DR404627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_LEPCP (UDP-N-acetylmuramate--L-alanine ligase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=murC PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.361e-11 Identity = 41/117 (35.04%), Postives = 63/117 (53.85%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT S++ VL G D T ++G + S G G V+EADE D FL L P ++V+TN+D +H+D + D +K F FL ++ G ++CGD RS++ I + Sbjct: 116 KTTTTSLVTSVLAEAGLDPTFVIGGKLNSAGANSAL-GKGDYIVVEADESDASFLNLLPVLSVITNIDADHMDTYGHDFARLKQAFVEFLHKMPFYGAAILCGDDPGVRSIIPMISR 231
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_LAWIP (UDP-N-acetylmuramate--L-alanine ligase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=murC PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.361e-11 Identity = 37/116 (31.90%), Postives = 62/116 (53.45%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT S+ A V G D T ++G + + + G G+ + EADE DG FL L P + VVTN+D +H+D + + ++ F F+ + G V+CGD + +L ++ + Sbjct: 116 KTTTTSLTATVFDTAGFDPTVVIGGVLNAY-GANARLGQGQYLIAEADESDGSFLLLLPIINVVTNIDLDHLDYYRSFEEIEHAFVTFMNNVPFYGMNVVCGDDPGVQRVLPRVNR 230
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_AZOVD (UDP-N-acetylmuramate--L-alanine ligase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=murC PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.361e-11 Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 657 K+TT S++A V A G D T ++G + + G + + EADE D FL L P VAVVTN+D +H+D +E D +K F FL + G V+C D R +L + + T Sbjct: 129 KTTTTSLIASVFAAGGLDPTFVIGGRLNAAGTNAQL-GSSRYLIAEADESDASFLHLQPMVAVVTNIDADHMDTYEGDFSRLKKTFVDFLHNLPFYGLAVLCVDDPVVREILPLVARPT 246
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_RHORT (UDP-N-acetylmuramate--L-alanine ligase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=murC PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11 Identity = 40/122 (32.79%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 K+TT S++A +L A G D T I G + + + G G+ V+EADE DG F L ++++VTN+D EH+D + D V+ FR F+ + G +C D ++++ Q++ + Y Sbjct: 119 KTTTTSLVAQLLDAAGLDPTVINGG-ILNARGTNAYLGTGEWMVVEADESDGTFTKLPATISLVTNIDPEHLDFYGTFDKVREAFRAFIHNLPFYGFACMCIDHPEVQAMIPQLQDRKIITY 239
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_NITEU (UDP-N-acetylmuramate--L-alanine ligase OS=Nitrosomonas europaea GN=murC PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11 Identity = 40/115 (34.78%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 645 K+TT S++A +L G D T ++G + D G G+ V+EADE D FL L P + VVTN+D +H+ +E D + +K F F++ + G V+C D R ++ I Sbjct: 116 KTTTTSLVASILAEAGQDPTFVIGGKLKTV-DSHARLGKGEFIVVEADESDASFLYLQPVLTVVTNIDADHMSTYEHDFNRLKQTFVEFIEHLPFYGMAVLCVDDPHVREIISMI 229
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_GLOVI (UDP-N-acetylmuramate--L-alanine ligase OS=Gloeobacter violaceus GN=murC PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11 Identity = 40/108 (37.04%), Postives = 62/108 (57.41%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCAR 627 K+TT+S++A +L G D T +VG V + G+ G G + V E DE DG + SP VAVVTN++ +H+D + + + + F+++ Q RV +V C D Q R Sbjct: 122 KTTTSSLIAVMLYHCGLDPTVVVGGEVDEL-GGNARLGSGPHLVAEVDESDGSLVLFSPEVAVVTNIEGDHLDHYANLEQIVEAFQQYANQARV---VVGCLDCQAVR 225
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_CLOD6 (UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium difficile (strain 630) GN=murC PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11 Identity = 38/122 (31.15%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 K++T SML+ + + D T +VG ++ G++ G +F+ EA EY FL +P +++V N++ +H+D F D +K+ F +F K + G+ +I GD + +L +K T +KY Sbjct: 113 KTSTTSMLSTIFEYADLDPTILVGGNLSMI-GGNVKIGNSNHFITEACEYVDSFLNFNPKISIVLNVEEDHLDYFSGIDEIKASFNKFGKLLPPEGYFIINGDDENIDDILYDVKA-TIIKY 232
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_BORA1 (UDP-N-acetylmuramate--L-alanine ligase OS=Bordetella avium (strain 197N) GN=murC PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 636 K+TT S++A VL A G D T ++G + + G G+ V+EADE D FL L P +A++TN+D +H+D + D +KS F F +++ G V+C D R ++ Sbjct: 116 KTTTTSLVASVLAAGGLDPTFVIGGRLNS-AGANAQLGQGEFIVVEADESDASFLNLLPVMAIITNIDADHMDTYGHDVARLKSAFIEFTQRLPFYGSAVLCADDANVREIM 226
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_RICTY (UDP-N-acetylmuramate--L-alanine ligase OS=Rickettsia typhi GN=murC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11 Identity = 38/132 (28.79%), Postives = 66/132 (50.00%), Query Frame = 1 Query: 274 CTRQARSQTRKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 C+ K+TT S++A + +A G T I G + + + G + EADE D F+ + ++A++TN+D EH+D ++D + + FR F+ + G V C D + R L+D I + + Y Sbjct: 114 CSVAVSGSHGKTTTTSLIACLFEAAGLYPTVINGGIINN-KSTNAYLGSSNYLIAEADESDATFIHIPSTIAIITNIDPEHLDYYQDFEILIGAFRSFITNLPFYGFAVCCIDHKIVRKLVDDITERKIITY 244
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_RICPR (UDP-N-acetylmuramate--L-alanine ligase OS=Rickettsia prowazekii GN=murC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11 Identity = 38/132 (28.79%), Postives = 66/132 (50.00%), Query Frame = 1 Query: 274 CTRQARSQTRKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 C+ K+TT S++A + +A G T I G + + + G + EADE D F+ + ++A++TN+D EH+D ++D + + FR F+ + G V C D + R L+D I + + Y Sbjct: 114 CSVAVSGSHGKTTTTSLIACLFEAAGLCPTVINGGIINN-KSTNAYLGSSNYLIAEADESDATFIHIPSTIAIITNIDPEHLDYYQDFEILIGAFRSFITNLPFYGFAVCCIDHKIVRKLVDDITERKIITY 244 The following BLAST results are available for this feature:
BLAST of DR404627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404627 ID=DR404627; Name=DR404627; organism=Citrus sinensis; type=EST; length=726bpback to top |