DR404625
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_CALS8 (UDP-N-acetylmuramate--L-alanine ligase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=murC PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.905e-14 Identity = 43/117 (36.75%), Postives = 68/117 (58.12%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 652 K+TT SM+ Y+LK + T +VGA V Q G+ G + V+EA EY FL +PS+ V+ N+D +H+D F+D +++K FR+F +I G +V D + S+ +KQ+ Sbjct: 113 KTTTTSMIGYILKKALLNPTVLVGAFVKQL-GGNFCIGSSEYLVVEACEYVDSFLNFNPSIGVILNIDNDHLDYFKDIESIKDSFRKFALKIPQNGFIVANLDDENVYSVASYLKQN 228
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_SORC5 (UDP-N-acetylmuramate--L-alanine ligase OS=Sorangium cellulosum (strain So ce56) GN=murC PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 45/114 (39.47%), Postives = 65/114 (57.02%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 643 K+TT S++A VL+A G D T +VG + + G G V EADE DG FL L+P++AVVTN+D EH+D + + +K F F ++ G V+C D + LL +I Sbjct: 117 KTTTTSLVATVLRAAGLDPTVVVGGKMAALGTNARL-GAGDLLVAEADESDGSFLRLTPTIAVVTNIDPEHLDHYGTHERIKDAFVEFAARVPFYGLAVLCLDHPHVQDLLPRI 229
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_RHIME (UDP-N-acetylmuramate--L-alanine ligase OS=Rhizobium meliloti GN=murC PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 47/122 (38.52%), Postives = 72/122 (59.02%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 667 K+TT SM+A +L A G D T I G + + + G G+ V+EADE DG FL L +AVVTN+D EH+D + DAV++ FR+F++ + G V+C D +S++ +I+ + Y Sbjct: 118 KTTTTSMVAALLDAGGLDPTVINGGIINAYGTNARM-GAGEWMVVEADESDGTFLKLPADIAVVTNIDPEHLDHYGSFDAVRAAFRQFVENVPFYGFGVLCLDHPEVQSMVGKIEDRKVVTY 238
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_MYCPA (UDP-N-acetylmuramate--L-alanine ligase OS=Mycobacterium paratuberculosis GN=murC PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSL 631 K+TT SML L+ G D + VG + + + +G G FV EADE DG L +P VAVVTN++ +H+D + DA ++F F++++ GG LV+C D A +L Sbjct: 126 KTTTTSMLIVALQHCGRDPSFAVGGEMGEAGTNA-HHGSGDCFVAEADESDGSLLEYTPDVAVVTNIETDHLDFYGSADAYVAVFDAFVERLAPGGALVVCVDDPGAAAL 234
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_MYCA1 (UDP-N-acetylmuramate--L-alanine ligase OS=Mycobacterium avium (strain 104) GN=murC PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSL 631 K+TT SML L+ G D + VG + + + +G G FV EADE DG L +P VAVVTN++ +H+D + DA ++F F++++ GG LV+C D A +L Sbjct: 126 KTTTTSMLIVALQHCGRDPSFAVGGEMGEAGTNA-HHGSGDCFVAEADESDGSLLEYTPDVAVVTNIETDHLDFYGSADAYVAVFDAFVERLAPGGALVVCVDDPGAAAL 234
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_GEOSM (UDP-N-acetylmuramate--L-alanine ligase OS=Geobacter sp. (strain M21) GN=murC PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 43/116 (37.07%), Postives = 67/116 (57.76%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 649 K+TT SM+A +L G D T ++G + + G G+ V EADE DG FL LSP++AVVTN+D +H+D + + +K F F+ +I G V+C D+ +L ++K+ Sbjct: 116 KTTTTSMVATILSKGGIDPTIVIGGRLNSLGTNARL-GQGQFLVAEADESDGSFLLLSPTIAVVTNIDADHLDFYSGIEEIKDTFVEFINKIPFYGLAVLCLDNGNVADVLPRVKK 230
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_CARHZ (UDP-N-acetylmuramate--L-alanine ligase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=murC PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 44/116 (37.93%), Postives = 65/116 (56.03%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 649 K+TT+SM+AYVL+ G D VG + + G G+ V EADE DG FL L P AV+TN++ +H+D ++ + +K F++F IR G V C D+ R +L K+ Sbjct: 127 KTTTSSMIAYVLEKEGFDPVIAVGGEIVDLGYNAKA-GQGEYMVAEADESDGSFLKLLPYAAVITNIEADHLDYYQSFEEIKKAFKKFADNIRPEGFGVFCWDNLQVREMLKGYKK 241
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_ARTAT (UDP-N-acetylmuramate--L-alanine ligase OS=Arthrobacter aurescens (strain TC1) GN=murC PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 46/113 (40.71%), Postives = 65/113 (57.52%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 640 KSTT SM+A +LK G D + +GA+VP + +G FV EADE DG FL P +AVVTN++ +H+D + +AV + F F + G L+ C D AR+L D+ Sbjct: 122 KSTTTSMVAVLLKEAGLDPSFAIGANVPALGVNAA-HGSSDIFVAEADESDGSFLNYRPLIAVVTNVEADHLDHYGTPEAVFASFDDFAALLPAQGVLLACSDDAGARALADR 233
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_SYNFM (UDP-N-acetylmuramate--L-alanine ligase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=murC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 42/116 (36.21%), Postives = 69/116 (59.48%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 649 K+TT SM++ VL G D T ++G + + + G G V EADE DG FL L P++AVVTN+D EH+D + D ++ F +F+ +I G V+C + + +S+L ++++ Sbjct: 117 KTTTTSMVSTVLARGGLDPTVVIGGKLNAWGTNAKL-GNGDFMVAEADESDGTFLLLPPTIAVVTNIDLEHLDFYRDLAHIQETFLQFINKIPFYGQAVLCLEDENIQSILPRVEK 231
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_RHIL3 (UDP-N-acetylmuramate--L-alanine ligase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=murC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 47/122 (38.52%), Postives = 74/122 (60.66%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 667 K+TT S++A +L+A G D T I G + + + G G+ V+EADE DG FL L VAV+TN+D EH+D + + DAV++ FR+F++ + G V+C D +SL+ +I+ + Y Sbjct: 118 KTTTTSLVATLLEAGGLDPTVINGGIINAYGTNARM-GEGEWMVVEADESDGTFLKLPADVAVITNIDPEHLDHYGNFDAVRAAFRQFVENVPFYGFGVMCLDHPEVQSLVGRIEDRKIITY 238 The following BLAST results are available for this feature:
BLAST of DR404625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404625 ID=DR404625; Name=DR404625; organism=Citrus sinensis; type=EST; length=709bpback to top |