DR404625
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_SALTO (UDP-N-acetylmuramate--L-alanine ligase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=murC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 37/126 (29.37%), Postives = 69/126 (54.76%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 679 K+TT SM+ VL+ G D + ++G + + G+ +G G FV+EADE D FL P V+++TN++ +H++ + D +++ F F + G ++ C D R L + ++ + Y+ G+ Sbjct: 131 KTTTTSMVTMVLQQAGVDPSFVIGGEISEVGSGA-HHGTGDYFVVEADESDRSFLIYRPFVSIITNIEADHLNTYGDLANLEAAFADFARLTDPDGFIITCADDVGGRRLAETLRAEGRRVYTYGI 255
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_PSEFS (UDP-N-acetylmuramate--L-alanine ligase OS=Pseudomonas fluorescens (strain SBW25) GN=murC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 655 K+TT S++A V A G D T ++G + + G + + EADE D FL L P VAVVTN+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+ T Sbjct: 127 KTTTTSLIASVFAAGGLDPTFVIGGRLNAAGTNAQL-GTSRYLIAEADESDASFLHLQPLVAVVTNIDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPQVKRPT 244
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_DECAR (UDP-N-acetylmuramate--L-alanine ligase OS=Dechloromonas aromatica (strain RCB) GN=murC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 643 K+TT S++ +L G D T ++G + + G G V EADE D FL LSP ++VVTN+D +H++ + D + +KS F FL ++ G V+CGD R +L ++ Sbjct: 116 KTTTTSLVTSILAEGGIDPTFVIGGRL-NAAGANARLGSGDFLVAEADESDASFLFLSPVISVVTNIDADHMETYGHDFERLKSAFVDFLNRLPFYGVAVVCGDDANIRDILPRV 229
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_CYTH3 (UDP-N-acetylmuramate--L-alanine ligase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=murC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 36/102 (35.29%), Postives = 61/102 (59.80%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIF--YGGGKNFVL-EADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLV 598 K+TT+SM A+++ G +A +G + + +G G +V+ EADEYD FL LSP +AV+ N+D +H+DI+ D + F +LK+++ GG ++ Sbjct: 123 KTTTSSMAAHIMHESGMPCSAFLGGITQNYNTNILIGNHGDGAGWVVAEADEYDRSFLQLSPDIAVINNMDPDHLDIYSDVQSFYDSFNEYLKKLKPGGIVI 224
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_BARHE (UDP-N-acetylmuramate--L-alanine ligase OS=Bartonella henselae GN=murC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 44/114 (38.60%), Postives = 63/114 (55.26%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 643 K+TT SM+A +L A D I G + + + G G V+EADE DG FL L +AVVTN+D EH+D + AV+ FR+F++ + G V+C D +SL +I Sbjct: 118 KTTTTSMIAALLDAGSFDPMVINGGIINAYGTNARM-GEGDWMVVEADESDGTFLKLPADIAVVTNIDREHLDHYGSFAAVRDAFRQFVENVPFYGFAVLCIDHPEVQSLASRI 230
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_RICBR (UDP-N-acetylmuramate--L-alanine ligase OS=Rickettsia bellii (strain RML369-C) GN=murC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 40/133 (30.08%), Postives = 70/133 (52.63%), Query Frame = 2 Query: 272 CTRQARSQTRKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 667 C+ K+TT S++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++TN+D EH+D ++D D + + FR F+ + G V C D + R L++ I + + Y Sbjct: 114 CSVAVSGSHGKTTTTSLVACLFEAAGLHPTVINGGIINNRSTNA--YLGSSNYLIAEADESDATFISIPSTIAIITNIDPEHLDYYKDFDTLINAFRSFITNLPFYGFAVCCIDHKIVRELVNNITERKVITY 244
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_RICB8 (UDP-N-acetylmuramate--L-alanine ligase OS=Rickettsia bellii (strain OSU 85-389) GN=murC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 40/133 (30.08%), Postives = 70/133 (52.63%), Query Frame = 2 Query: 272 CTRQARSQTRKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 667 C+ K+TT S++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++TN+D EH+D ++D D + + FR F+ + G V C D + R L++ I + + Y Sbjct: 114 CSVAVSGSHGKTTTTSLVACLFEAAGLHPTVINGGIINNRSTNA--YLGSSNYLIAEADESDATFISIPSTIAIITNIDPEHLDYYKDFDTLINAFRSFITNLPFYGFAVCCIDHKIVRELVNNITERKVITY 244
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_ORITB (UDP-N-acetylmuramate--L-alanine ligase OS=Orientia tsutsugamushi (strain Boryong) GN=murC PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 37/114 (32.46%), Postives = 65/114 (57.02%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 643 K+TT +++A + +A G T I G + + + G G F+ EADE D F+ + ++AV+TN+D EH+D +++ D + S FR+F+ + G V C D ++L+ +I Sbjct: 124 KTTTTALIACIFEACGLHPTVITGGIMNNRATNA-YLGDGDYFIAEADESDATFIKIPATIAVITNIDVEHLDFYKNFDNLISAFRKFIINLPYDGFAVACIDDITVQNLIAKI 236
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_NOVAD (UDP-N-acetylmuramate--L-alanine ligase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=murC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 42/122 (34.43%), Postives = 68/122 (55.74%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 667 K+TT SM+A +L A G D T I G + + + G V+EADE DG FL L ++AVVTN+D EH+D + + VKS F F++ + G ++C D ++++ +++ + Y Sbjct: 119 KTTTTSMVACLLDAGGIDPTVINGGIINSYGSNARL-GDSDWMVVEADESDGSFLRLDGTLAVVTNIDPEHLDHYGSFERVKSAFVEFIENVPFYGAAMLCIDHPEVQAIIPKVRDRRVVTY 239
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_GEOMG (UDP-N-acetylmuramate--L-alanine ligase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=murC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 42/117 (35.90%), Postives = 66/117 (56.41%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 649 K+TT SM+A L G D T ++G + + G G+ V EADE DG FL LSP++AVVTN+D +H+D + + +K F F+ +I G V+C + + +L ++K+ Sbjct: 116 KTTTTSMVATALTHGGIDPTIVIGGKLNTLGTNAKL-GQGQFLVAEADESDGSFLKLSPTIAVVTNIDADHLDFYTGGIEQIKDTFVDFINKIPFYGLAVLCLEDRNIAEILPRVKK 231 The following BLAST results are available for this feature:
BLAST of DR404625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR404625 ID=DR404625; Name=DR404625; organism=Citrus sinensis; type=EST; length=709bpback to top |