DR404625
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_COREF (UDP-N-acetylmuramate--L-alanine ligase OS=Corynebacterium efficiens GN=murC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSL 631 K++T SM L+A G D + +G + + + G G+ FV EADE D L +P +AVVTN++ +H+D F+ +A +F F ++ GG LV+C D A +L Sbjct: 134 KTSTTSMAVVALQAAGMDPSFAIGGQLNKAGTNA-HQGTGEAFVAEADESDASLLRYTPEIAVVTNIEPDHLDFFKTPEAYFQVFEDFADRLTPGGTLVVCLDDPGAAAL 242
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_CAUSK (UDP-N-acetylmuramate--L-alanine ligase OS=Caulobacter sp. (strain K31) GN=murC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 44/115 (38.26%), Postives = 65/115 (56.52%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 646 K+TT SM+A +L A D T + G + + + G G V+EADE DG FL L +VA+VTN+D EH+D + DAVK F+ F++ I G +C D ++L +I+ Sbjct: 123 KTTTTSMVAALLDAGALDPTVVNGGIINAYGTNAKV-GEGDWIVVEADESDGSFLKLKSTVAIVTNIDAEHLDHWGTFDAVKKGFQDFIENIPFYGFAAVCTDHPEVQALTARIE 236
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_BORPE (UDP-N-acetylmuramate--L-alanine ligase OS=Bordetella pertussis GN=murC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 634 K+TT S++A VL A G D T ++G + + G G+ V+EADE D FL L P +A+VTN+D +H+D + D +KS F F +++ G ++C D R ++ Sbjct: 116 KTTTTSLVASVLAAGGLDPTFVIGGRLTS-AGANARLGQGEYIVVEADESDASFLNLLPVMAIVTNIDADHMDTYGHDVARLKSAFIEFTQRLPFYGSAILCADDANVREIM 226
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_BORPA (UDP-N-acetylmuramate--L-alanine ligase OS=Bordetella parapertussis GN=murC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 634 K+TT S++A VL A G D T ++G + + G G+ V+EADE D FL L P +A+VTN+D +H+D + D +KS F F +++ G ++C D R ++ Sbjct: 116 KTTTTSLVASVLAAGGLDPTFVIGGRLTS-AGANARLGQGEYIVVEADESDASFLNLLPVMAIVTNIDADHMDTYGHDVARLKSAFIEFTQRLPFYGSAILCADDANVREIM 226
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_BORBR (UDP-N-acetylmuramate--L-alanine ligase OS=Bordetella bronchiseptica GN=murC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 634 K+TT S++A VL A G D T ++G + + G G+ V+EADE D FL L P +A+VTN+D +H+D + D +KS F F +++ G ++C D R ++ Sbjct: 116 KTTTTSLVASVLAAGGLDPTFVIGGRLTS-AGANARLGQGEYIVVEADESDASFLNLLPVMAIVTNIDADHMDTYGHDVARLKSAFIEFTQRLPFYGSAILCADDANVREIM 226
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_BARQU (UDP-N-acetylmuramate--L-alanine ligase OS=Bartonella quintana GN=murC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 44/114 (38.60%), Postives = 63/114 (55.26%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 643 K+TT SM+A +L A D I G + + + G G V+EADE DG FL L +AVVTN+D EH+D + AV+ FR+F++ + G V+C D +SL +I Sbjct: 118 KTTTTSMIAALLDAGRFDPMVINGGIINAYGTNARM-GSGDWMVVEADESDGTFLKLPADIAVVTNIDREHLDHYGSFCAVREAFRQFVENVPFYGFAVLCLDHPEVQSLASRI 230
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_PSEF5 (UDP-N-acetylmuramate--L-alanine ligase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=murC PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 44/119 (36.97%), Postives = 64/119 (53.78%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 655 K+TT S+LA V A G D T ++G + + G + + EADE D FL L P VAVVTN+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+ T Sbjct: 127 KTTTTSLLASVFAAGGLDPTFVIGGRLNAAGTNAQL-GTSRYLIAEADESDASFLHLQPLVAVVTNIDADHMATYDGDFNKLKKTFVDFLHNLPFYGLAVMCLDDPVVREILPQVKRPT 244
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_LEPCP (UDP-N-acetylmuramate--L-alanine ligase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=murC PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 41/117 (35.04%), Postives = 63/117 (53.85%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 649 K+TT S++ VL G D T ++G + S G G V+EADE D FL L P ++V+TN+D +H+D + D +K F FL ++ G ++CGD RS++ I + Sbjct: 116 KTTTTSLVTSVLAEAGLDPTFVIGGKLNSAGANSAL-GKGDYIVVEADESDASFLNLLPVLSVITNIDADHMDTYGHDFARLKQAFVEFLHKMPFYGAAILCGDDPGVRSIIPMISR 231
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_LAWIP (UDP-N-acetylmuramate--L-alanine ligase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=murC PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 37/116 (31.90%), Postives = 62/116 (53.45%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 649 K+TT S+ A V G D T ++G + + + G G+ + EADE DG FL L P + VVTN+D +H+D + + ++ F F+ + G V+CGD + +L ++ + Sbjct: 116 KTTTTSLTATVFDTAGFDPTVVIGGVLNAY-GANARLGQGQYLIAEADESDGSFLLLLPIINVVTNIDLDHLDYYRSFEEIEHAFVTFMNNVPFYGMNVVCGDDPGVQRVLPRVNR 230
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_AZOVD (UDP-N-acetylmuramate--L-alanine ligase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=murC PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 655 K+TT S++A V A G D T ++G + + G + + EADE D FL L P VAVVTN+D +H+D +E D +K F FL + G V+C D R +L + + T Sbjct: 129 KTTTTSLIASVFAAGGLDPTFVIGGRLNAAGTNAQL-GSSRYLIAEADESDASFLHLQPMVAVVTNIDADHMDTYEGDFSRLKKTFVDFLHNLPFYGLAVLCVDDPVVREILPLVARPT 246 The following BLAST results are available for this feature:
BLAST of DR404625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404625 ID=DR404625; Name=DR404625; organism=Citrus sinensis; type=EST; length=709bpback to top |