DR404627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_RICB8 (UDP-N-acetylmuramate--L-alanine ligase OS=Rickettsia bellii (strain OSU 85-389) GN=murC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11 Identity = 40/133 (30.08%), Postives = 70/133 (52.63%), Query Frame = 1 Query: 274 CTRQARSQTRKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 C+ K+TT S++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++TN+D EH+D ++D D + + FR F+ + G V C D + R L++ I + + Y Sbjct: 114 CSVAVSGSHGKTTTTSLVACLFEAAGLHPTVINGGIINNRSTNA--YLGSSNYLIAEADESDATFISIPSTIAIITNIDPEHLDYYKDFDTLINAFRSFITNLPFYGFAVCCIDHKIVRELVNNITERKVITY 244
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_ORITB (UDP-N-acetylmuramate--L-alanine ligase OS=Orientia tsutsugamushi (strain Boryong) GN=murC PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11 Identity = 37/114 (32.46%), Postives = 65/114 (57.02%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 645 K+TT +++A + +A G T I G + + + G G F+ EADE D F+ + ++AV+TN+D EH+D +++ D + S FR+F+ + G V C D ++L+ +I Sbjct: 124 KTTTTALIACIFEACGLHPTVITGGIMNNRATNA-YLGDGDYFIAEADESDATFIKIPATIAVITNIDVEHLDFYKNFDNLISAFRKFIINLPYDGFAVACIDDITVQNLIAKI 236
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_GEOMG (UDP-N-acetylmuramate--L-alanine ligase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=murC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11 Identity = 42/117 (35.90%), Postives = 66/117 (56.41%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT SM+A L G D T ++G + + G G+ V EADE DG FL LSP++AVVTN+D +H+D + + +K F F+ +I G V+C + + +L ++K+ Sbjct: 116 KTTTTSMVATALTHGGIDPTIVIGGKLNTLGTNAKL-GQGQFLVAEADESDGSFLKLSPTIAVVTNIDADHLDFYTGGIEQIKDTFVDFINKIPFYGLAVLCLEDRNIAEILPRVKK 231
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_COREF (UDP-N-acetylmuramate--L-alanine ligase OS=Corynebacterium efficiens GN=murC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11 Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSL 633 K++T SM L+A G D + +G + + + G G+ FV EADE D L +P +AVVTN++ +H+D F+ +A +F F ++ GG LV+C D A +L Sbjct: 134 KTSTTSMAVVALQAAGMDPSFAIGGQLNKAGTNA-HQGTGEAFVAEADESDASLLRYTPEIAVVTNIEPDHLDFFKTPEAYFQVFEDFADRLTPGGTLVVCLDDPGAAAL 242
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_CAUSK (UDP-N-acetylmuramate--L-alanine ligase OS=Caulobacter sp. (strain K31) GN=murC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11 Identity = 44/115 (38.26%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 648 K+TT SM+A +L A D T + G + + + G G V+EADE DG FL L +VA+VTN+D EH+D + DAVK F+ F++ I G +C D ++L +I+ Sbjct: 123 KTTTTSMVAALLDAGALDPTVVNGGIINAYGTNAKV-GEGDWIVVEADESDGSFLKLKSTVAIVTNIDAEHLDHWGTFDAVKKGFQDFIENIPFYGFAAVCTDHPEVQALTARIE 236
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_BORPE (UDP-N-acetylmuramate--L-alanine ligase OS=Bordetella pertussis GN=murC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 636 K+TT S++A VL A G D T ++G + + G G+ V+EADE D FL L P +A+VTN+D +H+D + D +KS F F +++ G ++C D R ++ Sbjct: 116 KTTTTSLVASVLAAGGLDPTFVIGGRLTS-AGANARLGQGEYIVVEADESDASFLNLLPVMAIVTNIDADHMDTYGHDVARLKSAFIEFTQRLPFYGSAILCADDANVREIM 226
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_BORPA (UDP-N-acetylmuramate--L-alanine ligase OS=Bordetella parapertussis GN=murC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 636 K+TT S++A VL A G D T ++G + + G G+ V+EADE D FL L P +A+VTN+D +H+D + D +KS F F +++ G ++C D R ++ Sbjct: 116 KTTTTSLVASVLAAGGLDPTFVIGGRLTS-AGANARLGQGEYIVVEADESDASFLNLLPVMAIVTNIDADHMDTYGHDVARLKSAFIEFTQRLPFYGSAILCADDANVREIM 226
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_BORBR (UDP-N-acetylmuramate--L-alanine ligase OS=Bordetella bronchiseptica GN=murC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 636 K+TT S++A VL A G D T ++G + + G G+ V+EADE D FL L P +A+VTN+D +H+D + D +KS F F +++ G ++C D R ++ Sbjct: 116 KTTTTSLVASVLAAGGLDPTFVIGGRLTS-AGANARLGQGEYIVVEADESDASFLNLLPVMAIVTNIDADHMDTYGHDVARLKSAFIEFTQRLPFYGSAILCADDANVREIM 226
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_BARQU (UDP-N-acetylmuramate--L-alanine ligase OS=Bartonella quintana GN=murC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11 Identity = 44/114 (38.60%), Postives = 63/114 (55.26%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 645 K+TT SM+A +L A D I G + + + G G V+EADE DG FL L +AVVTN+D EH+D + AV+ FR+F++ + G V+C D +SL +I Sbjct: 118 KTTTTSMIAALLDAGRFDPMVINGGIINAYGTNARM-GSGDWMVVEADESDGTFLKLPADIAVVTNIDREHLDHYGSFCAVREAFRQFVENVPFYGFAVLCLDHPEVQSLASRI 230
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_PSEF5 (UDP-N-acetylmuramate--L-alanine ligase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=murC PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.361e-11 Identity = 44/119 (36.97%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 657 K+TT S+LA V A G D T ++G + + G + + EADE D FL L P VAVVTN+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+ T Sbjct: 127 KTTTTSLLASVFAAGGLDPTFVIGGRLNAAGTNAQL-GTSRYLIAEADESDASFLHLQPLVAVVTNIDADHMATYDGDFNKLKKTFVDFLHNLPFYGLAVMCLDDPVVREILPQVKRPT 244 The following BLAST results are available for this feature:
BLAST of DR404627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404627 ID=DR404627; Name=DR404627; organism=Citrus sinensis; type=EST; length=726bpback to top |