DR404625
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_NITOC (UDP-N-acetylmuramate--L-alanine ligase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=murC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11 Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 643 K+TT S++A +L D T ++G V S G G+ V EADE D FL L P +AV+TN+D +H+D + D A+K+ F FL + G V+C D R LL I Sbjct: 127 KTTTTSLIAGILGEANLDPTFVIGGQVNSIGANSRL-GKGEYLVAEADESDASFLLLQPLLAVITNVDADHMDAYGGDFTALKAAFLEFLHHLPFYGLAVVCLDDPVLRELLPGI 240
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_HYPNA (UDP-N-acetylmuramate--L-alanine ligase OS=Hyphomonas neptunium (strain ATCC 15444) GN=murC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11 Identity = 45/142 (31.69%), Postives = 75/142 (52.82%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNF-VLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVS-----NQSSDLWG 709 K+TT S++A +L G D T I G + + GS + G ++ V+E+DE DG F L P+ A+VTN+D EH+D + D ++ F F++ + G V+C D ++L ++ + Y + + N S+DL G Sbjct: 120 KTTTTSLVACLLDGAGIDPTVINGGIIHAY--GSNYKAGESDWMVVESDESDGTFAKLHPTCAIVTNIDPEHMDHYGTMDKLREAFDTFVENLPFYGFAVLCTDHPEVQALAARVTDRRRITYGFNLQADVRAVNLSTDLKG 259
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_DIAST (UDP-N-acetylmuramate--L-alanine ligase OS=Diaphorobacter sp. (strain TPSY) GN=murC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11 Identity = 41/112 (36.61%), Postives = 63/112 (56.25%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 634 K+TT S++A VL G D T ++G + + G G+ V+EADE DG FL L P +AVVTN+D +H++ + D +K F FL ++ G ++C D+ R +L Sbjct: 116 KTTTTSLVASVLGEAGLDPTFVIGGRLNSAGTNAKL-GQGEYIVVEADESDGSFLNLLPVMAVVTNIDADHMETYGHDFGRLKQAFVDFLHRMPFYGTAILCIDNPAVRDIL 226
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_CLOPH (UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=murC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11 Identity = 35/114 (30.70%), Postives = 66/114 (57.89%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 643 K+TT SM++ ++ D T VG + +G+I G +NF++E+ EY FL +P+ A++ N++ EH+D F+D + +++ F F K++ G+LV+ G L++ + Sbjct: 122 KTTTTSMVSLMMLEGNFDPTISVGGILDNI-EGNIRIGHSENFIVESCEYKNSFLSFNPAHAIILNIEAEHLDFFKDIEDIRTSFHTFAKKLPDYGNLVVWGGIDRYEELIEDL 234
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_BORPD (UDP-N-acetylmuramate--L-alanine ligase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=murC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11 Identity = 40/112 (35.71%), Postives = 62/112 (55.36%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 634 K+TT S++A VL A D T ++G + + G G+ V+EADE D FL L P +A+VTN+D +H+D + D +KS F F +++ G V+C D R ++ Sbjct: 116 KTTTTSLVASVLAAGDLDPTFVIGGRLTS-AGANARLGQGEYIVVEADESDASFLNLLPVMAIVTNIDADHMDTYGHDVARLKSAFIEFTQRLPFYGSAVLCADDANVREIM 226
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_BLOFL (UDP-N-acetylmuramate--L-alanine ligase OS=Blochmannia floridanus GN=murC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11 Identity = 39/117 (33.33%), Postives = 68/117 (58.12%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 649 K+TT SML + G D T + G + + S G G +F+ E+DE D FL L P VAV+TN+D +H++ + ++ + ++ +F +FL ++ + G+ V+C D R +L +I + Sbjct: 131 KTTTVSMLTNIYVEAGLDPTFVNGGII-RSQGVSARLGYGNDFIAESDESDKSFLRLCPVVAVITNIDTDHMNTYHQNFEYLQEVFIKFLDKLPMYGYAVVCIDDPVVRKILPRINR 246
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_ACISJ (UDP-N-acetylmuramate--L-alanine ligase OS=Acidovorax sp. (strain JS42) GN=murC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11 Identity = 41/112 (36.61%), Postives = 63/112 (56.25%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 634 K+TT S++A VL G D T ++G + + G G+ V+EADE DG FL L P +AVVTN+D +H++ + D +K F FL ++ G ++C D+ R +L Sbjct: 116 KTTTTSLVASVLGEAGLDPTFVIGGRLNSAGTNAKL-GQGEYIVVEADESDGSFLNLLPVMAVVTNIDADHMETYGHDFGRLKQAFVDFLHRMPFYGTAILCIDNPAVRDIL 226 The following BLAST results are available for this feature:
BLAST of DR404625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404625 ID=DR404625; Name=DR404625; organism=Citrus sinensis; type=EST; length=709bpback to top |