMQMAMQVAEQAKAKGIVGVHVKVRAPGGNKQRSPGPGAQAAIRALARAGLRIGRIEDVTPIPHDGT 118
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_META3 (30S ribosomal protein S11P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps11p PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.772e-28 Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 525 +GV HI+AS+N+T IHVTD++G ET+ +I+GGM VK +DESSPYAAM A ++ +E GI +HIK+RA AQ+A+RALAR+G+KIGRIED TPIP D T Sbjct: 5 WGVIHIYASYNNTIIHVTDITGAETIAKISGGMIVKNQKDESSPYAAMQGAFKIADMIREKGIDKVHIKVRATGGSKSKNPGPGAQAAIRALARAGIKIGRIEDATPIPHDGT 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_ARCFU (30S ribosomal protein S11P OS=Archaeoglobus fulgidus GN=rps11p PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.772e-28 Identity = 61/113 (53.98%), Postives = 81/113 (71.68%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 525 +G+AHI++S+N+T I +TD++G E + R++GGM VKADRDE +PY AM AA + KE GI +HIK+RA AQ+A+RALAR+G+KIGRIEDVTPIP D T Sbjct: 10 WGIAHIYSSYNNTIITITDITGAEIIARVSGGMIVKADRDEGNPYTAMQAALRAAAIAKEKGIDGVHIKVRAPGGNKHTTPGPGAQAAIRALARAGLKIGRIEDVTPIPHDGT 122
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_UNCMA (30S ribosomal protein S11P OS=Uncultured methanogenic archaeon RC-I GN=rps11p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.063e-27 Identity = 62/113 (54.87%), Postives = 82/113 (72.57%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 525 + +AHIF+SFN+T I VTDL+G ETL + +GGM VK DR+ESSPYAAM A +V+ + K GI +HI++RA AQ+A+R+LAR+G++IGRIEDVTPIP D T Sbjct: 9 WAIAHIFSSFNNTIITVTDLTGAETLAKTSGGMVVKQDRNESSPYAAMQMAMNVAEQIKAKGIQGVHIRVRAPGGNHQRSPGPGAQAAIRSLARAGLRIGRIEDVTPIPHDGT 121 The following BLAST results are available for this feature:
BLAST of DR404633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404633 ID=DR404633; Name=DR404633; organism=Citrus sinensis; type=EST; length=731bpback to top |