DR404625
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_CHLPB (UDP-N-acetylmuramate--L-alanine ligase OS=Chlorobium phaeobacteroides (strain BS1) GN=murC PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 40/116 (34.48%), Postives = 66/116 (56.90%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 649 K+TT +M+A +L G+ T ++G + GS G GK V+EADEYD FL L+PS+AV+ +L+ EH D + D +A++ F F ++ G + C D R ++ ++ + Sbjct: 118 KTTTTAMIATMLIGAGESPTVMIGG-ISDDLKGSTMVGSGKYMVIEADEYDRAFLKLTPSLAVINSLEMEHTDTYADIEALRDAFVAFANKVPFYGRVFCCVDWPEVRKIIPRMNR 232
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_ARTS2 (UDP-N-acetylmuramate--L-alanine ligase OS=Arthrobacter sp. (strain FB24) GN=murC PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 646 KSTT SM+ +L+ G D T +GA+VP + G FV EADE DG FL P +AVVTN++ +H+D + +AV F F + + G LV C D AR+L ++ + Sbjct: 127 KSTTTSMVTVLLQGAGLDPTFAIGANVPSLGVNAAS-GTSDIFVAEADESDGSFLNYRPHIAVVTNVEPDHLDYYGTAEAVYESFDSFTELLPADGVLVACADDPGARALAERTR 240
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_RHOP2 (UDP-N-acetylmuramate--L-alanine ligase OS=Rhodopseudomonas palustris (strain HaA2) GN=murC PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 667 K+TT SM+A +L A D T I G + + + G G V+EADE DG FL L VA+VTN+D EH+D F+ DAV+ FR F++ + G V+C D ++L+ +I+ + Y Sbjct: 118 KTTTTSMVAALLDAGDFDPTVINGGIINAYGTNARL-GAGDWMVVEADESDGTFLKLPADVAIVTNVDPEHLDHFKTFDAVQDAFRNFVENVPFYGFAVMCIDHPVVQALVGKIEDRRIITY 238
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_NITWN (UDP-N-acetylmuramate--L-alanine ligase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=murC PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 46/122 (37.70%), Postives = 70/122 (57.38%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 667 K+TT SM+A +L A D T I G + + + G G+ V+EADE DG FL L VA+VTN+D EH+D F+ DAV+ FR F++ + G V+C D ++++ +I+ + Y Sbjct: 118 KTTTTSMVATLLDAGDFDPTVINGGIINAYGTNARL-GAGEWMVVEADESDGTFLKLPTDVAIVTNVDAEHLDHFKTFDAVQDAFRSFVENVPFYGFAVMCIDHPVVQAMVGRIEDRRIITY 238
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_METSB (UDP-N-acetylmuramate--L-alanine ligase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=murC PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 46/122 (37.70%), Postives = 68/122 (55.74%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 667 K+TT S++A +L+A G D T I G + + S G G V+EADE DG FL L VA++TN+D EH+D F + ++ FR F++ I G V+C D + L+ QI+ + Y Sbjct: 118 KTTTTSLVATLLEAGGFDPTVINGGIINAYGTNSRL-GAGDWMVVEADESDGTFLKLPADVAIITNIDPEHLDHFGTFENIRKAFRSFVENIPFYGFAVMCLDHPTVQELVGQIEDRRVITY 238
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_SACEN (UDP-N-acetylmuramate--L-alanine ligase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=murC PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13 Identity = 44/113 (38.94%), Postives = 65/113 (57.52%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 640 K++T SML L+ D + +G + + + +G G FV EADE DG FL +PSVAVVTN++ +H+D +A +F+RF+++I GG L+ C D A L DQ Sbjct: 137 KTSTTSMLTVALQHCRLDPSFAIGGDLNE-SGANAHHGDGGVFVAEADESDGSFLVFAPSVAVVTNVEPDHLDHHGTAEAYTEVFQRFVERIEPGGVLIACADDAGAALLADQ 248
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_RHOPB (UDP-N-acetylmuramate--L-alanine ligase OS=Rhodopseudomonas palustris (strain BisB18) GN=murC PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13 Identity = 47/122 (38.52%), Postives = 70/122 (57.38%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 667 K+TT SM+A +L A D T I G + + + G G+ V+EADE DG FL L VA+VTN+D EH+D F+ DAV+ FR F++ + G V+C D ++L+ +I+ + Y Sbjct: 118 KTTTTSMVAALLDAGEFDPTVINGGIINAYGTNARL-GAGEWMVVEADESDGTFLKLPADVAIVTNVDPEHLDHFKTFDAVQEAFRDFVENVPFYGFAVMCIDHPVVQALVGKIEDRRIITY 238
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_RHILO (UDP-N-acetylmuramate--L-alanine ligase OS=Rhizobium loti GN=murC PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13 Identity = 46/122 (37.70%), Postives = 71/122 (58.20%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 667 K+TT SM+A +L+A G D T I G + + + G G+ V+EADE DG FL L +AVVTN+D EH+D + D V+ FR+F++ + G V+C D ++L+ +I+ + Y Sbjct: 118 KTTTTSMVATLLEAGGLDPTVINGGIINAYGTNARM-GDGEWMVVEADESDGTFLKLPADIAVVTNIDPEHLDHYGSFDKVREAFRQFVENVPFYGFGVMCTDHPEVQALVGRIEDRRVITY 238
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_METNO (UDP-N-acetylmuramate--L-alanine ligase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=murC PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13 Identity = 46/115 (40.00%), Postives = 65/115 (56.52%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 646 K+TT S++A +L A G D T I G + + + G G V+EADE DG FL L +A+VTN+D EH+D F DA+K FR F+ I G V+C D + L+ +I+ Sbjct: 118 KTTTTSLVATLLDAGGLDPTVINGGIINAYGTNARM-GEGDWMVVEADESDGTFLKLPADIAIVTNIDPEHLDHFGSFDAIKDAFRAFIDNIPFYGFAVMCIDHPTVQDLVGRIE 231
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_UNCTG (UDP-N-acetylmuramate--L-alanine ligase OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=murC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13 Identity = 41/114 (35.96%), Postives = 64/114 (56.14%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 643 K+TT S+ + VL G D T ++G + + G G V+EADE DG FL LSP + VVTN+D +H+D ++ + +K F + + I G +IC D++ R ++ QI Sbjct: 116 KTTTTSLTSLVLHNGGLDPTIVIGGRLKNLKTNAKL-GRGDYIVVEADESDGSFLRLSPIITVVTNIDNDHLDYYDSMENLKEAFVKHINCIPFYGTAIICSDNEVVRKIIPQI 228 The following BLAST results are available for this feature:
BLAST of DR404625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404625 ID=DR404625; Name=DR404625; organism=Citrus sinensis; type=EST; length=709bpback to top |