DR404633
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_METS3 (30S ribosomal protein S11P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps11p PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.451e-24 Identity = 54/113 (47.79%), Postives = 80/113 (70.80%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 525 +G+A+I++S+N+T I VTD++G ET+ + +GG V+ADR ++SP+AAM AA ++ KE G LHI++RA AQ+ +RALAR+G+KIG+IED+TPIP D T Sbjct: 7 WGIANIYSSYNNTIITVTDITGAETISQWSGGKVVRADRQQASPFAAMAAATRIADDAKEKGFVGLHIRVRAPGGNGHRSPGPGAQATIRALARAGIKIGKIEDITPIPHDGT 119
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_HALSA (30S ribosomal protein S11P OS=Halobacterium salinarium GN=rps11p PE=3 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.451e-24 Identity = 55/113 (48.67%), Postives = 78/113 (69.03%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 525 +G+AH+ ASFN+T + VTD +G ETL + +GG VK +RDE+SPYAAM A+ ++ + GI +H+++R AQ+A+RALAR+G++IGRIEDVTPIP D T Sbjct: 7 WGIAHVHASFNNTIMTVTDQTGAETLAKSSGGSVVKQNRDEASPYAAMQMAEQLAEEVLDQGIEKVHVRVRGPGGNLQRSPGPGAQAAIRALARAGLEIGRIEDVTPIPHDGT 119
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_METS5 (30S ribosomal protein S11P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps11p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.201e-24 Identity = 57/112 (50.89%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 522 +G+A I+AS N+T I +TD++G E + + +GGM VKADR++ SPYAAMLAA ++ + G+ A+HIK+RA AQ A+R+LARSG IGRIEDVTPIP D+ Sbjct: 9 WGLARIYASQNNTIITITDITGAEVISKASGGMMVKADREKPSPYAAMLAANKAASDALDKGLMAIHIKVRAPGGAGPKTPGPGAQPAIRSLARSGFIIGRIEDVTPIPHDT 120
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_HALMA (30S ribosomal protein S11P OS=Haloarcula marismortui GN=rps11p PE=1 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 1.216e-23 Identity = 53/116 (45.69%), Postives = 78/116 (67.24%), Query Frame = 1 Query: 178 EHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 525 E ++G+AH+ ASFN+T I +TD +G ETL + +GG VK +RDE+SPYAAM A+ V+ + + G+ + +++R AQ+ +RALAR+G++IGRIEDVTP P D T Sbjct: 6 EDIWGIAHVHASFNNTIITITDQTGAETLAKSSGGTVVKQNRDEASPYAAMQMAEVVAEKALDRGVEGVDVRVRGPGGNLQTSPGPGAQATIRALARAGLEIGRIEDVTPTPHDGT 121
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_SULAC (30S ribosomal protein S11P OS=Sulfolobus acidocaldarius GN=rps11p PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.589e-23 Identity = 57/112 (50.89%), Postives = 77/112 (68.75%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 522 +G A I+AS N+T I +TD++G E + + +GGM VKADR++ SPYAAMLAA + + GI+A+HIK+RA AQ A+RALAR+G IGRIEDVTP+P D+ Sbjct: 9 WGNARIYASQNNTIITITDITGAEIISKASGGMVVKADREKPSPYAAMLAANKAANDAFDKGISAIHIKVRAQGGYGSKTPGPGAQPAIRALARAGFIIGRIEDVTPLPHDT 120
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_PYRCJ (30S ribosomal protein S11P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps11p PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.589e-23 Identity = 56/112 (50.00%), Postives = 77/112 (68.75%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 522 +G+A I++S N+T I +TDL+G ET+ R++GGM V+AD+D+ SP+AAM AA + GI A+HIK+R A +A+RALARSG+ IGRIEDVTPIP D+ Sbjct: 18 WGIAWIYSSSNNTIITITDLTGAETVARVSGGMVVRADKDKPSPWAAMQAAYKAAQLALARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLVIGRIEDVTPIPHDT 129
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS14_PIG (40S ribosomal protein S14 (Fragment) OS=Sus scrofa GN=RPS14 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.075e-23 Identity = 55/78 (70.51%), Postives = 64/78 (82.05%), Query Frame = 1 Query: 118 RKNREPKEENV-TLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDV 348 RK +E KEE V +LGP V +GE+VFGV HIFAS NDTF+HVTDLSG E++ R+TGGMK+KADR E SPY AMLAAQ V Sbjct: 2 RKGKEKKEEQVISLGPQVAEGENVFGVCHIFASPNDTFVHVTDLSGXESICRVTGGMKMKADRXEXSPYXAMLAAQAV 79
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_PYRIL (30S ribosomal protein S11P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps11p PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.075e-23 Identity = 56/112 (50.00%), Postives = 77/112 (68.75%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 522 +G+A I++S N+T I +TDL+G ET+ R++GGM V+AD+D+ SP+AAM AA + GI A+HIK+R A +A+RALARSG+ IGRIEDVTPIP D+ Sbjct: 16 WGIAWIYSSSNNTIITITDLTGAETVARVSGGMVVRADKDKPSPWAAMQAAYKAAQLALARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLIIGRIEDVTPIPHDT 127
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_THEPD (30S ribosomal protein S11P OS=Thermofilum pendens (strain Hrk 5) GN=rps11p PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.710e-23 Identity = 54/111 (48.65%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 522 G+A I+AS+N+T IH+TDLSG ET+ +GGM KADRD+ SP+AAM AA + + GI +H+K++A A A+RAL R+G+ + RIEDVTP+PTDS Sbjct: 34 GIAWIYASYNNTIIHITDLSGAETIAFASGGMVAKADRDKPSPWAAMQAAARAAKIALDKGIRVVHVKIKAPGGYGPKTPGPGAGPAIRALVRAGLMVDRIEDVTPLPTDS 144
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_KORCO (30S ribosomal protein S11P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps11p PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.622e-23 Identity = 55/110 (50.00%), Postives = 73/110 (66.36%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTD 519 GVAHI++SFNDT +H+TD++G ETL R +GGM V ADR E SPYAA+ AA + + GIT L +K+RA A +A+R L+RS + + R+EDVTPIP D Sbjct: 10 GVAHIYSSFNDTIVHITDITGAETLARYSGGMFVDADRLEGSPYAALKAAMAAAKEAQRKGITHLIVKVRAPGGIKSRIPGPGATAAIRGLSRSQLTLIRVEDVTPIPHD 119 The following BLAST results are available for this feature:
BLAST of DR404633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404633 ID=DR404633; Name=DR404633; organism=Citrus sinensis; type=EST; length=731bpback to top |