DR404633
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_PYRAR (30S ribosomal protein S11P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps11p PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.037e-23 Identity = 55/111 (49.55%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTD 519 +G+A I++S N+T I +TDL+G ET+ R++GG V+AD+D+ SP+AAM AA + GI A+HIK+R A +A+RALARSG+ IGRIEDVTPIP D Sbjct: 15 WGIAWIYSSSNNTIITITDLTGAETVARVSGGQVVRADKDKPSPWAAMQAAYKAAQLAMARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLVIGRIEDVTPIPHD 125
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_PYRAE (30S ribosomal protein S11P OS=Pyrobaculum aerophilum GN=rps11p PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.884e-23 Identity = 55/111 (49.55%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTD 519 +G+A I++S N+T I +TDL+G ET+ R++GG V+AD+D+ SP+AAM AA + GI A+HIK+R A +A+RALARSG+ IGRIEDVTPIP D Sbjct: 10 WGIAWIYSSSNNTIITITDLTGAETVARVSGGQVVRADKDKPSPWAAMQAAYKAAQLALARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLVIGRIEDVTPIPHD 120
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_NANEQ (30S ribosomal protein S11P OS=Nanoarchaeum equitans GN=rps11p PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.756e-22 Identity = 58/112 (51.79%), Postives = 75/112 (66.96%), Query Frame = 1 Query: 187 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRA-XXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTD 519 +GVAHI++S N+T IH+TD++G ET+ +GGM V ADR E SP AA+LAA+ + KE GIT LHIK+RA A +A++ LAR G+KIG IEDVTP P D Sbjct: 6 WGVAHIYSSENNTIIHITDITGAETIAVGSGGMVVNADRLEGSPTAAILAAKRAAALAKERGITGLHIKVRAPGGHNGPWIPGPGASAAIKTLAREGLKIGIIEDVTPTPHD 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS14_TOBAC (40S ribosomal protein S14 (Fragment) OS=Nicotiana tabacum GN=RPS14 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.690e-14 Identity = 42/55 (76.36%), Postives = 42/55 (76.36%), Query Frame = 1 Query: 361 KELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 525 KELGI ALHIKLRA AQSALRALARSGMKIGRIEDVTPIPTDST Sbjct: 1 KELGINALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDST 55
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_CAUSK (30S ribosomal protein S11 OS=Caulobacter sp. (strain K31) GN=rpsK PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.648e-12 Identity = 44/108 (40.74%), Postives = 57/108 (52.78%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 GVAH+ ASFN+T I +TD G G M K R +S+PYAA +AA+D + E G+ L + + +SALRAL +GM I I DVTPIP Sbjct: 19 GVAHVNASFNNTMITITDAQGNTISWSSAGAMGFKGSR-KSTPYAAQMAAEDAGKKAAEHGVKTLEVNVSG--------PGSGRESALRALQAAGMTITTIRDVTPIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_PELCD (30S ribosomal protein S11 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=rpsK PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.152e-12 Identity = 39/108 (36.11%), Postives = 65/108 (60.19%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 G+AHI A+FN+T + +TD++G G M K R +S+P+AA +AA+D + + E G+ ++ ++++ +SALRAL+ +G+ I I+DVTPIP Sbjct: 21 GIAHIQATFNNTIVTITDIAGNVISWSTCGTMNFKGSR-KSTPFAAQIAAEDAAKKAMEHGLRSVEVRVKG--------PGSGRESALRALSSAGLNISVIKDVTPIP 119
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_CAUCR (30S ribosomal protein S11 OS=Caulobacter crescentus GN=rpsK PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12 Identity = 44/108 (40.74%), Postives = 57/108 (52.78%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 GVAH+ ASFN+T I +TD G G M K R +S+PYAA +AA+D + E G+ L + + +SALRAL +GM I I DVTPIP Sbjct: 19 GVAHVNASFNNTMITITDAQGNTISWSSAGMMGFKGSR-KSTPYAAQMAAEDAGKKAAEHGVKTLEVNVSG--------PGSGRESALRALQAAGMTITTIRDVTPIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_CAUCN (30S ribosomal protein S11 OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=rpsK PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12 Identity = 44/108 (40.74%), Postives = 57/108 (52.78%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 GVAH+ ASFN+T I +TD G G M K R +S+PYAA +AA+D + E G+ L + + +SALRAL +GM I I DVTPIP Sbjct: 19 GVAHVNASFNNTMITITDAQGNTISWSSAGMMGFKGSR-KSTPYAAQMAAEDAGKKAAEHGVKTLEVNVSG--------PGSGRESALRALQAAGMTITTIRDVTPIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_AZOC5 (30S ribosomal protein S11 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rpsK PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.262e-12 Identity = 43/108 (39.81%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 190 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 GVAH+ ASFN+T I +TD G G M K R +S+PYAA LAA+D + + E G+ L +++ +SALRAL +G + I DVTPIP Sbjct: 19 GVAHVNASFNNTMITITDAQGNTISWSSAGAMGFKGSR-KSTPYAAQLAAEDAARKAAEHGMRTLEVEVSG--------PGSGRESALRALQAAGFLVTSIRDVTPIP 117
BLAST of DR404633 vs. ExPASy Swiss-Prot
Match: RS11_METS4 (30S ribosomal protein S11 OS=Methylobacterium sp. (strain 4-46) GN=rpsK PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.178e-12 Identity = 43/110 (39.09%), Postives = 58/110 (52.73%), Query Frame = 1 Query: 184 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 513 V GVAH+ ASFN+T I +TD G G M K R +S+PYAA +AA+D + E G+ L +++ +SALRAL +G + I DVTPIP Sbjct: 17 VSGVAHVNASFNNTMITITDAQGNTISWSSAGAMGFKGSR-KSTPYAAQVAAEDAGRKAAEHGMRTLEVEVSG--------PGSGRESALRALQAAGFTVTSIRDVTPIP 117 The following BLAST results are available for this feature:
BLAST of DR404633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404633 ID=DR404633; Name=DR404633; organism=Citrus sinensis; type=EST; length=731bpback to top |