DR404605

Overview
NameDR404605
Unique NameDR404605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: Y837_STAAB (Uncharacterized protein SAB0837 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0837 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.666e-26
Identity = 74/180 (41.11%), Postives = 101/180 (56.11%), Query Frame = 2 
Query:  161 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 694
            ++A GRNY  HA EL + V K  V F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS    A L  ++  G     P+   ++ K  +P P N+ +  KV+ EIRQ G+T +MI KI  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYKDHANELNHEVEKLYV-FTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGG----CPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269
[Close]
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: Y829_STAAN (Uncharacterized protein SA0829 OS=Staphylococcus aureus (strain N315) GN=SA0829 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.666e-26
Identity = 74/180 (41.11%), Postives = 101/180 (56.11%), Query Frame = 2 
Query:  161 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 694
            ++A GRNY  HA EL + V K  V F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS    A L  ++  G     P+   ++ K  +P P N+ +  KV+ EIRQ G+T +MI KI  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYKDHANELNHEVEKLYV-FTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGG----CPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269
[Close]
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: Y930_STAAR (Uncharacterized protein SAR0930 OS=Staphylococcus aureus (strain MRSA252) GN=SAR0930 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.842e-25
Identity = 72/180 (40.00%), Postives = 100/180 (55.56%), Query Frame = 2 
Query:  161 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 694
            ++A GRNY  HA EL + V +  V F K  SS  G+   I     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS    A L  ++  G     P+   ++ K  +P P N+ +  KV+ EIRQ G+T +MI KI  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYKDHANELNHEVERLYV-FTKAASSLTGDNAKIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGG----CPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269
[Close]
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: Y1806_STAS1 (Uncharacterized protein SSP1806 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1806 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.104e-25
Identity = 70/180 (38.89%), Postives = 101/180 (56.11%), Query Frame = 2 
Query:  161 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 694
            ++A GRNY  HA EL + V +  V F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ Q++   A L  ++  G     P+   ++ K  +P P ++ +  KV+ +IRQ G+T  MI KI  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYQDHANELNHEVQRLYV-FTKAASSLTGDNSTIPNHKDITDQLDYEGELGIVIGKSGEKIPKGLALDYVYGYTIINDITDRKAQNAQDQAFLSKSLTGG----CPVGPYIVTKDELPTPEDVNIVTKVNNDIRQDGNTGQMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269
[Close]
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: Y1982_STAHJ (Uncharacterized protein SH1982 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH1982 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.360e-25
Identity = 70/180 (38.89%), Postives = 100/180 (55.56%), Query Frame = 2 
Query:  161 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 694
            ++A GRNY  HA EL + V +  V F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DY+ GY +  D+T R+ Q+    A L  ++  G     P+   ++ K  +P P N+ +  KV+ +IRQ G+T  MI KI  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYQDHASELNHEVQRLYV-FTKAASSLTGDESTIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYIYGYTIINDITDRKAQNEQDQAFLSKSLTGG----CPMGPYIVTKDELPTPENVNIVTKVNNDIRQDGNTSQMINKIDDLIEEISKYVALHPGDIIATGTPAGVG 269
[Close]
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: Y665_STAES (Uncharacterized protein SE_0665 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_0665 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.194e-24
Identity = 72/179 (40.22%), Postives = 98/179 (54.75%), Query Frame = 2 
Query:  161 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 694
            ++A GRNY  HA EL + V    V F K  SS  G+  TI     + + L +E EL +VIG+    +P   A+DY+ GY +  D+T R  QSS   A L  ++  G     P   ++ K  +P P N+ +  KV+ EIRQ G+T +MI KI  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYEDHASELNHEVDSLYV-FTKAASSLTGDEATIPNHKDITEQLDYEGELGIVIGKSGEKIPRGLALDYIYGYTIINDITDRTAQSSHDQAFLSKSLT-GACPMGPY--IVTKDELPAPENVNIVTKVNNEIRQDGNTGEMILKIDELIEKISKYVALHPGDIIATGTPAGVG 269
[Close]
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: Y556_STAEQ (Uncharacterized protein SERP0556 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0556 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.194e-24
Identity = 72/179 (40.22%), Postives = 98/179 (54.75%), Query Frame = 2 
Query:  161 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 694
            ++A GRNY  HA EL + V    V F K  SS  G+  TI     + + L +E EL +VIG+    +P   A+DY+ GY +  D+T R  QSS   A L  ++  G     P   ++ K  +P P N+ +  KV+ EIRQ G+T +MI KI  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYEDHASELNHEVDSLYV-FTKAASSLTGDEATIPNHKDITEQLDYEGELGIVIGKSGEKIPRGLALDYIYGYTIINDITDRTAQSSHDQAFLSKSLT-GACPMGPY--IVTKDELPAPENVNIVTKVNNEIRQDGNTGEMILKIDELIEKISKYVALHPGDIIATGTPAGVG 269
The following BLAST results are available for this feature:
BLAST of DR404605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
Y837_STAAB1.666e-2641.11Uncharacterized protein SAB0837 OS=Staphylococcus ... [more]
Y829_STAAN1.666e-2641.11Uncharacterized protein SA0829 OS=Staphylococcus a... [more]
Y930_STAAR1.842e-2540.00Uncharacterized protein SAR0930 OS=Staphylococcus ... [more]
Y1806_STAS14.104e-2538.89Uncharacterized protein SSP1806 OS=Staphylococcus ... [more]
Y1982_STAHJ5.360e-2538.89Uncharacterized protein SH1982 OS=Staphylococcus h... [more]
Y665_STAES1.194e-2440.22Uncharacterized protein SE_0665 OS=Staphylococcus ... [more]
Y556_STAEQ1.194e-2440.22Uncharacterized protein SERP0556 OS=Staphylococcus... [more]

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Properties
Property NameValue
Genbank descriptionCSAE-PNP1243N23 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone CSAE-PNP1243N23 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404605 ID=DR404605; Name=DR404605; organism=Citrus sinensis; type=EST; length=763bp
TGTGTTGGTCCCGNNNNNTCGGCCATTACGGCCGGGGGAACTGATGATGT
TGCTGGGTAGCTAGCACAGAACGAATTTTGGGTCAATCAGAATCAGAATC
GCTTAAGCGATGGCGACTGCATCATCAGCCGTACAAAAGCTCATTCAAGC
AGGCACCAAGATCGTGGCCGTTGGCCGTAACTATGCGGCTCACGCCAAAG
AGCTCGGCAACGCCGTGCCCAAGGAGCCGGTTTTGTTTCTCAAACCGACG
TCGTCTTATTTAGGAAACGGAGGGACCATCGAGGTACCTCATCCCCTGGA
TTCGCTTCATCATGAAGTGGAGCTTGCAGTCGTGATCGGACAGAAAGCTC
GAGATGTGCCTGAAACCACTGCCATGGACTATGTTGGAGGCTATGCAGTG
GCACTTGATATGACTGCGAGGGAAATCCAATCTTCTGCCAAGTCTGCAGG
TCTTCCGTGGACAGTGGCTAAAGGGCAGGACACCTTCACACCAATTAGCT
CTGTCCTACCAAAGTCAGCAGTGCCTGACCCTCACAACCTGGAACTATGG
TTAAAGGTTGATGGAGAGATTCGACAGAAAGGCTCCACTAAGGATATGAT
TTTTAAGATACCATATCTAATTAGCCACATAAGTTCAATTATGACACTTT
TTGAAGGAGATGTCATATTAACAGGCACTCCACAGGGCGTTGGCCCTGTA
AAAGTTGGTCAAAAGATAACAGCTGGTATAACGGGCCTCCTGGATGTAAA
CTTTGATATTGAA
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