DR404627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_RHOP5 (UDP-N-acetylmuramate--L-alanine ligase OS=Rhodopseudomonas palustris (strain BisA53) GN=murC PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13 Identity = 46/122 (37.70%), Postives = 71/122 (58.20%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 669 K+TT SM+A +L A D T I G + + + G G+ V+EADE DG FL L VA+VTN+D EH+D F+ +AV++ FR F++ + G V+C D ++L+ +I+ + Y Sbjct: 118 KTTTTSMVAALLDAGEFDPTVINGGIINAYGTNARL-GAGEWMVVEADESDGTFLKLPADVAIVTNVDPEHLDHFKTFEAVQNAFRDFVENVPFYGFAVMCIDHPVVQALVGKIEDRRIITY 238
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_RENSM (UDP-N-acetylmuramate--L-alanine ligase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=murC PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13 Identity = 45/113 (39.82%), Postives = 62/113 (54.87%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 642 K+TT +M+A +L+ G D + VG VP + +G G FV EADE DG FL P +AVVTN + +H+D + +AV F+ F+ I G LV C D A +L Q Sbjct: 119 KTTTTAMIAVLLREAGLDPSFAVGGTVPALGVNAA-HGAGGIFVAEADESDGSFLNYRPQIAVVTNAEPDHLDHYGTAEAVMEAFQSFIGLIPADGLLVACTDDDGALALAKQ 230
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_MYCSS (UDP-N-acetylmuramate--L-alanine ligase OS=Mycobacterium sp. (strain MCS) GN=murC PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13 Identity = 41/113 (36.28%), Postives = 66/113 (58.41%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 642 K+TT SML L+ G D + VG + + + +G G+ FV EADE DG L +P VAVVTN++ +H+D F +A ++F F++++ GG L+ C D + +L ++ Sbjct: 126 KTTTTSMLIVALQHCGFDPSFAVGGDLGEAGTNA-HHGSGECFVAEADESDGSLLEYTPDVAVVTNIEADHLDFFGSAEAYTAVFDAFVERLTPGGALIACVDDPGSAALAER 237
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_MYCSK (UDP-N-acetylmuramate--L-alanine ligase OS=Mycobacterium sp. (strain KMS) GN=murC PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13 Identity = 41/113 (36.28%), Postives = 66/113 (58.41%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 642 K+TT SML L+ G D + VG + + + +G G+ FV EADE DG L +P VAVVTN++ +H+D F +A ++F F++++ GG L+ C D + +L ++ Sbjct: 126 KTTTTSMLIVALQHCGFDPSFAVGGDLGEAGTNA-HHGSGECFVAEADESDGSLLEYTPDVAVVTNIEADHLDFFGSAEAYTAVFDAFVERLTPGGALIACVDDPGSAALAER 237
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_MYCSJ (UDP-N-acetylmuramate--L-alanine ligase OS=Mycobacterium sp. (strain JLS) GN=murC PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13 Identity = 41/113 (36.28%), Postives = 66/113 (58.41%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 642 K+TT SML L+ G D + VG + + + +G G+ FV EADE DG L +P VAVVTN++ +H+D F +A ++F F++++ GG L+ C D + +L ++ Sbjct: 126 KTTTTSMLIVALQHCGFDPSFAVGGDLGEAGTNA-HHGSGECFVAEADESDGSLLEYTPDVAVVTNIEADHLDFFGSAEAYTAVFDAFVERLTPGGALIACVDDPGSAALAER 237
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_MYCMM (UDP-N-acetylmuramate--L-alanine ligase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=murC PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13 Identity = 40/113 (35.40%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 642 K+TT SM+ L+ G D + VG + + + +G G FV EADE DG L +P VAVVTN++ +H+D + +A +F F++++ GG LV+C D + +L ++ Sbjct: 126 KTTTTSMVIVALQHCGRDPSFAVGGELGEAGTNA-HHGSGDYFVAEADESDGSLLEYTPHVAVVTNIEADHLDFYGSTEAYVGVFDAFVERLAPGGALVVCADDPGSAALAER 237
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_DICT6 (UDP-N-acetylmuramate--L-alanine ligase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=murC PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13 Identity = 41/115 (35.65%), Postives = 69/115 (60.00%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 648 K+TT SM+A VL+ D T IVG + G+ G G+ V E DE DG L L+P + VVTN+D +H+D +E+ + +KS F + ++++ G++++ D + R ++ +IK Sbjct: 115 KTTTTSMIALVLENNKTDPTIIVGGELEDI-GGNAKLGSGEYLVAEGDESDGSILKLNPYILVVTNIDNDHLDYYENIENIKSTFLKVIEKVPEDGYVLLNLDCKNIRDIIGKIK 228
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_SYMTH (UDP-N-acetylmuramate--L-alanine ligase OS=Symbiobacterium thermophilum GN=murC PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.620e-13 Identity = 45/121 (37.19%), Postives = 72/121 (59.50%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDA-VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 663 K+TT+SM+A +L+ G D T ++G + + G+ G G V EADE D FL P VAVVTN++ EH++ +E A ++ FR+FL+Q++ GG +C D RS+ +++ G+ Sbjct: 115 KTTTSSMVACLLEKAGLDPTILLGGDL-EVIGGTGKAGRGDWVVAEADESDRSFLRYHPRVAVVTNVEPEHLEFWEGSFARIQEGFRQFLRQVQPGGLAALCADDPTLRSIGQELRNQPGV 234
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_PROVI (UDP-N-acetylmuramate--L-alanine ligase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=murC PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.620e-13 Identity = 38/116 (32.76%), Postives = 66/116 (56.90%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT +M+A +L G+ T ++G + + GS G GK V+EADEYD FL L+P++AV+ +L+ EH+D + + +K F F ++ G ++ C D R ++ + + Sbjct: 118 KTTTTAMVATMLIEAGESPTVMIGG-ISDYLKGSTVVGSGKYMVIEADEYDRAFLKLTPTIAVLNSLEAEHMDTYGTLEDLKKAFVAFANKVPFYGRVICCADWPEIRGIIGSLNR 232
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_PROA2 (UDP-N-acetylmuramate--L-alanine ligase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=murC PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.620e-13 Identity = 38/103 (36.89%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 612 K+TT +M+A +L G+ T ++G + + GS G GK V+EADEYD FL L+PS+AV+ +L+ EH D + D ++ F F + G ++ C D Sbjct: 118 KTTTTAMIATMLIEAGESPTVMIGG-ISDYLKGSTVVGNGKYMVIEADEYDRAFLKLTPSIAVINSLEAEHADTYATLDELRDAFIDFANSVPFYGKVICCVD 219 The following BLAST results are available for this feature:
BLAST of DR404627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404627 ID=DR404627; Name=DR404627; organism=Citrus sinensis; type=EST; length=726bpback to top |