DR404627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_PSEAB (UDP-N-acetylmuramate--L-alanine ligase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=murC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 44/119 (36.97%), Postives = 62/119 (52.10%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 657 K+TT S++A V A G D T ++G + + G + V EADE D FL L P VAVVTN+D +H+ + D + +K F FL + G V+C D R +L QI + T Sbjct: 126 KTTTTSLIASVFAAGGLDPTFVIGGRLNAAGTNAQL-GASRYLVAEADESDASFLHLQPMVAVVTNIDADHMATYGGDFNKLKKTFVEFLHNLPFYGLAVMCVDDPVVREILPQIARPT 243
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_PSEA8 (UDP-N-acetylmuramate--L-alanine ligase OS=Pseudomonas aeruginosa (strain LESB58) GN=murC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 44/119 (36.97%), Postives = 62/119 (52.10%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 657 K+TT S++A V A G D T ++G + + G + V EADE D FL L P VAVVTN+D +H+ + D + +K F FL + G V+C D R +L QI + T Sbjct: 126 KTTTTSLIASVFAAGGLDPTFVIGGRLNAAGTNAQL-GASRYLVAEADESDASFLHLQPMVAVVTNIDADHMATYGGDFNKLKKTFVEFLHNLPFYGLAVMCVDDPVVREILPQIARPT 243
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_PSEA7 (UDP-N-acetylmuramate--L-alanine ligase OS=Pseudomonas aeruginosa (strain PA7) GN=murC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 44/119 (36.97%), Postives = 62/119 (52.10%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 657 K+TT S++A V A G D T ++G + + G + V EADE D FL L P VAVVTN+D +H+ + D + +K F FL + G V+C D R +L QI + T Sbjct: 126 KTTTTSLIASVFAAGGLDPTFVIGGRLNAAGTNAQL-GASRYLVAEADESDASFLHLQPMVAVVTNIDADHMATYGGDFNKLKKTFVEFLHNLPFYGLAVMCVDDPVVREILPQIARPT 243
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_PSE14 (UDP-N-acetylmuramate--L-alanine ligase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=murC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 657 K+TT S++A V A G D T ++G + + G + + EADE D FL L P VAVVTN+D +H+ +E D + +K F FL + G V+C D R +L +K+ T Sbjct: 127 KTTTTSLIASVFAAGGLDPTFVIGGRLNAAGTNAQL-GTSRYLIAEADESDASFLHLQPLVAVVTNIDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCIDDPVVREILPLVKRPT 244
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_HERAR (UDP-N-acetylmuramate--L-alanine ligase OS=Herminiimonas arsenicoxydans GN=murC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT S++A VL G D T ++G + + G G+ V EADE D FL LSP + V+TN+D +H++ +E D + +K F F +++ G V+C D R ++ +I + Sbjct: 116 KTTTTSLVASVLAEGGLDPTFVIGGLLNS-AGANAKLGAGEFIVAEADESDASFLNLSPVIEVITNIDADHMETYEHDFEKLKQAFVEFTQRLPFYGVAVLCLDDATVREIMPRISK 231
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_ACIC1 (UDP-N-acetylmuramate--L-alanine ligase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=murC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 41/110 (37.27%), Postives = 61/110 (55.45%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSL 633 K+TT SM+ L+ G D + +GA + + P + G G FV EADE D FL L AVVTN++ +H++ + D A+ + F RF+ ++ GG LV C D A + Sbjct: 129 KTTTTSMVVRALQRCGADPSFAIGADLGE-PGSNAHDGTGSIFVAEADESDESFLLLPFHAAVVTNVEADHLNHYADLAAIHAAFDRFVAKVPDGGFLVACTDDPGAEEI 237
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_ACIBL (UDP-N-acetylmuramate--L-alanine ligase OS=Acidobacteria bacterium (strain Ellin345) GN=murC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 43/116 (37.07%), Postives = 63/116 (54.31%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT SM+A VL D T IVG V + G V EADE D FL L AVVTN+D EH+D + D + V+ F F+ ++ G +V C D++ R++L ++++ Sbjct: 116 KTTTTSMVAAVLAGGELDPTVIVGGRVDAMGSNARL-GKSHYLVAEADESDRSFLKLWFIHAVVTNIDREHMDTYHDMEDVERTFVEFMDRVPFYGMVVACNDNEPLRAILPRVRR 230
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_VARPS (UDP-N-acetylmuramate--L-alanine ligase OS=Variovorax paradoxus (strain S110) GN=murC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11 Identity = 40/115 (34.78%), Postives = 63/115 (54.78%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 645 K+TT S++A VL A G D T ++G + + G G V+EADE D FL L P +AVVTN+D +H++ + D +K F FL ++ G ++C D R ++ ++ Sbjct: 116 KTTTTSLVASVLDAAGLDPTFVIGGRLNS-AGANAQLGSGDYIVVEADESDASFLNLLPVMAVVTNIDADHMETYGHDFAKLKKAFVDFLHRMPFYGVAILCTDDPAVRDIVAEV 229
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_THIDA (UDP-N-acetylmuramate--L-alanine ligase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=murC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11 Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 645 K+TT S++A +L G D T ++G + + G G V EADE D FL L+P +A+VTN+D +H+D + D D +K+ F F +++ G V+C D R +L +I Sbjct: 116 KTTTTSLVASILGEAGMDPTYVIGGKLTAAGTNARL-GQGDFLVAEADESDASFLYLTPVIAIVTNIDADHMDTYGHDFDRLKTAFVDFCQRLPFYGMAVLCIDDANVREILPRI 229
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_RICCN (UDP-N-acetylmuramate--L-alanine ligase OS=Rickettsia conorii GN=murC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11 Identity = 37/126 (29.37%), Postives = 63/126 (50.00%), Query Frame = 1 Query: 274 CTRQARSQTRKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 C+ K+TT S++A + +A G T I G + + + G + EADE D F+ + ++A++TN+D EH+D + D + + FR F+ + G V C D + R L+D I + Sbjct: 114 CSVAVSGSHGKTTTTSLVACLFEAAGLCPTVINGGIINN-KSTNAYLGSSNYLIAEADESDATFIHIPSTIAIITNIDPEHLDYYRDFETLIGAFRSFITNLPFYGFAVCCIDHKIVRKLVDDITE 238 The following BLAST results are available for this feature:
BLAST of DR404627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR404627 ID=DR404627; Name=DR404627; organism=Citrus sinensis; type=EST; length=726bpback to top |