DR404625
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_NITEC (UDP-N-acetylmuramate--L-alanine ligase OS=Nitrosomonas eutropha (strain C91) GN=murC PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.076e-11 Identity = 38/117 (32.48%), Postives = 63/117 (53.85%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 649 K+TT S++A +L G D T ++G + D G G+ V+EADE D FL L P + VVTN+D +H+ +E D + +K F F++ + G V+C D +++ + + Sbjct: 116 KTTTTSLVASILAEAGQDPTFVIGGRLKTV-DSHARLGKGEFIVVEADESDASFLYLQPVLTVVTNIDADHMSTYEHDFNRLKQTFVEFIEHLPFYGMAVLCADDPHVSAIIPMVSK 231
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_MARMM (UDP-N-acetylmuramate--L-alanine ligase OS=Maricaulis maris (strain MCS10) GN=murC PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.076e-11 Identity = 40/122 (32.79%), Postives = 67/122 (54.92%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 667 K+TT S++A ++ A G D T I G + + + G G +EADE DG FL L +VA+VTN+D EH++ + D ++ F +F++ + G V+C D +SL +++ + Y Sbjct: 121 KTTTTSLVAVLMDAAGVDPTVINGGIISAYGSNAKV-GLGDWMAVEADESDGSFLKLRSTVAIVTNIDPEHMEHYGTFDVLRQAFFQFVENLPFYGFAVLCTDHPEVQSLASRVEDRRVITY 241
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_SULSY (UDP-N-acetylmuramate--L-alanine ligase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=murC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.629e-11 Identity = 36/116 (31.03%), Postives = 63/116 (54.31%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 649 K+TT SM+ VL G D T ++G + + + G G+ V E+DE DG FL L+P++ + N+D EH+ ++D + +K F F ++ G + D + +S+L I++ Sbjct: 117 KTTTTSMVGTVLGKTGFDPTVVIGGKLEAYGSNAKL-GRGEFLVTESDESDGSFLKLTPTIVSINNIDLEHIGFYKDLEDIKKAFVAFANKVPFYGAAAVNIDDENVKSILPYIER 231
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_RHOSR (UDP-N-acetylmuramate--L-alanine ligase OS=Rhodococcus sp. (strain RHA1) GN=murC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.629e-11 Identity = 40/114 (35.09%), Postives = 60/114 (52.63%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 643 K++T SML L+ G D + VG + + + +G G FV EADE DG L P V VVTN++ +H+D F +A +F F ++ GG LV C D + +L ++ Sbjct: 124 KTSTTSMLVVALQHCGFDPSFAVGGELNEAGTNA-HHGSGDVFVAEADESDGSLLQYEPDVVVVTNVEADHLDYFGSTEAYIQVFDDFAARLSPGGLLVACLDDPGSAALAQRV 236
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_RHOOB (UDP-N-acetylmuramate--L-alanine ligase OS=Rhodococcus opacus (strain B4) GN=murC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.629e-11 Identity = 40/114 (35.09%), Postives = 61/114 (53.51%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 643 K++T SML L+ G D + VG + + + +G G FV EADE DG L P+V VVTN++ +H+D F +A +F F ++ GG LV C D + +L ++ Sbjct: 124 KTSTTSMLVVALQHCGFDPSFAVGGELNEAGTNA-HHGSGDVFVAEADESDGSLLQYDPNVVVVTNVEADHLDYFGSPEAYIQVFDDFAARLSHGGLLVACLDDPGSAALAQRV 236
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_PSEU5 (UDP-N-acetylmuramate--L-alanine ligase OS=Pseudomonas stutzeri (strain A1501) GN=murC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.629e-11 Identity = 43/119 (36.13%), Postives = 61/119 (51.26%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 655 K+TT S+LA V A G D T ++G + + G + + EADE D FL L P VAVVTN+D +H+ + D +K F FL + G V+C D R ++ QI + T Sbjct: 129 KTTTTSLLASVFAAGGLDPTFVIGGRLTAAGTNAQL-GSSRYLIAEADESDASFLHLQPMVAVVTNIDADHMSTYGGDFGKLKKTFVEFLHNLPFYGLAVLCVDDPVVREIIPQIGRPT 246
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_PSEU2 (UDP-N-acetylmuramate--L-alanine ligase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=murC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.629e-11 Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 655 K+TT S++A V A G D T ++G + + G + + EADE D FL L P VAVVTN+D +H+ +E D + +K F FL + G V+C D R +L +K+ T Sbjct: 127 KTTTTSLIASVFAAGGLDPTFVIGGRLNAAGTNAQL-GTSRYLIAEADESDASFLHLQPLVAVVTNIDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCIDDPVVREILPLVKRPT 244
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_PSEMY (UDP-N-acetylmuramate--L-alanine ligase OS=Pseudomonas mendocina (strain ymp) GN=murC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.629e-11 Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 655 K+TT S+LA V A G D T ++G + + G + + EADE D FL L P V+VVTN+D +H+ + D + +K F FL + G V+C D R LL Q+ + T Sbjct: 129 KTTTTSLLASVFAAGGLDPTFVIGGRLNAAGTNAQL-GSSRFLIAEADESDASFLHLQPMVSVVTNIDADHMSTYGGDFNRLKKTFIEFLHNLPFYGLAVLCVDDPVVRELLPQVGRPT 246
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_PSEAE (UDP-N-acetylmuramate--L-alanine ligase OS=Pseudomonas aeruginosa GN=murC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.629e-11 Identity = 44/119 (36.97%), Postives = 62/119 (52.10%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 655 K+TT S++A V A G D T ++G + + G + V EADE D FL L P VAVVTN+D +H+ + D + +K F FL + G V+C D R +L QI + T Sbjct: 126 KTTTTSLIASVFAAGGLDPTFVIGGRLNAAGTNAQL-GASRYLVAEADESDASFLHLQPMVAVVTNIDADHMATYGGDFNKLKKTFVEFLHNLPFYGLAVMCVDDPVVREILPQIARPT 243
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_PSEAB (UDP-N-acetylmuramate--L-alanine ligase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=murC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.629e-11 Identity = 44/119 (36.97%), Postives = 62/119 (52.10%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 655 K+TT S++A V A G D T ++G + + G + V EADE D FL L P VAVVTN+D +H+ + D + +K F FL + G V+C D R +L QI + T Sbjct: 126 KTTTTSLIASVFAAGGLDPTFVIGGRLNAAGTNAQL-GASRYLVAEADESDASFLHLQPMVAVVTNIDADHMATYGGDFNKLKKTFVEFLHNLPFYGLAVMCVDDPVVREILPQIARPT 243 The following BLAST results are available for this feature:
BLAST of DR404625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404625 ID=DR404625; Name=DR404625; organism=Citrus sinensis; type=EST; length=709bpback to top |