DR404605

Overview
NameDR404605
Unique NameDR404605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: UGL_BURA4 (Ureidoglycolate lyase OS=Burkholderia ambifaria (strain MC40-6) GN=BamMC406_5393 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.823e-39
Identity = 93/203 (45.81%), Postives = 119/203 (58.62%), Query Frame = 2
Query:  158 KIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG------PV--KVGQKITAGITGL 739
            K + +G NYA HA E G  VPKEPV+F K TSS  G    I++P        EVEL VVIG   +DV E  A+DYV GY V  D++ RE Q      G  W   KG DTF PI   ++ +  VPDP  ++LWL++DG   Q G+T+ M+F +  L++++S+ MTL  GDVI TGTP GVG      PV  K GQ +  GI GL
Sbjct:   72 KFIGIGLNYADHAAEAGMPVPKEPVVFGKWTSSICGPNDGIDIPKGSVKTDWEVELGVVIGTTCKDVDEARALDYVAGYCVVNDVSEREWQI---ERGGQWDKGKGFDTFGPIGPWLVTRDEVPDPQRVDLWLEIDGHRYQNGNTRTMVFTVAQLVAYLSTCMTLQPGDVITTGTPPGVGMGIKPSPVFLKAGQTVRLGIDGL 271          
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: HPCE_ECOLX (Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase OS=Escherichia coli GN=hpcE PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.112e-38
Identity = 84/194 (43.30%), Postives = 125/194 (64.43%), Query Frame = 2
Query:  161 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTP-ISSVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGL 739
            + A+G NYA HA EL    P+EP++FLK  ++  G+  T   P+ ++ +H+E EL VVIG++AR+V E  AMDYV GY V  D   R+   +     L     K +D  TP +S+++PK A+PDPHNL L   V+GE+RQ+G+T D+IF +P+LI+++S  MTL  GD+I TGTP+G+    VG ++   + G+
Sbjct:  225 LFALGLNYADHASELEFKPPEEPLVFLKAPNTLTGDNQTSVRPNNIEYMHYEAELVVVIGKQARNVSEADAMDYVAGYTVCNDYAIRDYLENYYRPNLR---VKSRDGLTPMLSTIVPKEAIPDPHNLTLRTFVNGELRQQGTTADLIFSVPFLIAYLSEFMTLNPGDMIATGTPKGLS--DVGDEVVVEVEGV 413          

HSP 2 Score: 78.5666 bits (192), Expect = 4.257e-14
Identity = 54/169 (31.95%), Postives = 86/169 (50.89%), Query Frame = 2
Query:  212 AVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKI 718
            A PK  V F+KP ++ +G G  I  P   ++L     +A+++G+ A  V E  A +Y+ GYA+A D++  E     +S   P   AK +D F PI   +  S V    NL ++ +++G      +T D+      L+S +S   TL  GD IL GTPQ    ++ G ++
Sbjct:   30 APPKTAVWFIKPRNTVIGCGEPIPFPQG-ENLLSGATVALIVGKTATKVREEDAAEYIAGYALANDVSLPE-----ESFYRPAIKAKCRDGFCPIGETVALSNVD---NLTIYTEINGRPADHWNTSDLQRNAAQLLSALSEFATLNPGDAILLGTPQARVEIQPGDRV 189          
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: FMP41_YEAST (Uncharacterized mitochondrial hydrolase FMP41 OS=Saccharomyces cerevisiae GN=FMP41 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.478e-38
Identity = 90/244 (36.89%), Postives = 139/244 (56.97%), Query Frame = 2
Query:  143 IQAGTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLG-------------------------NGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETT---AMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPD-PHNLE----LWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGI----TGLLDVNFDIE 763
            ++A  KI+ +GRNYAAH KEL N+ PK+P  FLKPTSS +                          N G I +P  +  +HHE+ELA+++ +   +V +       D + G A+ALD+TAR +Q  AK  GLPWT++KG DTF PIS+++ +        NL+    +   V+G++RQ G T  M+  +  ++ HIS++++L  GD+ILTGTP GVG +K G ++   +      ++D+NF+ E
Sbjct:    6 LKAARKIICIGRNYAAHIKELNNSTPKQPFFFLKPTSSIVTPLSSSLVKTTRPANSTFNGLNEDGTNPGPIFIPRGV-KVHHEIELALIVSKHLSNVTKMKPEEVYDSISGVALALDLTARNVQDEAKKKGLPWTISKGFDTFMPISAIVSREKFSSYKSNLQDIFRVKCSVNGQLRQDGGTNLMLHPLHKILQHISTMISLEPGDIILTGTPAGVGELKPGDRVHCELLQNNDNIVDMNFECE 248          
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: Y2225_ARCFU (Uncharacterized protein AF_2225 OS=Archaeoglobus fulgidus GN=AF_2225 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.606e-37
Identity = 85/192 (44.27%), Postives = 123/192 (64.06%), Query Frame = 2
Query:  155 TKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGI 730
            +KI+AVG NY  HA+EL   VP+EP+LF+KP+++ +G+   I +P     + +E ELAVVI +  R+VPET A DY+ GY    D+TAR++Q  AK     WT AK  DTF P+   +  + + DP  L +  +V+G++ QK +T ++IF +  L+S +SS+MTL  GDVI TGTP GVG +K G  +   I
Sbjct:   44 SKIIAVGLNYIDHAEELNMPVPEEPILFMKPSTAVIGHDDCIILPQISQRVDYEGELAVVIAEDCRNVPETNAADYILGYTCFNDVTARDLQ--AKDG--QWTRAKSFDTFAPLGPYI--AEIDDPSKLGIQTRVNGKVVQKSNTSNLIFDVFQLVSFVSSVMTLKAGDVIATGTPAGVGMLKDGDVVEVEI 229          
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: HPAG_SALDU (4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase OS=Salmonella dublin GN=hpaG PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.104e-37
Identity = 85/200 (42.50%), Postives = 121/200 (60.50%), Query Frame = 2
Query:  143 IQAGTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGL 739
            + A   + A+G NYA HA EL    PKEP++F+K  +++  +  T   P+ ++ +H+E EL VVIG+ AR V E  AM+YV GY V  D   R+   +     L     K +D  TPI   ++ K AV DPHNL L   V+GE+RQ+G+T D+IF IP+LIS++S  MTL  GD+I TGTP+G+  V  G ++   I G+
Sbjct:  219 LSATGTLFALGLNYADHASELAFTPPKEPLVFIKAPNTFTEHHQTSVRPNNVEYMHYEAELVVVIGKTARKVSEAEAMEYVAGYTVCNDYAIRDYLENYYRPNLR---VKSRDGLTPIGPWIVDKEAVSDPHNLTLRTFVNGELRQEGTTADLIFSIPFLISYLSEFMTLQPGDMIATGTPKGLSDVVPGDEVVLEIKGV 415          

HSP 2 Score: 72.4034 bits (176), Expect = 3.050e-12
Identity = 52/177 (29.38%), Postives = 84/177 (47.46%), Query Frame = 2
Query:  209 NAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGL 739
            NA PK  V F+KP ++ + +G  I  P   + +     +A+++G+ A       A +Y+ GYA+A      E+    +S   P   AK +D F P+  + P S   D  NL +  +++G      +T D+      L+S +S   TL  GD IL GTPQ    ++ G ++     GL
Sbjct:   29 NAPPKTAVWFIKPRNTVIRHGEPILYPQG-EKVLSGATVALIVGKTASRKRSEAAAEYIAGYALA-----NEVSLPEESFYRPAIKAKCRDGFCPLGEMAPLS---DVDNLTIITEINGREADHWNTADLQRSAAQLLSALSEFATLNPGDAILLGTPQNRVALRPGDRVRILAKGL 196          
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: FAH2A_HUMAN (Fumarylacetoacetate hydrolase domain-containing protein 2A OS=Homo sapiens GN=FAHD2A PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.151e-35
Identity = 80/180 (44.44%), Postives = 113/180 (62.78%), Query Frame = 2
Query:  158 KIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPIS-SVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 694
            K+V VG NY  H KE    VPKEP++F K  SS +G    + +P     +  EVELAVVIG+K + +  T AM +V G+ VA D++AR+ Q   +  G  W + K  DTF P+  +++ K +V DPHNL++  +V+GE+ Q G+T  M+FK   LI+ +S  +T + GDVILTGTP GVG
Sbjct:  107 KVVCVGMNYVDHCKEQNVPVPKEPIIFSKFASSIVGPYDEVVLPPQSQEVDWEVELAVVIGKKGKHIKATDAMAHVAGFTVAHDVSARDWQ--MRRNGKQWLLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSGNTNQMVFKTEDLIAWVSQFVTFYPGDVILTGTPPGVG 284          
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: FAHD2_BOVIN (Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Bos taurus GN=FAHD2 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.461e-35
Identity = 78/180 (43.33%), Postives = 113/180 (62.78%), Query Frame = 2
Query:  158 KIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPIS-SVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 694
            K+V VG NYA H +E    VPKEP++F K  S+ +G    I +P     +  EVELAVVIG++ + +  T AM +V G+ VA D++AR+ Q      G  W + K  DTF P+  +++ K +V DPHNL++  +V+GE+ Q  +T  M+FK   LI+ +S  +TL+ GD+ILTGTP GVG
Sbjct:  107 KVVCVGMNYADHCREQNVPVPKEPIIFSKFASAIVGPYDNIILPPESQEVDWEVELAVVIGKRGKYIKATDAMAHVAGFTVAHDVSARDWQMGRN--GKQWLLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGELMQSSNTNQMVFKTEELITWVSQFVTLYPGDIILTGTPPGVG 284          
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: FAH2B_HUMAN (Fumarylacetoacetate hydrolase domain-containing protein 2B OS=Homo sapiens GN=FAHD2B PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 78/180 (43.33%), Postives = 112/180 (62.22%), Query Frame = 2
Query:  158 KIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPIS-SVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 694
            K+V VG NY  H KE    VPKEP++F K  SS +G    + +P     +  EVELAVVIG+K + +  T AM +V G+ VA D++AR+  +  +  G  W + K  DTF P+  +++ K +V DPHNL++  +V+GE+ Q  +T  M+FK   LI+ +S  +T + GDVILTGTP GVG
Sbjct:  107 KVVCVGMNYVDHCKEQNVPVPKEPIIFSKFASSIVGPYDEVVLPPQSQEVDWEVELAVVIGKKGKHIKATDAMAHVAGFTVAHDVSARDWLT--RRNGKQWLLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSSNTNQMVFKTEDLIAWVSQFVTFYPGDVILTGTPPGVG 284          
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: FAHD2_MOUSE (Fumarylacetoacetate hydrolase domain-containing protein 2A OS=Mus musculus GN=Fahd2 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.316e-34
Identity = 75/180 (41.67%), Postives = 112/180 (62.22%), Query Frame = 2
Query:  158 KIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPIS-SVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 694
            K++ VG NYA H +E    VPK P++F K +SS +G    I +P     +  EVE+AVVIG+K + +  T  M +V G+ VA D++AR+ Q      G  W + K  DTF P+  +++ K  + DPHNL++  +V+GE+ Q  +T  M+FK  YLI+ +S  +TL+ GD++LTGTP GVG
Sbjct:  107 KVICVGLNYADHCQEQNVRVPKSPIIFSKFSSSIVGPYDEIILPPESKEVDWEVEMAVVIGKKGKHIKATDVMAHVAGFTVAHDVSARDWQ---MRNGKQWLLGKTFDTFCPLGPALVTKDTIADPHNLKICCRVNGEVVQSSNTNQMVFKTEYLIAWVSQFVTLYPGDLLLTGTPPGVG 283          
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: FAHD2_RAT (Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus GN=Fahd2 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.250e-34
Identity = 76/180 (42.22%), Postives = 112/180 (62.22%), Query Frame = 2
Query:  158 KIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPIS-SVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 694
            K++ VG NYA H +E    VPK P++F K +SS +G   +I +P     +  EVE+AVVIG+K + +  T  M YV G+ VA D++AR+ Q      G  W + K  DTF P+  +++ K  + DPHNL++  +V+GEI Q  +T  M+FK   LI+ +S  +TL+ GD++LTGTP GVG
Sbjct:  107 KVICVGLNYADHCQEQNVRVPKNPIIFSKFSSSIVGPYDSIILPPESKEVDWEVEMAVVIGKKGKHIKATDVMAYVAGFTVAHDVSARDWQ---MRNGKQWLLGKTFDTFCPLGPALVTKDTIADPHNLKISCRVNGEIVQSSNTNQMVFKTEDLIAWVSQFVTLYPGDILLTGTPPGVG 283          
The following BLAST results are available for this feature:
BLAST of DR404605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
UGL_BURA43.823e-3945.81Ureidoglycolate lyase OS=Burkholderia ambifaria (s... [more]
HPCE_ECOLX1.112e-3843.30Homoprotocatechuate catabolism bifunctional isomer... [more]
FMP41_YEAST2.478e-3836.89Uncharacterized mitochondrial hydrolase FMP41 OS=S... [more]
Y2225_ARCFU1.606e-3744.27Uncharacterized protein AF_2225 OS=Archaeoglobus f... [more]
HPAG_SALDU6.104e-3742.504-hydroxyphenylacetate degradation bifunctional is... [more]
FAH2A_HUMAN1.151e-3544.44Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD2_BOVIN7.461e-3543.33Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAH2B_HUMAN2.171e-3443.33Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD2_MOUSE6.316e-3441.67Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD2_RAT8.250e-3442.22Fumarylacetoacetate hydrolase domain-containing pr... [more]

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Properties
Property NameValue
Genbank descriptionCSAE-PNP1243N23 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone CSAE-PNP1243N23 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404605 ID=DR404605; Name=DR404605; organism=Citrus sinensis; type=EST; length=763bp
TGTGTTGGTCCCGNNNNNTCGGCCATTACGGCCGGGGGAACTGATGATGT
TGCTGGGTAGCTAGCACAGAACGAATTTTGGGTCAATCAGAATCAGAATC
GCTTAAGCGATGGCGACTGCATCATCAGCCGTACAAAAGCTCATTCAAGC
AGGCACCAAGATCGTGGCCGTTGGCCGTAACTATGCGGCTCACGCCAAAG
AGCTCGGCAACGCCGTGCCCAAGGAGCCGGTTTTGTTTCTCAAACCGACG
TCGTCTTATTTAGGAAACGGAGGGACCATCGAGGTACCTCATCCCCTGGA
TTCGCTTCATCATGAAGTGGAGCTTGCAGTCGTGATCGGACAGAAAGCTC
GAGATGTGCCTGAAACCACTGCCATGGACTATGTTGGAGGCTATGCAGTG
GCACTTGATATGACTGCGAGGGAAATCCAATCTTCTGCCAAGTCTGCAGG
TCTTCCGTGGACAGTGGCTAAAGGGCAGGACACCTTCACACCAATTAGCT
CTGTCCTACCAAAGTCAGCAGTGCCTGACCCTCACAACCTGGAACTATGG
TTAAAGGTTGATGGAGAGATTCGACAGAAAGGCTCCACTAAGGATATGAT
TTTTAAGATACCATATCTAATTAGCCACATAAGTTCAATTATGACACTTT
TTGAAGGAGATGTCATATTAACAGGCACTCCACAGGGCGTTGGCCCTGTA
AAAGTTGGTCAAAAGATAACAGCTGGTATAACGGGCCTCCTGGATGTAAA
CTTTGATATTGAA
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