DR404627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_ANADE (UDP-N-acetylmuramate--L-alanine ligase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=murC PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.338e-14 Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT SM A++L G D TA+VG V F + G G V+EADE DG FL + P++A+VTN+D EH+D ++ DA++ F F+ ++ G ++C D +S+L +++ Sbjct: 119 KTTTTSMAAHLLAHAGLDPTAVVGGKVNAFGSNAKL-GKGDYMVVEADESDGSFLRIPPTIAIVTNIDPEHLDHWKTPDALRRGFVDFVNRVPFYGLAILCIDHPTVQSILPDVEK 233
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_ANAD2 (UDP-N-acetylmuramate--L-alanine ligase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=murC PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.338e-14 Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT SM A++L G D TA+VG V F + G G V+EADE DG FL + P++A+VTN+D EH+D ++ DA++ F F+ ++ G ++C D +S+L +++ Sbjct: 119 KTTTTSMAAHLLAHAGLDPTAVVGGKVNAFGSNAKL-GKGDYMVVEADESDGSFLRIPPTIAIVTNIDPEHLDHWKTPDALRRGFVDFVNRVPFYGLAILCIDHPTVQSILPDVEK 233
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_MYCVP (UDP-N-acetylmuramate--L-alanine ligase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=murC PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14 Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 645 K+TT SML L+ G D + VG + + + +G G +FV EADE DG L P + VVTN++ +H+D F +A +F RF +I GG LV+C D AR+L +++ Sbjct: 130 KTTTTSMLIVALQHSGFDPSFAVGGDLGEAGTNA-HHGSGSSFVAEADESDGSLLEYRPDIVVVTNIEADHLDFFGSVEAYTEVFDRFAGRIDPGGALVVCVDDPGARALAERL 242
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_DESVV (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=murC PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14 Identity = 43/116 (37.07%), Postives = 63/116 (54.31%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT S+ A + G D T I+G + + + G G+ + EADE DG FL L P V VVTN+D +HVD + + + F F+ ++ G V+CGD R LL Q+K+ Sbjct: 116 KTTTTSLTAAIFDVAGKDPTVIIGGRLNAY-GANARLGEGEYLIAEADESDGSFLCLFPIVNVVTNVDMDHVDFYAGQKEIDEAFVTFMNKVPFYGANVVCGDDPGVRRLLPQVKR 230
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_DESVH (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=murC PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14 Identity = 43/116 (37.07%), Postives = 63/116 (54.31%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT S+ A + G D T I+G + + + G G+ + EADE DG FL L P V VVTN+D +HVD + + + F F+ ++ G V+CGD R LL Q+K+ Sbjct: 116 KTTTTSLTAAIFDVAGKDPTVIIGGRLNAY-GANARLGEGEYLIAEADESDGSFLCLFPIVNVVTNVDMDHVDFYAGQKEIDEAFVTFMNKVPFYGANVVCGDDPGVRRLLPQVKR 230
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_SALRD (UDP-N-acetylmuramate--L-alanine ligase OS=Salinibacter ruber (strain DSM 13855) GN=murC PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.282e-14 Identity = 41/116 (35.34%), Postives = 70/116 (60.34%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT SM V+ G D T IVG V F +I G G V+EADEYD FL L+PS+AV+T+++ +H+D++ED A+++ F ++ + G ++C D ++++ +++ Sbjct: 125 KTTTTSMAGLVVAEGGFDPTVIVGGKVTAFGSNAIT-GEGDVLVIEADEYDRTFLRLTPSLAVITSIEEDHLDVYEDLAAIQASFTQYANSVPFFGAAILCLDDPNVQAIVGDVER 239
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_RUBXD (UDP-N-acetylmuramate--L-alanine ligase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=murC PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.282e-14 Identity = 43/112 (38.39%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLD 639 K+TT SM+A+ L+A+G++ TA+VG + IF G V EADE D L L P AV+TN++++H D + + V F RF+ + GHLV+C D R L + Sbjct: 111 KTTTTSMIAHSLRALGENPTALVGGELNDIGSNVIF-GREDLIVAEADESDRSILRLHPQAAVITNIEYDHPDFYASLEEVVETFARFVAGLPPEGHLVLCADDPRCRRLAE 221
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_ROSS1 (UDP-N-acetylmuramate--L-alanine ligase OS=Roseiflexus sp. (strain RS-1) GN=murC PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.282e-14 Identity = 37/103 (35.92%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 612 K+TT +++A +L G + ++G P + + V+EADEYD FL L+P VAV+TN++W+HVDI+ D ++ FR F +++ L++CGD Sbjct: 111 KTTTTALIALMLTQAGGNPGFLIGGETPDLGIHARWGDPAAPLVVEADEYDRTFLALTPDVAVMTNVEWDHVDIYPSPDNYEAAFRLFTRRVAQPQRLIVCGD 213
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_SINMW (UDP-N-acetylmuramate--L-alanine ligase OS=Sinorhizobium medicae (strain WSM419) GN=murC PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.980e-14 Identity = 48/122 (39.34%), Postives = 72/122 (59.02%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 K+TT SM+A +L A G D T I G + + + G G+ V+EADE DG FL L +AVVTN+D EH+D + DAV+S FR+F++ + G V+C D +S++ +I+ + Y Sbjct: 118 KTTTTSMVAALLDAGGLDPTVINGGIINAYGTNARM-GAGEWMVVEADESDGTFLKLPADIAVVTNIDPEHLDHYGSFDAVRSAFRQFVENVPFYGFGVLCLDHPEVQSMVGKIEDRKVVTY 238
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_MOOTA (UDP-N-acetylmuramate--L-alanine ligase OS=Moorella thermoacetica (strain ATCC 39073) GN=murC PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.980e-14 Identity = 37/103 (35.92%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 612 K+TT++++A V+K G + A++G +V +F + + G G V EADE DG FL L P +A++TN++ +H++ + D + + F+ F+ QIR GG ++C + Sbjct: 119 KTTTSALVALVMKEGGLEPAAVIGGYVREFASNA-YPGRGDFLVAEADESDGSFLWLKPEIALITNIEADHLEHYGSLDRIVAAFKDFIDQIRPGGKAILCAE 220 The following BLAST results are available for this feature:
BLAST of DR404627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404627 ID=DR404627; Name=DR404627; organism=Citrus sinensis; type=EST; length=726bpback to top |