DR404626

Overview
NameDR404626
Unique NameDR404626
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.977e-44
Identity = 98/204 (48.04%), Postives = 138/204 (67.65%), Query Frame = 2
Query:   26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPE---PNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQ 628
            MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV L+IFS++GKL+E+ + S M K LERY +  Y   +    ++S  E   L    E+ KLKAR E L++++RN +GE+L  L+ KEL+SLE QL  ++K IRS + Q M ++++ LQ K+++L + N  L +++ E  + NT+        C       QPQ
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVL----EHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKE-REKNTVHQEVQLIQCSNNSSILQPQ 199          
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.777e-43
Identity = 93/175 (53.14%), Postives = 128/175 (73.14%), Query Frame = 2
Query:   26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 550
            MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV LI+FS +GKL+E+ + S M + LERY++ ++ A    V        S   E+ KLKAR E LQR+Q++ +GE+L  LN KEL++LE QLD +LK IRS + Q M ++++ LQ +++ L E N  L +++ E
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERLLERYERYSF-AERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKE 174          
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.321e-43
Identity = 93/178 (52.25%), Postives = 131/178 (73.60%), Query Frame = 2
Query:   26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPE---PNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 550
            MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV LI+FS++GKL+E+ + S M + LERY +  Y   +    +VS  E   L    E+ KLKAR E L++++RN +GE+L  L+ KEL+SLE QLD ++K IRS + Q M ++++ LQ K++ L + N +L +++ E
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVL----EHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKE 174          
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 5.717e-42
Identity = 99/192 (51.56%), Postives = 135/192 (70.31%), Query Frame = 2
Query:   26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS--QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL----MEGYQVNTLQLNP 583
            MGRG+VE+KRIENKI RQVTF+KR++GLLKKAYELSVLCDAEV+LIIFS  GKLYEF S+  + +T+ERY +C     + N+   + LE +   +QE  KLK +YE+L R+ RNL+GE+L  ++ KEL++LERQL+ +L   R  +TQ M++ + EL+ KE+ L + N  LK        +G+Q   L LNP
Sbjct:    1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEF-SNVGVGRTIERYYRC-----KDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLKLETEDHDFKGFQ--DLLLNP 184          
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.172e-41
Identity = 91/175 (52.00%), Postives = 126/175 (72.00%), Query Frame = 2
Query:   26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 550
            MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV LI+FS +GKL+E+ + S M + LERY++ ++ A +  V        S   E  KLKAR E LQR+++  +GE+L  LN KEL++LE QL  +LK IRS + Q M ++++ LQ +++ L E N  L +++ E
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYERYSF-AEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKE 174          
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.255e-41
Identity = 96/237 (40.51%), Postives = 146/237 (61.60%), Query Frame = 2
Query:   26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNY----GAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPT---LQIGYQPADPISVVTA 715
            MGRG++E+KRIENK +RQVTF KRRNGLLKKAYEL++LCDAE+ LI+FS+RG+LYEF + +S   T+ERY+K +      AP  +V++ +      QQE  K++ + + LQ + R+L+GE +G + +KEL+SLE +L+  + +IRS + + +   +  +Q +E  L   N  L+ ++ E  +        +AED      PA   G +    LE  P     +  YQPA P+S++ A
Sbjct:    1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNVNSTRSTIERYKKASASTSGSAPVIDVNSHQYF----QQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAEAERAEH-DDQQAAEDDEMAPAPAVGGGSSSGTELEALPATFDTREYYQPAPPVSMLAA 232          
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.408e-40
Identity = 90/194 (46.39%), Postives = 129/194 (66.49%), Query Frame = 2
Query:    5 EERKEKKMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPS 586
            +    KK+GRG++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEV L+IFS RG+LYE+ +++S+  T+ERY+K    A  P  S  EA     QQE  KL+ +   +Q S R+++GE LG LN KEL++LE +L+  + ++RS + + ++  +  +Q +E  L   N  L+ ++ EG ++N  Q   S
Sbjct:    9 DAESSKKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEY-ANNSVRGTIERYKKACSDAVNP-PSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARLNPDQQESS 200          
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.402e-40
Identity = 94/217 (43.32%), Postives = 139/217 (64.06%), Query Frame = 2
Query:    2 GEERKEKKMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS---QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN-TLQLNPSAEDCGYGLKPAQPQGDTF 640
            GE   ++K GRG++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEV LI+FS+RG+LYE+ S++S+  T+ERY+K    A   N +     E+++   QQE  KL+ +  ++Q S R L+GE +G ++ KEL +LE +LD S+ +IRS + + +   +  +Q +E  L   N+ L+ ++ E  + N ++ L P   +    + P Q Q   F
Sbjct:    9 GESSPQRKAGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNNSVKGTIERYKK----AISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLRAKIAENERNNPSMSLMPGGSNYEQIMPPPQTQPQPF 220          
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.192e-39
Identity = 91/208 (43.75%), Postives = 134/208 (64.42%), Query Frame = 2
Query:    2 GEERKEKKMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNT-LQLNPSAEDCGYGLKPAQ 622
            G    ++K+GRG++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEV LI+FS RG+LYE+ +++S+  T+ERY+K    +P  + S  EA     QQE  KL+    ++Q++ RN++GE LG L  ++L+ LE +L+  + +IRS + + +   +  +Q KE  L   N+ L+ ++ E  +    + L P + D  Y L P Q
Sbjct:    9 GNLSPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEY-ANNSVKGTIERYKKACTDSPNTS-SVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIAENERAQQHMNLMPGSSD--YELAPPQ 212          
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.033e-39
Identity = 92/217 (42.40%), Postives = 138/217 (63.59%), Query Frame = 2
Query:    2 GEERKEKKMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS---QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN-TLQLNPSAEDCGYGLKPAQPQGDTF 640
            G+    +K GRG++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEV LI+FS+RG+LYE+ S++S+  T+ERY+K    A   N +     E+++   QQE  KL+ +  ++Q S R L+GE +G ++ KEL +LE +L+ S+ +IRS + + +   +  +Q +E  L   N+ L+ ++ E  + N ++ L P   +    + P Q Q   F
Sbjct:    9 GDSSPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNNSVKGTIERYKK----AISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENERNNPSISLMPGGSNYEQLMPPPQTQSQPF 220          
The following BLAST results are available for this feature:
BLAST of DR404626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
AGL8_SINAL7.977e-4448.04Agamous-like MADS-box protein AGL8 homolog OS=Sina... [more]
AGL8_SOLTU1.777e-4353.14Agamous-like MADS-box protein AGL8 homolog OS=Sola... [more]
AGL8_ARATH2.321e-4352.25Agamous-like MADS-box protein AGL8 OS=Arabidopsis ... [more]
AGL13_ARATH5.717e-4251.56Agamous-like MADS-box protein AGL13 OS=Arabidopsis... [more]
AGL8_SOLCO2.172e-4152.00Agamous-like MADS-box protein AGL8 homolog OS=Sola... [more]
MAD21_ORYSJ8.255e-4140.51MADS-box transcription factor 21 OS=Oryza sativa s... [more]
AGL1_ARATH1.408e-4046.39Agamous-like MADS-box protein AGL1 OS=Arabidopsis ... [more]
AG_BRANA2.402e-4043.32Floral homeotic protein AGAMOUS OS=Brassica napus ... [more]
AG_PANGI1.192e-3943.75Floral homeotic protein AGAMOUS OS=Panax ginseng G... [more]
AG_ARATH2.033e-3942.40Floral homeotic protein AGAMOUS OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionCSAE-PNP1243O23 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone CSAE-PNP1243O23 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404626 ID=DR404626; Name=DR404626; organism=Citrus sinensis; type=EST; length=726bp
GGGGGAAGAAAGAAAGGAGAAGAAAATGGGAAGGGGTAGGGTTGAGTTGA
AGAGGATAGAGAACAAGATCAACAGGCAAGTGACCTTTGCAAAGAGAAGA
AATGGCCTATTGAAGAAAGCTTATGAGCTTTCCGTTCTTTGTGATGCTGA
GGTTACTCTCATCATTTTCTCCAATAGAGGAAAGCTGTACGAGTTTTGCA
GTAGTTCAAGCATGCTCAAAACGCTTGAGAGGTACCAGAAGTGCAACTAT
GGAGCACCAGAACCGAATGTGTCCGCAAGGGAGGCCCTGGAGCTAAGTAG
CCAGCAAGAATATCTGAAGCTTAAAGCACGATATGAAGCCCTACAGAGAT
CCCAAAGGAATCTCCTTGGAGAAGAACTTGGCCCTCTAAACAGCAAAGAG
CTTGAGTCACTTGAAAGGCAGCTTGATATGTCATTGAAGCAGATCAGATC
AACAAGAACTCAGTACATGCTGGATACCCTTACTGAACTGCAACATAAGG
AACAGTTGCTGAGCGAAGCAAATAAGACCCTCAAACAAAGGTTGATGGAG
GGATACCAAGTGAACACACTTCAATTGAATCCTAGTGCAGAAGATTGTGG
TTATGGGCTTAAACCAGCTCAACCTCAGGGCGATACCTTCTTTCACGCCT
TGGAATGTGAACCCACATTGCAAATTGGATACCAGCCTGCGGACCCAATA
TCGGTTGTCACAGCAGGCCCGAGTCT
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