DR404625
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_ANATD (UDP-N-acetylmuramate--L-alanine ligase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=murC PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.991e-15 Identity = 41/114 (35.96%), Postives = 71/114 (62.28%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 643 K+TT SM+ Y+LK + T +VGA V Q G+ G + V+EA EY FL +P++ V+ N+D +H+D F+D D++K+ F++F ++I G LV+ D + + +++Q+ Sbjct: 113 KTTTTSMIGYILKKANYNPTVLVGAFVKQL-GGNFVIGSKEYLVVEACEYVDSFLKFNPTIGVILNIDNDHLDYFKDIDSIKNSFKKFAQKIPTSGFLVVNYDDKNVKDIINQL 225
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_ANADF (UDP-N-acetylmuramate--L-alanine ligase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=murC PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.991e-15 Identity = 44/115 (38.26%), Postives = 71/115 (61.74%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 646 K+TT S+ A++L G D TA+VG V F + G G V+EADE DG FL + P++A+VTN+D EH+D ++ E+A++ F F+ ++ G ++C D +SLL +++ Sbjct: 119 KTTTTSLAAHLLAHAGLDPTAVVGGKVNTFGSNAKL-GRGDYMVVEADESDGSFLHIPPTIAIVTNIDPEHLDHWKTEEALRKGFLDFVNRVPFYGRAILCIDHPTVQSLLPEVE 232
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_CORJK (UDP-N-acetylmuramate--L-alanine ligase OS=Corynebacterium jeikeium (strain K411) GN=murC PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15 Identity = 43/114 (37.72%), Postives = 68/114 (59.65%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 643 K++T SM L+A G D + +G + + + G G+ FV EADE DG FL SP +AVVTN++ +H+D F+ E A + +F +F +I GG LV+C D + +L +++ Sbjct: 126 KTSTTSMAVAALQAAGQDPSFAIGGQLNRAGTNA-HNGTGEVFVAEADESDGSFLSYSPEIAVVTNIEPDHLDYFKTESAYREVFEKFAHRIVPGGFLVVCLDDPGSAALAEEL 238
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_DESAD (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=murC PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.436e-15 Identity = 44/116 (37.93%), Postives = 66/116 (56.90%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 649 K+TT S+LA + D T I+G + F + G G+ + EADE DG FL L+P + VVTN+D +H+D + ++A+ FR+F+ I G V+CGD + LL IK+ Sbjct: 116 KTTTTSLLATIFTEAELDPTVIIGGRLNTFGSNARL-GDGQFLIAEADESDGSFLCLAPIITVVTNVDKDHLDFYGGQEAIDESFRKFMNSIPFYGMNVVCGDDPGVQRLLPSIKR 230
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_SYNAS (UDP-N-acetylmuramate--L-alanine ligase OS=Syntrophus aciditrophicus (strain SB) GN=murC PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.794e-15 Identity = 45/118 (38.14%), Postives = 68/118 (57.63%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 655 K+TT SM+A V+ + G D T ++G + + G G+ V EADE DG FL LSPS+AV+TN+D EH+D + + +K F +F + G V+C D +++L IK+ T Sbjct: 133 KTTTTSMIATVMASGGLDPTMVIGGKLGSIGSNARM-GHGEFIVAEADESDGSFLKLSPSLAVITNIDREHLDFYRGIEDIKDAFLQFANIVPFYGSAVLCLDDPHIKTILSDIKRKT 249
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_DESPS (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfotalea psychrophila GN=murC PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.794e-15 Identity = 44/116 (37.93%), Postives = 67/116 (57.76%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 649 K++T S++ +L G D T +VG V F G+ G G V EADE DG FL LSP + VVTN+D EH+D + D + +K F F+ +I G ++C D + ++L Q+++ Sbjct: 117 KTSTTSLIGCLLSQTGFDPTIVVGGKVDSF-GGNAKLGEGDFLVAEADESDGSFLKLSPVLEVVTNIDLEHLDYYTDIEHIKETFLSFIDKIPFYGAAIVCLDDENVAAILPQVQK 231
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_GEOUR (UDP-N-acetylmuramate--L-alanine ligase OS=Geobacter uraniireducens (strain Rf4) GN=murC PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.567e-15 Identity = 43/116 (37.07%), Postives = 69/116 (59.48%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 649 K+TT SM+A +L G D T ++G + + G G+ V EADE DG FL LSP++AVVTN+D +H+D ++D D +K F +F+ ++ G V+C D+ ++ +K+ Sbjct: 116 KTTTTSMVATILAKGGIDPTIVIGGRLNSIGTNARL-GQGQFLVAEADESDGSFLKLSPTIAVVTNIDADHLDFYKDIDEIKDTFVQFINKVPFYGLAVLCLDNGNIADIIPLVKK 230
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_SYNWW (UDP-N-acetylmuramate--L-alanine ligase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=murC PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 47/129 (36.43%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSN 688 K+TT SML VL G + + IVG + Q + + G G FV+EADE D FL L P +A++TN++ +H+D ++ D ++ FR+F++QIR G ++ G RSL+ + + L + G +SN Sbjct: 118 KTTTTSMLYMVLANCGTEPSFIVGGEL-QGSELNAKLGRGDYFVVEADESDASFLDLRPYIALITNVEDDHLDYYKSVDNIRKAFRQFVEQIRPEGFAMLYGGDAFNRSLVKDLTLNKRLLFYGEDLSN 245
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_BRASO (UDP-N-acetylmuramate--L-alanine ligase OS=Bradyrhizobium sp. (strain ORS278) GN=murC PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 48/122 (39.34%), Postives = 72/122 (59.02%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 667 K+TT SM+A +L A G D T I G + + + GGG+ V+EADE DG FL L VA+VTN+D EH+D F+ +AV+ FR F++ + G V+C D ++L+ +I+ + Y Sbjct: 118 KTTTTSMVAALLDAGGLDPTVINGGIINAYGTNARL-GGGEWMVVEADESDGTFLKLPADVAIVTNVDPEHLDHFKTFEAVQDAFRAFVENVPFYGFAVMCIDHPVVQALVGKIEDRRIITY 238
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_ANASK (UDP-N-acetylmuramate--L-alanine ligase OS=Anaeromyxobacter sp. (strain K) GN=murC PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 649 K+TT SM A++L G D TA+VG V F + G G V+EADE DG FL + P++A+VTN+D EH+D ++ DA++ F F+ ++ G ++C D +S+L +++ Sbjct: 119 KTTTTSMAAHLLAHAGLDPTAVVGGKVNAFGSNAKL-GKGDYMVVEADESDGSFLRIPPTIAIVTNIDPEHLDHWKTPDALRRGFVDFVNRVPFYGLAILCIDHPTVQSILPDVEK 233 The following BLAST results are available for this feature:
BLAST of DR404625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404625 ID=DR404625; Name=DR404625; organism=Citrus sinensis; type=EST; length=709bpback to top |