CX070714
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070714 vs. ExPASy Swiss-Prot
Match: RR3_SOLTU (30S ribosomal protein S3, chloroplastic OS=Solanum tuberosum GN=rps3 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.362e-23 Identity = 50/57 (87.72%), Postives = 55/57 (96.49%), Query Frame = 1 Query: 1 VQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 171 +QIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSYTVRTIYG+LGIKIWIF+DE+ Sbjct: 162 IQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGILGIKIWIFLDEE 218
BLAST of CX070714 vs. ExPASy Swiss-Prot
Match: RR3_SOLLC (30S ribosomal protein S3, chloroplastic OS=Solanum lycopersicum GN=rps3 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.362e-23 Identity = 50/57 (87.72%), Postives = 55/57 (96.49%), Query Frame = 1 Query: 1 VQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 171 +QIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSYTVRTIYG+LGIKIWIF+DE+ Sbjct: 162 IQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGILGIKIWIFLDEE 218
BLAST of CX070714 vs. ExPASy Swiss-Prot
Match: RR3_SOLBU (30S ribosomal protein S3, chloroplastic OS=Solanum bulbocastanum GN=rps3 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.362e-23 Identity = 50/57 (87.72%), Postives = 55/57 (96.49%), Query Frame = 1 Query: 1 VQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 171 +QIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSYTVRTIYG+LGIKIWIF+DE+ Sbjct: 162 IQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGILGIKIWIFLDEE 218
BLAST of CX070714 vs. ExPASy Swiss-Prot
Match: RR3_LIRTU (30S ribosomal protein S3, chloroplastic OS=Liriodendron tulipifera GN=rps3 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.362e-23 Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 1 Query: 1 VQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 171 VQIAGR+DGKEIAR EWIREGRVPLQTI AKID+CSYTVRTIYGVLGIKIWIFVDE+ Sbjct: 163 VQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDHCSYTVRTIYGVLGIKIWIFVDEQ 219
BLAST of CX070714 vs. ExPASy Swiss-Prot
Match: RR3_DRIGR (30S ribosomal protein S3, chloroplastic OS=Drimys granadensis GN=rps3 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.362e-23 Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 1 Query: 1 VQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 171 VQIAGR+DGKEIAR EWIREGRVPLQTI AKID+CSYTVRTIYGVLGIKIWIFVDE+ Sbjct: 160 VQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDHCSYTVRTIYGVLGIKIWIFVDEQ 216
BLAST of CX070714 vs. ExPASy Swiss-Prot
Match: RR3_CALFG (30S ribosomal protein S3, chloroplastic OS=Calycanthus floridus var. glaucus GN=rps3 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.362e-23 Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 1 Query: 1 VQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 171 VQIAGR+DGKEIAR EWIREGRVPLQTI AKID+CSYTVRTIYGVLGIKIWIFVDE+ Sbjct: 162 VQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDHCSYTVRTIYGVLGIKIWIFVDEQ 218
BLAST of CX070714 vs. ExPASy Swiss-Prot
Match: RR3_VITVI (30S ribosomal protein S3, chloroplastic OS=Vitis vinifera GN=rps3 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.778e-23 Identity = 52/57 (91.23%), Postives = 54/57 (94.74%), Query Frame = 1 Query: 1 VQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 171 VQIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSY VRTIYGVLGIKIWIFVDE+ Sbjct: 162 VQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYRVRTIYGVLGIKIWIFVDEE 218
BLAST of CX070714 vs. ExPASy Swiss-Prot
Match: RR3_MORIN (30S ribosomal protein S3, chloroplastic OS=Morus indica GN=rps3 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.778e-23 Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 1 Query: 1 VQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDE 168 +QIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSYTVRTIYG LGIKIWIFVDE Sbjct: 160 IQIAGRIDGKEIARVEWIREGRVPLQTIKAKIDYCSYTVRTIYGALGIKIWIFVDE 215
BLAST of CX070714 vs. ExPASy Swiss-Prot
Match: RR3_COFAR (30S ribosomal protein S3, chloroplastic OS=Coffea arabica GN=rps3 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.778e-23 Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 1 Query: 1 VQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 171 VQIAGR+DGKEIAR EWIR GRVPLQTI AKIDYCSYTVRTIYGVLGIKIWIF+DE+ Sbjct: 162 VQIAGRIDGKEIARVEWIRRGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDEE 218
BLAST of CX070714 vs. ExPASy Swiss-Prot
Match: RR3_PANGI (30S ribosomal protein S3, chloroplastic OS=Panax ginseng GN=rps3 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.322e-23 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 1 Query: 1 VQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVD 165 VQIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSYTVRTIYGVLGIKIWIF+D Sbjct: 162 VQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFID 216 The following BLAST results are available for this feature:
BLAST of CX070714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070714 ID=CX070714; Name=CX070714; organism=Citrus sinensis; type=EST; length=781bpback to top |