DR404627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_RHOPS (UDP-N-acetylmuramate--L-alanine ligase OS=Rhodopseudomonas palustris (strain BisB5) GN=murC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13 Identity = 48/122 (39.34%), Postives = 69/122 (56.56%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 K+TT SM+A +L A D T I G + + + G G V+EADE DG FL L VAVVTN+D EH+D F+ DAV+ FR F++ + G V+C D ++L+ +I+ + Y Sbjct: 118 KTTTTSMVAALLDAGDVDPTVINGGIINAYGTNARL-GAGDWMVVEADESDGTFLKLPADVAVVTNVDPEHLDHFKTFDAVQDAFRIFVENVPFYGFAVMCIDHPVVQALVGKIEDRRIITY 238
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_METEP (UDP-N-acetylmuramate--L-alanine ligase OS=Methylobacterium extorquens (strain PA1) GN=murC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13 Identity = 47/122 (38.52%), Postives = 66/122 (54.10%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 K+TT S++A +L A D T I G + + + G G V+EADE DG FL L VA+VTN+D EH+D F +A+K FRRF+ I G V+C D + L+ I+ + Y Sbjct: 118 KTTTTSLVATLLDAGNLDPTVINGGIINAYGTNARM-GAGDWMVVEADESDGTFLKLPADVAIVTNIDPEHLDHFGSFEAIKDAFRRFIDNIPFYGFAVMCIDHPIVQDLVGHIEDRRIITY 238
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_METC4 (UDP-N-acetylmuramate--L-alanine ligase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=murC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13 Identity = 47/122 (38.52%), Postives = 66/122 (54.10%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 K+TT S++A +L A D T I G + + + G G V+EADE DG FL L VA+VTN+D EH+D F +A+K FRRF+ I G V+C D + L+ I+ + Y Sbjct: 118 KTTTTSLVATLLDAGNLDPTVINGGIINAYGTNARM-GAGDWMVVEADESDGTFLKLPADVAIVTNIDPEHLDHFGSFEAIKDAFRRFIDNIPFYGFAVMCIDHPIVQDLVGHIEDRRIITY 238
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_CHLTE (UDP-N-acetylmuramate--L-alanine ligase OS=Chlorobium tepidum GN=murC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13 Identity = 39/116 (33.62%), Postives = 67/116 (57.76%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT +M+A +L G T ++G V + GS G GK+ V+EADEYD FL L+P++AV+ +L+ EH+D + D ++ F F ++ G ++ C D R ++ ++ + Sbjct: 121 KTTTTAMVATMLLEAGQSPTVMIGG-VSDYLKGSTVVGEGKSMVIEADEYDRAFLKLTPTIAVLNSLESEHMDTYGTMDNLRDCFAEFANKVPFYGRVICCVDWPEIRRIIPRLNR 235
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_CHLAA (UDP-N-acetylmuramate--L-alanine ligase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=murC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13 Identity = 37/113 (32.74%), Postives = 62/113 (54.87%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 642 K+TT ++ A L+ G ++GA VP + + V+EADEYD FL L+P++A++TN++W+H D++ + F F +Q+R L++C D A +L Q Sbjct: 112 KTTTTALTALALRGAGIRCGFLIGADVPALGGSAQWGDPEAPLVIEADEYDRVFLALTPALAIITNVEWDHPDVYPTPSEYTAAFAAFSRQVRDPRRLLVCADDPGALALAGQ 224
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_NOCFA (UDP-N-acetylmuramate--L-alanine ligase OS=Nocardia farcinica GN=murC PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13 Identity = 42/114 (36.84%), Postives = 65/114 (57.02%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 645 K++T SML L+ G D + VG + + + +G G+ FV EADE DG L P VAVVTN++ +H+D F + A +F F ++ GG LV+C D +R+L +++ Sbjct: 134 KTSTTSMLIVALQHCGFDPSFAVGGELNEAGTNA-HHGTGEIFVAEADESDGSLLQYDPDVAVVTNIESDHLDFFGSDAAYTQVFDDFADRLAAGGLLVVCLDDPGSRALAERV 246
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_CAUCR (UDP-N-acetylmuramate--L-alanine ligase OS=Caulobacter crescentus GN=murC PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13 Identity = 46/115 (40.00%), Postives = 67/115 (58.26%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 648 K+TT SM+A +L A G D T + G + + + G G V+EADE DG FL L +VA+VTN+D EH+D + D DAVK F+ F++ I G +C D ++L +I+ Sbjct: 123 KTTTTSMVAALLDAGGLDPTVVNGGIINAYGTNAKV-GEGDWIVVEADESDGSFLKLKSTVAIVTNIDAEHLDHWGDFDAVKKGFQDFIQNIPFYGFAAVCTDHPEVQALTSRIE 236
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_CAUCN (UDP-N-acetylmuramate--L-alanine ligase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=murC PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13 Identity = 46/115 (40.00%), Postives = 67/115 (58.26%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 648 K+TT SM+A +L A G D T + G + + + G G V+EADE DG FL L +VA+VTN+D EH+D + D DAVK F+ F++ I G +C D ++L +I+ Sbjct: 123 KTTTTSMVAALLDAGGLDPTVVNGGIINAYGTNAKV-GEGDWIVVEADESDGSFLKLKSTVAIVTNIDAEHLDHWGDFDAVKKGFQDFIQNIPFYGFAAVCTDHPEVQALTSRIE 236
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_BEII9 (UDP-N-acetylmuramate--L-alanine ligase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=murC PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13 Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 K+TT S++A +L A D T I G + + + G G V+EADE DG FL L +A+VTN+D EH+D F+ DA+K FR F++ I G V+C D + L+ I+ + Y Sbjct: 118 KTTTTSLVATLLDAGKFDPTVINGGIINAYGTNARL-GAGDWMVVEADESDGTFLKLPADIAIVTNIDPEHLDHFKTFDAIKQAFRAFIENIPFYGFAVMCLDHPVVQELVGTIEDRRIITY 238
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_AGRT5 (UDP-N-acetylmuramate--L-alanine ligase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=murC PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13 Identity = 46/122 (37.70%), Postives = 73/122 (59.84%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 K+TT SM+A +L+A D T I G + + + G G+ V+EADE DG FL L VAV+TN+D EH+D + + DAV++ FR+F++ + G V+C D ++L+ +I+ + Y Sbjct: 118 KTTTTSMVATLLEAGNLDPTVINGGIINAYGTNARM-GEGEWMVVEADESDGTFLKLPADVAVITNIDPEHLDHYGNFDAVRAAFRQFVENVPFYGFGVMCLDHPEVQALVGRIEDRKVITY 238 The following BLAST results are available for this feature:
BLAST of DR404627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404627 ID=DR404627; Name=DR404627; organism=Citrus sinensis; type=EST; length=726bpback to top |