DR404625
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_CLOB6 (UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=murC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 37/113 (32.74%), Postives = 65/113 (57.52%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 640 K+TT SML++V D T +VG ++ +G++ G F+ EA EY FL P + + N+D +H+D ++D D +K+ F +F+K I G+LV G+ + +S++ + Sbjct: 122 KTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGKSDFFITEACEYKSSFLKFFPYIGAILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKE 233
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_SPHWW (UDP-N-acetylmuramate--L-alanine ligase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=murC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 667 K+TT SM+A +L A G D T I G + + + G V+EADE DG FL L ++AVVTN+D EH+D + D VK F F++ + G ++C D ++++ +++ + Y Sbjct: 119 KTTTTSMVAALLDAGGVDPTVINGGIINSYGSNARL-GASDWMVVEADESDGSFLRLDGTIAVVTNIDPEHLDHYGSFDKVKDCFVEFVENVPFYGAALLCIDHPEVQAIIPRVRDRKVVTY 239
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_SALAI (UDP-N-acetylmuramate--L-alanine ligase OS=Salinispora arenicola (strain CNS-205) GN=murC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 38/125 (30.40%), Postives = 70/125 (56.00%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 676 K+TT SM+ VL+ G D + ++G + + G+ +G G+ FV+EADE D FL P V+++TN++ +H++ + D +++ F F + G +V C D +R L + ++ + Y+ G Sbjct: 131 KTTTTSMVTMVLQQAGVDPSFVIGGEISEVGSGA-HHGTGEYFVVEADESDRSFLIYRPFVSIITNIEADHLNTYGDLANLEAAFADFARLTDPDGFVVTCADDAGSRRLAETLRAEGRRVYTYG 254
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_RHOE4 (UDP-N-acetylmuramate--L-alanine ligase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=murC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 41/114 (35.96%), Postives = 62/114 (54.39%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 643 K++T SML L+ G D + VG + + + +G G FV EADE DG L P+V VVTN++ +H+D F +A +F F+ ++R GG L+ C D + L +I Sbjct: 124 KTSTTSMLVVALQHCGFDPSFAVGGELNEAGTNA-HHGSGDVFVAEADESDGSLLQYDPNVIVVTNIEADHLDYFGSVEAYVKVFDDFVDKLRPGGLLIACLDDPGSADLAKRI 236
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_HYDS0 (UDP-N-acetylmuramate--L-alanine ligase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=murC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 38/114 (33.33%), Postives = 64/114 (56.14%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 643 K+TT SM++++ G D T ++G + F ++ G + + EADE DG FL L+ + VVTN+D EH+ ++D + +K F +F+ + G V+ D RS+L +I Sbjct: 117 KTTTTSMISHISHIAGLDPTVLIGGILQTFGSNAVL-GKSELLISEADESDGSFLKLNSVINVVTNIDKEHIGYYKDYEDIKEAFVKFINNVPFYGASVVNIDDTGVRSILSKI 229
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_GRAFK (UDP-N-acetylmuramate--L-alanine ligase OS=Gramella forsetii (strain KT0803) GN=murC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 35/100 (35.00%), Postives = 62/100 (62.00%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVI 601 K+TT ++L ++LK G +TA +G + + ++ G K V+EADE+D FL LSP++A +T++D +H+DI+ D+ ++ FR F ++ G L + Sbjct: 125 KTTTTAILGHLLKETGAKVTAFLGG-ISEDIQSNLIMQGDKVVVVEADEFDRSFLKLSPNLAAITSMDADHLDIYGDKSELEKSFREFAAKVPEDGKLFV 223
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_GRABC (UDP-N-acetylmuramate--L-alanine ligase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=murC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 42/122 (34.43%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 667 K+TT S++A VL+A D T I G + + + G G+ V+EADE DG FL L +AVVTN+D EH+D + +A+++ +++F+ I G V+C D + ++ Q+ + Y Sbjct: 119 KTTTTSLIAAVLEAAQLDPTVINGGIINAYGTNTRL-GAGEWMVVEADESDGSFLRLPAVIAVVTNMDPEHLDHWGTAEAMEAGYQQFVSNIPFYGFAVLCIDHPTVQKMIPQLSDHRIITY 239
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_FLAJ1 (UDP-N-acetylmuramate--L-alanine ligase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=murC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 40/101 (39.60%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNF-VLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVI 601 K+TT+S+L ++L G D+TA VG V + I G GK V+EADE+D FL L P +A VT++D +H+DI+ DA+++ F F ++ L I Sbjct: 122 KTTTSSILGHILHQSGADVTAFVGGIVENYNSNLI--GTGKTVTVVEADEFDRSFLHLHPDIACVTSMDADHLDIYGTSDAIQASFIEFASKVEDKSKLFI 220
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_BARBK (UDP-N-acetylmuramate--L-alanine ligase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=murC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 43/114 (37.72%), Postives = 63/114 (55.26%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 643 K+TT SM+A +L A D I G + + + G G V+EADE DG FL L + VVTN+D EH+D + DAV+ FR+F++ + G V+C D ++L +I Sbjct: 118 KTTTTSMVAALLDAGNFDPMVINGGIINAYGTNARM-GNGNWMVVEADESDGTFLKLPADIVVVTNIDSEHLDHYGSFDAVRESFRQFVENVPFYGFAVMCLDHPEVQTLASRI 230
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_ALKOO (UDP-N-acetylmuramate--L-alanine ligase OS=Alkaliphilus oremlandii (strain OhILAs) GN=murC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 36/115 (31.30%), Postives = 65/115 (56.52%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 646 K+TT S+++ +++ D T +VG + + G+I G ++F+ EA EY FL P + ++ N+D +H+D F+D + +K FR+F+ I G L+ GD + +L I+ Sbjct: 123 KTTTTSLISLIMEYSNLDPTIMVGGELDEI-GGNIKIGNSEHFITEACEYVESFLKFYPFIGIILNIDEDHLDYFKDLNHIKEAFRKFINLIPQEGFLIANGDDANVQEILHSIE 236 The following BLAST results are available for this feature:
BLAST of DR404625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404625 ID=DR404625; Name=DR404625; organism=Citrus sinensis; type=EST; length=709bpback to top |