DR404626
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.729e-22 Identity = 69/194 (35.57%), Postives = 112/194 (57.73%), Query Frame = 2 Query: 26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERY--QKCNYGA--PEPNV--------------SAREALELSSQQEYLKLKARYEALQRSQ---RNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 544 M R R E++RIE+ RQVTF+KRR GL KKA EL+VLCDA+V L++FS+ GKL +F +SS+M + +++Y N G +P++ ++ + L Q E+ K + E L + R + GEEL L+ +EL+ +E+ L+ L+++ T+ Q + ++ELQ K L+E N L+ ++ Sbjct: 1 MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQF-ASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQM 193
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 2.258e-22 Identity = 67/183 (36.61%), Postives = 104/183 (56.83%), Query Frame = 2 Query: 26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSS------MLKTLERYQ----KCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 544 MGRG++E+KRIEN NRQVTF+KRR G+LKKA E+ VLCDAEV ++IFS+ GKL ++C+ + + + LE+YQ K + ++SA E ++K + +Q R++ GE+L L KEL ++E L+ +R M+D + E++L + +K L R+ Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSA----------EIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDK----MMDHWRMHKRNEKMLEDEHKMLAFRV 169
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.261e-21 Identity = 68/196 (34.69%), Postives = 113/196 (57.65%), Query Frame = 2 Query: 26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTL-ERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGL 610 M RG++++KRIEN+ NRQVT++KRRNGL KKA+EL+VLCDA V++I+FS+ KL+E+ S ++ K + + YQ + + +V A + + Q+ KL L+ + LGE L L+ +EL LE +++ + K +R + + + + + + K + + K L ++ L+L AED YGL Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQTIS----DVDVWATQYERM--QETKRKLLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQDIQKNL---------IHELELR--AEDPHYGL 179
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.709e-20 Identity = 60/174 (34.48%), Postives = 100/174 (57.47%), Query Frame = 2 Query: 26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSS-SMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 544 MGRG++E+++IENK NRQVTF+KRRNG++KKA EL+VLCDA+V+L++ S+ KL+ + S S+ K + YQK V Q+++ K+ L+R +G +L L EL +L+++++ ++ QIR+ + + + + K + L E + L L Sbjct: 1 MGRGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSPGVSLKKMYDEYQKIE------GVDLWRKQWERMQEQHRKVLELNSLLRREISRRMGGDLEGLTLVELSALQQEMEEAIIQIRNKKYHTIKNQTGTTRKKIKNLEERHTDLVMEL 168
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.789e-19 Identity = 61/170 (35.88%), Postives = 99/170 (58.24%), Query Frame = 2 Query: 104 GLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSS-SMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYL---KLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQ--LNPSAED 595 GLLKKA EL++LCDA++ +IIFS+ GK++EF S SM + ++RYQK +S A +QQ Y ++K + LQ + R+ GE+L L E+ LE+QL++S+ ++RS + Q + L L+ KE +L E N+ L + + + + + Q ++PS D Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQK---------LSGNCAPVYDNQQVYCEITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQNRELYRVIQDHHAASMEQKMVDPSMLD 162
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.987e-19 Identity = 62/198 (31.31%), Postives = 105/198 (53.03%), Query Frame = 2 Query: 26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSS--SMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLK 613 MGRGR E+KRIEN RQ TF KRR+GL KKA EL+VLCDA++ L++FS GKLY F S + S+ + +ERY+ + ++ EL K+ + + L++ R + ++ LE+LE L+ +++++RS + + + + LQ+ + E L ++ + ++ ++ G LK Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYEATTHTKVWADIRQERRAELE------KVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQNIIRGRQEERYGLCDKIAHAQTLKDVECGSTSLSNGLDLK 192
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: MEF2C_PIG (Myocyte-specific enhancer factor 2C OS=Sus scrofa GN=MEF2C PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.200e-15 Identity = 47/131 (35.88%), Postives = 77/131 (58.78%), Query Frame = 2 Query: 26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERY--------------------QKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQR 358 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ LIIF++ KL+++ +S+ M K L +Y +K N G P+ + AL ++++Y K+ ++ + +S + Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQY-ASTDMDKVLLKYTEYNEPHESRTNSDIVEALNKKENKGCESPDPDSSYALTPRTEEKYKKINEEFDNMIKSHK 130
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: MEF2_DROME (Myocyte-specific enhancer factor 2 OS=Drosophila melanogaster GN=Mef2 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.561e-15 Identity = 41/89 (46.07%), Postives = 64/89 (71.91%), Query Frame = 2 Query: 26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALE 292 MGR ++++ RI ++ NRQVTF KR+ G++KKAYELSVLCD E+ LIIFS+ KLY++ +S+ M + L +Y + Y P +++ + +E Sbjct: 1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQY-ASTDMDRVLLKYTE--YNEPHESLTNKNIIE 86
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: MEF2D_XENLA (Myocyte-specific enhancer factor 2D homolog OS=Xenopus laevis GN=mef2d PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.561e-15 Identity = 43/87 (49.43%), Postives = 63/87 (72.41%), Query Frame = 2 Query: 26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREA 286 MGR +++++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ LIIF++ KL+++ +S+ M K L +Y + N EP+ S A Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQY-ASTDMDKVLLKYTEYN----EPHESRTNA 82
BLAST of DR404626 vs. ExPASy Swiss-Prot
Match: MEF2D_RAT (Myocyte-specific enhancer factor 2D OS=Rattus norvegicus GN=Mef2d PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.561e-15 Identity = 43/87 (49.43%), Postives = 63/87 (72.41%), Query Frame = 2 Query: 26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREA 286 MGR +++++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ LIIF++ KL+++ +S+ M K L +Y + N EP+ S A Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQY-ASTDMDKVLLKYTEYN----EPHESRTNA 82 The following BLAST results are available for this feature:
BLAST of DR404626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404626 ID=DR404626; Name=DR404626; organism=Citrus sinensis; type=EST; length=726bpback to top |