DR404627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_BRASB (UDP-N-acetylmuramate--L-alanine ligase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=murC PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.980e-14 Identity = 48/122 (39.34%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 K+TT SM+A +L A G D T I G + + + G G V+EADE DG FL L VA+VTN+D EH+D F+ DAV+ FR F++ + G V+C D ++L+ +I+ + Y Sbjct: 118 KTTTTSMVAALLDAGGIDPTVINGGIINAYGTNARL-GAGDWMVVEADESDGTFLKLPADVAIVTNVDPEHLDHFKTFDAVQDAFRAFVENVPFYGFAVMCIDHPVVQALVGKIEDRRIITY 238
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_RHOPT (UDP-N-acetylmuramate--L-alanine ligase OS=Rhodopseudomonas palustris (strain TIE-1) GN=murC PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.892e-14 Identity = 48/122 (39.34%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 K+TT SM+A +L A D T I G + + + GGG V+EADE DG FL L VA+VTN+D EH+D F+ DAV+ FR F++ + G V+C D ++L+ +I+ + Y Sbjct: 118 KTTTTSMVAALLDAGDLDPTVINGGIINAYGTNARL-GGGDWMVVEADESDGTFLKLPADVAIVTNVDPEHLDHFKTFDAVQDAFRNFVENVPFYGFAVMCIDHPVVQTLVGKIEDRRIITY 238
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_RHOPA (UDP-N-acetylmuramate--L-alanine ligase OS=Rhodopseudomonas palustris GN=murC PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.892e-14 Identity = 48/122 (39.34%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 K+TT SM+A +L A D T I G + + + GGG V+EADE DG FL L VA+VTN+D EH+D F+ DAV+ FR F++ + G V+C D ++L+ +I+ + Y Sbjct: 118 KTTTTSMVAALLDAGDLDPTVINGGIINAYGTNARL-GGGDWMVVEADESDGTFLKLPADVAIVTNVDPEHLDHFKTFDAVQDAFRNFVENVPFYGFAVMCIDHPVVQTLVGKIEDRRIITY 238
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_RHISN (UDP-N-acetylmuramate--L-alanine ligase OS=Rhizobium sp. (strain NGR234) GN=murC PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.892e-14 Identity = 47/122 (38.52%), Postives = 73/122 (59.84%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 K+TT SM+A +L A G D T I G + + + G G+ V+EADE DG FL L +AVVTN+D EH+D + + DAV++ FR+F++ + G V+C D +S++ +I+ + Y Sbjct: 118 KTTTTSMVAALLDAGGLDPTVINGGIINAYGTNARM-GAGEWMVVEADESDGTFLKLPADIAVVTNIDPEHLDHYGNFDAVRAAFRQFVENVPFYGFGVLCLDHPEVQSMVGKIEDRKVITY 238
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_MYCLE (UDP-N-acetylmuramate--L-alanine ligase OS=Mycobacterium leprae GN=murC PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.892e-14 Identity = 44/110 (40.00%), Postives = 64/110 (58.18%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSL 633 K+TT SML L+ G D + +VG + + +G G FV EADE DG L +P+VAVVTN+D +H+D + DA +F F+++ +GG LV+C D A +L Sbjct: 126 KTTTTSMLVVALQHCGCDPSFVVGGELAVVGTNA-HHGLGACFVAEADESDGSLLEYTPNVAVVTNIDSDHLDFYGSVDAYIRVFDSFVERFALGGALVVCNDDPGAAAL 234
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_MYCLB (UDP-N-acetylmuramate--L-alanine ligase OS=Mycobacterium leprae (strain Br4923) GN=murC PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.892e-14 Identity = 44/110 (40.00%), Postives = 64/110 (58.18%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSL 633 K+TT SML L+ G D + +VG + + +G G FV EADE DG L +P+VAVVTN+D +H+D + DA +F F+++ +GG LV+C D A +L Sbjct: 126 KTTTTSMLVVALQHCGCDPSFVVGGELAVVGTNA-HHGLGACFVAEADESDGSLLEYTPNVAVVTNIDSDHLDFYGSVDAYIRVFDSFVERFALGGALVVCNDDPGAAAL 234
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_GEOSF (UDP-N-acetylmuramate--L-alanine ligase OS=Geobacter sp. (strain FRC-32) GN=murC PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.892e-14 Identity = 43/116 (37.07%), Postives = 66/116 (56.90%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT SM+A +L G D T ++G + + G GK V EADE DG FL LSP++AVVTN+D +H+D + + +K F F+ +I G V+C D+ ++ +K+ Sbjct: 116 KTTTTSMVATILATGGIDPTIVIGGRLNSIGTNARL-GQGKFLVAEADESDGSFLKLSPTIAVVTNIDADHLDFYSGIEEIKDTFVEFINKIPFYGLAVLCLDNGNVADIIPLVKK 230
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_CHLP8 (UDP-N-acetylmuramate--L-alanine ligase OS=Chlorobaculum parvum (strain NCIB 8327) GN=murC PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.892e-14 Identity = 41/116 (35.34%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT +M+A +L G T ++G V + GS G G++ V+EADEYD FL L+P++AVV +L+ EH+D + D ++ F F ++ G ++ C D RSL+ ++ + Sbjct: 118 KTTTTAMIATMLLESGQSPTVMIGG-VSDYLKGSTVVGEGRHMVIEADEYDRAFLKLTPTIAVVNSLESEHMDTYGTMDNLRDSFAAFANKVPFYGRVICCVDWPEIRSLISRLNR 232
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_METRJ (UDP-N-acetylmuramate--L-alanine ligase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=murC PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14 Identity = 48/122 (39.34%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 K+TT S++A +L A D T I G + + + G G+ V+EADE DG FL L VA+VTN+D EH+D F DA+K FRRF+ I G V+C D + L+ I+ + Y Sbjct: 118 KTTTTSLVATLLDAGNLDPTVINGGIINAYGTNARM-GAGEWMVVEADESDGTFLKLPADVAIVTNIDPEHLDHFGSFDAIKDAFRRFIDNIPFYGFAVMCIDHPVVQDLVGHIEDRRIITY 238
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_CORU7 (UDP-N-acetylmuramate--L-alanine ligase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=murC PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14 Identity = 46/138 (33.33%), Postives = 76/138 (55.07%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK----QDTGLKYSGGVVSNQSSDL 705 K++T SM ++A G D + +G + + + +G G+ F+ EADE DG FL SP VAV+TN++ +H+D + E+A +IF F ++ GG+LV C D A +L +++ T L Y ++Q D+ Sbjct: 126 KTSTTSMAVVGVQAAGLDPSFAIGGQLNRAGTNA-HHGTGEIFIAEADESDGSFLSYSPEVAVITNIEPDHLDYYGTEEAYVAIFDEFATKVTPGGYLVCCLDDPGAAALAARVRAAGTAPTVLGYGSRAAADQHPDI 262 The following BLAST results are available for this feature:
BLAST of DR404627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404627 ID=DR404627; Name=DR404627; organism=Citrus sinensis; type=EST; length=726bpback to top |