DR404627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_RHIEC (UDP-N-acetylmuramate--L-alanine ligase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=murC PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14 Identity = 47/122 (38.52%), Postives = 74/122 (60.66%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 K+TT S++A +L+A G D T I G + + + G G+ V+EADE DG FL L VAV+TN+D EH+D + + DAV++ FR+F++ + G V+C D +SL+ +I+ + Y Sbjct: 118 KTTTTSLVATLLEAGGLDPTVINGGIINAYGTNARM-GEGEWMVVEADESDGTFLKLPADVAVITNIDPEHLDHYGNFDAVRAAFRQFVENVPFYGFGVMCLDHPEVQSLVGRIEDRKIITY 238
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_METS4 (UDP-N-acetylmuramate--L-alanine ligase OS=Methylobacterium sp. (strain 4-46) GN=murC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14 Identity = 47/122 (38.52%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 K+TT S++A +L A G D T I G + + + G G+ V+EADE DG FL L +A+VTN+D EH+D F DA+K FR F+ I G V+C D + L+ +I+ + Y Sbjct: 118 KTTTTSLVATLLDAGGLDPTVINGGIINAYGTNARM-GEGEWMVVEADESDGTFLKLPADIAIVTNIDPEHLDHFGSFDAIKDAFRAFIDNIPFYGFAVMCIDHPTVQDLVGRIEDRRIITY 238
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_METPB (UDP-N-acetylmuramate--L-alanine ligase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=murC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14 Identity = 48/122 (39.34%), Postives = 66/122 (54.10%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 K+TT S++A +L A D T I G + + + G G V+EADE DG FL L VA+VTN+D EH+D F DA+K FRRF+ I G V+C D + L+ I+ + Y Sbjct: 118 KTTTTSLVATLLDAGNLDPTVINGGIINAYGTNARM-GAGDWMVVEADESDGTFLKLPADVAIVTNIDPEHLDHFGSFDAIKDAFRRFIDNIPFYGFAVMCIDHPIVQDLVGHIEDRRIITY 238
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_MAGSM (UDP-N-acetylmuramate--L-alanine ligase OS=Magnetococcus sp. (strain MC-1) GN=murC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14 Identity = 49/117 (41.88%), Postives = 67/117 (57.26%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD----SQCARSLLDQ 642 K+TT S++A +L A D T + G V + G G V EADE DG FL LSP++AVVTN+D EH++ + DAV+ FR F+ +I G V+CGD S A +LD+ Sbjct: 116 KTTTTSLVAALLGAADMDPTVVNGGIVKSLGSNA-HVGQGAFLVTEADESDGSFLKLSPTIAVVTNMDPEHMNHYGTFDAVREAFRGFVSKIPFYGLAVLCGDHPEVSLLAEEMLDK 231
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_GEOBB (UDP-N-acetylmuramate--L-alanine ligase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=murC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14 Identity = 43/116 (37.07%), Postives = 67/116 (57.76%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT SM+A +L G D T ++G + + G G+ V EADE DG FL LSP++AVVTN+D +H+D + + +K F F+ +I G V+C D+ +L ++K+ Sbjct: 116 KTTTTSMVATILSKGGIDPTIVIGGRLNSLGTNARL-GQGQFLVAEADESDGSFLLLSPTIAVVTNIDADHLDFYSGIEEIKDTFVEFINKIPFYGLAVLCLDNGNIADVLPRVKK 230
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_DESDA (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=murC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14 Identity = 41/116 (35.34%), Postives = 65/116 (56.03%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT S+ A + G D T I+G + + + G G+ + EADE DG FL L P + VVTN+D +H+D ++ +A+ S F +F+ + G ++CGD LL Q+K+ Sbjct: 116 KTTTTSLTASIFDEAGLDPTVIIGGRLNVY-GANAHLGHGEYLIAEADESDGSFLCLLPIINVVTNVDEDHLDHYKTREAINSAFVQFMNNVPFYGLNIVCGDDPGVLELLPQVKR 230
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_DESAH (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=murC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14 Identity = 40/114 (35.09%), Postives = 68/114 (59.65%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 645 K++T +M+A +L G D T +VG + + +G G V EADE DG FL +P++A VTN+D EH+D ++D + +K F +F+ + G V+C D++ +++L +I Sbjct: 116 KTSTTAMIATILNQAGLDPTVVVGGLLKSIGTNA-HHGKGDYIVAEADESDGSFLKYAPAIAAVTNIDLEHLDFYKDIEDIKDNFVKFINSVPFYGLAVLCLDNEHIQAILPRI 228
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_BRAJA (UDP-N-acetylmuramate--L-alanine ligase OS=Bradyrhizobium japonicum GN=murC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14 Identity = 47/122 (38.52%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 K+TT +M+A +L A G D T I G + + + G G V+EADE DG FL L VA+VTN+D EH+D F+ +AV+ FR F++ + G V+C D +SL+ +I+ + Y Sbjct: 118 KTTTTTMVATLLDAGGLDPTVINGGIINAYGSNARL-GAGDWMVVEADESDGTFLKLPTDVAIVTNVDPEHLDHFKTFEAVQDAFRHFVENLPFYGFAVMCIDHPVVQSLVGKIEDRRIITY 238
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_PELTS (UDP-N-acetylmuramate--L-alanine ligase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=murC PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13 Identity = 41/111 (36.94%), Postives = 63/111 (56.76%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 636 K+TT SM A VL+ G D T ++G + + G+ G G+ V EADE DG FL L P + ++TN++ +H+D + + + + FRRF+ ++ G V C D R LL Sbjct: 115 KTTTTSMTALVLEKNGMDPTIVIGGELSEI-GGNAKLGRGEYLVAEADESDGSFLKLDPVIEIITNIEDDHLDYYRSVENILAAFRRFMAKVPESGLAVACLDDPRLRELL 224
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_NITHX (UDP-N-acetylmuramate--L-alanine ligase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=murC PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13 Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 648 K+TT SM+A +L A D T I G + + + G G+ V+EADE DG FL L VA+VTN+D EH+D F+ DAV+ FR F++ + G V+C D +S++ +I+ Sbjct: 118 KTTTTSMVAALLDAGDFDPTVINGGIINAYGTNARL-GAGEWMVVEADESDGTFLKLPTDVAIVTNVDPEHLDHFKTFDAVQDAFRSFVENVPFYGFAVMCIDHPVVQSMVGRIE 231 The following BLAST results are available for this feature:
BLAST of DR404627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404627 ID=DR404627; Name=DR404627; organism=Citrus sinensis; type=EST; length=726bpback to top |