DR404625
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_PELPD (UDP-N-acetylmuramate--L-alanine ligase OS=Pelobacter propionicus (strain DSM 2379) GN=murC PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.423e-13 Identity = 43/117 (36.75%), Postives = 68/117 (58.12%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 649 K+TT SM A +L G D T ++G + + G GK + EADE DG FL LSP++AVVTN+D +H+D + + +K F +F+ ++ G V+C D R++L ++K+ Sbjct: 116 KTTTTSMAASILGHAGIDPTIVIGGKLNAIGTNAQL-GQGKFLLAEADESDGSFLVLSPTIAVVTNIDADHLDHYSGGIEEIKDTFVKFINKVPFYGMAVLCLDDPNIRAILPRVKK 231
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_DESRM (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfotomaculum reducens (strain MI-1) GN=murC PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.423e-13 Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSL 631 K+TT SM A +L+ D T I+G + G+ G G+ V EADE DG FL L P++AVVTN++ +H+D + + + FR+FL ++ G VIC D + + Sbjct: 120 KTTTTSMTALILEENSFDPTIIIGGDLSNI-GGNAKLGQGEYMVAEADESDGSFLLLDPNIAVVTNIEDDHLDYYGTRENIAKAFRQFLAKLSAEGLAVICLDDPVLKEI 228
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_BORBU (UDP-N-acetylmuramate--L-alanine ligase OS=Borrelia burgdorferi GN=murC PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.423e-13 Identity = 41/131 (31.30%), Postives = 70/131 (53.44%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI--KQDTGLKYSGGVVSN 688 K+TT + L + +G + IVG+ V F D S G F++E EY FL SP++ ++TN+D+EHVD F++ +A++ F +++ ++ G L+I D + QI K + Y G +S+ Sbjct: 125 KTTTTAFLGVLFNKLGLNPNVIVGSSVKDFKDNSAIAGISNIFIVETCEYKKHFLNFSPNMLILTNVDYEHVDFFKNYEALEEAFLQYINNLKKNGILIINSDDNNLLKIKRQINRKDISIFSYGSGDLSD 255
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_AGRVS (UDP-N-acetylmuramate--L-alanine ligase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=murC PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.423e-13 Identity = 47/122 (38.52%), Postives = 73/122 (59.84%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 667 K+TT SM+A +L+A D T I G + + + G G+ V+EADE DG FL L VAVVTN+D EH+D + + DAV++ FR+F++ + G V+C D ++L+ +I+ + Y Sbjct: 118 KTTTTSMVAALLEAGQLDPTVINGGIINAYGTNARM-GEGEWMVVEADESDGTFLKLPADVAVVTNIDPEHLDHYGNFDAVRAAFRQFVENVPFYGFGVMCLDHPEVQALVGRIEDRKVVTY 238
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_PHEZH (UDP-N-acetylmuramate--L-alanine ligase OS=Phenylobacterium zucineum (strain HLK1) GN=murC PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 610 K+TT SM+A +L A G D T + G + + + G G V+EADE DG FL L +VAVVTN+D EH+D + D +AVK F+ F++ I G +C D Sbjct: 121 KTTTTSMVAAILDAGGLDPTVVNGGIINAYGTNAKV-GAGDWIVVEADESDGTFLKLKSTVAVVTNIDPEHLDHYGDFEAVKKAFQDFVENIPFYGFAAVCLD 222
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_MYCUA (UDP-N-acetylmuramate--L-alanine ligase OS=Mycobacterium ulcerans (strain Agy99) GN=murC PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 40/113 (35.40%), Postives = 64/113 (56.64%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 640 K+TT SM L+ G D + VG + + + +G G FV EADE DG L +P VAVVTN++ +H+D + +A +F F++++ GG LV+C D + +L ++ Sbjct: 126 KTTTTSMAIVALQHCGRDPSFAVGGELGEAGTNA-HHGSGDYFVAEADESDGSLLEYTPHVAVVTNIEADHLDFYGSTEAYVGVFDAFVERLAPGGALVVCADDPGSAALAER 237
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_GEOLS (UDP-N-acetylmuramate--L-alanine ligase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=murC PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 43/117 (36.75%), Postives = 67/117 (57.26%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 649 K+TT SM+A VL G D T ++G + + G GK V EADE DG FL LSP++AVVTN+D +H+D + + +K F F+ ++ G V+C + + ++ +IK+ Sbjct: 116 KTTTTSMVATVLTHAGIDPTIVIGGKLNTLGSNAKL-GQGKFLVAEADESDGSFLTLSPTIAVVTNIDADHLDYYTGGLEQIKDTFVSFINKVPFYGLAVLCQEDRNINEIIPRIKK 231
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_CORDI (UDP-N-acetylmuramate--L-alanine ligase OS=Corynebacterium diphtheriae GN=murC PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 43/130 (33.08%), Postives = 70/130 (53.85%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQ 691 K++T SM L+A G D + +G + + + G GK FV EADE D L P +AVVTN++ +H+D F+ +A +F F ++++ GG LV+C D A +L ++ K ++ G + Q Sbjct: 122 KTSTTSMAVVALQAAGKDPSFAIGGQLNKAGTNA-HDGTGKAFVAEADESDASLLRYKPDIAVVTNIEPDHLDFFKTSEAYFKVFDDFAERVQPGGTLVVCLDDPHAAALGEKFKDRMTVRGYGSPAAAQ 250
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_BORAP (UDP-N-acetylmuramate--L-alanine ligase OS=Borrelia afzelii (strain PKo) GN=murC PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 38/116 (32.76%), Postives = 63/116 (54.31%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 649 K+TT + L + +G + IVG+ V F D S G F+ E EY FL SP++ ++TN+D+EHVD FE+ +A++ F +++ ++ G L+I D + QI + Sbjct: 125 KTTTTAFLGLLFNKLGLNPNVIVGSSVKDFGDNSAIAGISNIFIAETCEYKKHFLHFSPNMLILTNIDYEHVDFFENYEALEDAFLQYINNLKKNGILIINSDDNNLLKIKRQINR 240
BLAST of DR404625 vs. ExPASy Swiss-Prot
Match: MURC_XANP2 (UDP-N-acetylmuramate--L-alanine ligase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=murC PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13 Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 2 Query: 302 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 667 K+TT SM+A +L A D T I G + + + G G V+EADE DG FL L VA+VTN+D EH+D F+ D V+ F+ F++ + G V+C D ++L+ +I+ + Y Sbjct: 118 KTTTTSMVAALLDAGNFDPTVINGGIINAYGTNARL-GDGNWMVVEADESDGTFLKLPTEVAIVTNVDPEHLDHFKTFDKVQDAFKTFVENVPFYGFAVMCIDHPVVQALVGRIEDRRVITY 238 The following BLAST results are available for this feature:
BLAST of DR404625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404625 ID=DR404625; Name=DR404625; organism=Citrus sinensis; type=EST; length=709bpback to top |