DR404527

Overview
NameDR404527
Unique NameDR404527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: PPM1K_HUMAN (Protein phosphatase 1K, mitochondrial OS=Homo sapiens GN=PPM1K PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.388e-21
Identity = 59/160 (36.88%), Postives = 97/160 (60.62%), Query Frame = 2
Query:   41 GSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSK--EKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIH-LSSEPDVK-VEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKF 508
            G+TA  A+L +G +LVVA+VGDSRA++ + G   +L++DH P +  EK  I+  GGFV+      P V+G+LA+ R+ GD  LK   + +EP+ K +++   D  F++L +DGI  ++ +QE  D +    D   AA  + E A+   ++D+ + +VV F
Sbjct:  187 GTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPF 346          
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: PPM1K_BOVIN (Protein phosphatase 1K, mitochondrial OS=Bos taurus GN=PPM1K PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.388e-21
Identity = 58/160 (36.25%), Postives = 97/160 (60.62%), Query Frame = 2
Query:   41 GSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSK--EKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIH-LSSEPDVK-VEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKF 508
            G+TA  A+L +G +LV+A+VGDSRA++ + G   +L++DH P +  EK  I+  GGFV+      P V+G+LA+ R+ GD  LK   + +EP+ K +++   D  F++L +DGI  ++ +QE  D +    D   AA  + E A+   ++D+ + +VV F
Sbjct:  187 GTTATVALLRDGIELVIASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSLGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNTTAVVVPF 346          
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: P2C49_ORYSJ (Probable protein phosphatase 2C 49 OS=Oryza sativa subsp. japonica GN=Os05g0457200 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.388e-21
Identity = 61/126 (48.41%), Postives = 84/126 (66.67%), Query Frame = 2
Query:   41 GSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRL--IESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIK 412
            GSTAV A+ +   ++VVAN GDSRAV+ + GV   LSVDH+P +   L  I++ GG V  I  D  RV G LA++RA GD  LK +++SEP+V V    DD E +ILASDG+W V+TN+ A + ++
Sbjct:  213 GSTAVVAV-VGPNRVVVANSGDSRAVLCRAGVPVPLSVDHKPDRPDELERIKAAGGRV--IYWDGARVLGVLAMSRAIGDGYLKPYVTSEPEVTVTERADDDECLILASDGLWDVVTNEMACEVVR 335          
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: PPM1G_MOUSE (Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE=2 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 9.190e-21
Identity = 68/183 (37.16%), Postives = 107/183 (58.47%), Query Frame = 2
Query:   41 GSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRL--IESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIH---------LSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIK----------HVKDAKSAAKHLIEHAVSRKSK------DDISCIVVKF 508
            G+TAV A LI G++L+VAN GDSR V+S+ G A  +S DH+P  E  L  I++ GG V+ + G   RV+G L ++RA GD   K +         +S+ PD+KV  +TDD EF+++A DGIW VM++QE VD I+           ++   S  + L++  ++  +       D+++CI++ F
Sbjct:  325 GTTAVVA-LIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVT-MDG---RVNGGLNLSRAIGDHFYKRNKNLPPQEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICF 502          
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: PPM1G_MACFA (Protein phosphatase 1G OS=Macaca fascicularis GN=PPM1G PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.190e-21
Identity = 68/183 (37.16%), Postives = 107/183 (58.47%), Query Frame = 2
Query:   41 GSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRL--IESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIH---------LSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIK----------HVKDAKSAAKHLIEHAVSRKSK------DDISCIVVKF 508
            G+TAV A LI G++L+VAN GDSR V+S+ G A  +S DH+P  E  L  I++ GG V+ + G   RV+G L ++RA GD   K +         +S+ PD+KV  +TDD EF+++A DGIW VM++QE VD I+           ++   S  + L++  ++  +       D+++CI++ F
Sbjct:  329 GTTAVVA-LIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVT-MDG---RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICF 506          
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: PPM1G_HUMAN (Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.190e-21
Identity = 68/183 (37.16%), Postives = 107/183 (58.47%), Query Frame = 2
Query:   41 GSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRL--IESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIH---------LSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIK----------HVKDAKSAAKHLIEHAVSRKSK------DDISCIVVKF 508
            G+TAV A LI G++L+VAN GDSR V+S+ G A  +S DH+P  E  L  I++ GG V+ + G   RV+G L ++RA GD   K +         +S+ PD+KV  +TDD EF+++A DGIW VM++QE VD I+           ++   S  + L++  ++  +       D+++CI++ F
Sbjct:  328 GTTAVVA-LIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVT-MDG---RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICF 505          
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: P2C47_ARATH (Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana GN=At3g51470 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.190e-21
Identity = 60/168 (35.71%), Postives = 106/168 (63.10%), Query Frame = 2
Query:   41 GSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEP--SKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLK------IHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHV----KDAKSAAKHLIEHAVSRKSKDDISCIVVKF 508
            G+TA+TA++++ + +++AN GDSRAV+ K G A +LS DH+P  + E+  IE  GG + +       ++GQL+VARA GD  +K        LS EP+++  ++T++ E++I+  DG+W VM++Q AV  ++       D +  ++ L++ A+ R S D+++ +VV F
Sbjct:  166 GTTALTALILD-KTMLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYD-----GYLNGQLSVARALGDWHIKGTKGSLCPLSCEPELEEIVLTEEDEYLIMGCDGLWDVMSSQCAVTMVRRELMQHNDPERCSQALVKEALQRNSCDNLTVVVVCF 327          
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: PPM1G_BOVIN (Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.200e-20
Identity = 67/183 (36.61%), Postives = 107/183 (58.47%), Query Frame = 2
Query:   41 GSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRL--IESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIH---------LSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIK----------HVKDAKSAAKHLIEHAVSRKSK------DDISCIVVKF 508
            G+TAV A LI G++L+VAN GDSR V+S+ G A  +S DH+P  E  L  I++ GG V+ + G   RV+G L ++RA GD   K +         +S+ PD+KV  +TDD EF+++A DGIW VM++QE +D I+           ++   S  + L++  ++  +       D+++CI++ F
Sbjct:  326 GTTAVVA-LIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVT-MDG---RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVIDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICF 503          
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: P2C27_ARATH (Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.568e-20
Identity = 63/168 (37.50%), Postives = 101/168 (60.12%), Query Frame = 2
Query:   41 GSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEP--SKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLK------IHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHV----KDAKSAAKHLIEHAVSRKSKDDISCIVVKF 508
            G+TA+TA +  G++L++AN GD RAV+ + G A +LS DH+P  + EK  IE  GG V +       ++GQL+VARA GD  +K        LS EP+++   +++D EF+I+  DG+W VM++Q AV   +       D +  ++ L+  A+ R + D+++ IVV F
Sbjct:  183 GTTALTAFIF-GRRLIIANAGDCRAVLGRRGRAIELSKDHKPNCTAEKVRIEKLGGVVYD-----GYLNGQLSVARAIGDWHMKGPKGSACPLSPEPELQETDLSEDDEFLIMGCDGLWDVMSSQCAVTIARKELMIHNDPERCSRELVREALKRNTCDNLTVIVVCF 344          
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: PP2C3_SCHPO (Protein phosphatase 2C homolog 3 OS=Schizosaccharomyces pombe GN=ptc3 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.047e-20
Identity = 63/158 (39.87%), Postives = 88/158 (55.70%), Query Frame = 2
Query:   14 EQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSK--EKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIH--------LSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEH 457
            +  F     G TA T +L  G KL  AN GDSR V+   G+AK LS DH+PS   EK  I + GGFV     D  RV+G LA++RA GD   K          +++ PDV V  ITDD EF++LA DGIW   T+Q+ ++ ++    A ++ + + E+
Sbjct:  110 DDQFHTDPSGCTA-TVVLRVGNKLYCANAGDSRTVLGSKGIAKPLSADHKPSNEAEKARICAAGGFV-----DFGRVNGNLALSRAIGDFEFKNSNLEPEKQIVTALPDVVVHEITDDDEFVVLACDGIWDCKTSQQVIEFVRRGIVAGTSLEKIAEN 261          
The following BLAST results are available for this feature:
BLAST of DR404527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
PPM1K_HUMAN5.388e-2136.88Protein phosphatase 1K, mitochondrial OS=Homo sapi... [more]
PPM1K_BOVIN5.388e-2136.25Protein phosphatase 1K, mitochondrial OS=Bos tauru... [more]
P2C49_ORYSJ5.388e-2148.41Probable protein phosphatase 2C 49 OS=Oryza sativa... [more]
PPM1G_MOUSE9.190e-2137.16Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE... [more]
PPM1G_MACFA9.190e-2137.16Protein phosphatase 1G OS=Macaca fascicularis GN=P... [more]
PPM1G_HUMAN9.190e-2137.16Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE... [more]
P2C47_ARATH9.190e-2135.71Probable protein phosphatase 2C 47 OS=Arabidopsis ... [more]
PPM1G_BOVIN1.200e-2036.61Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2... [more]
P2C27_ARATH1.568e-2037.50Probable protein phosphatase 2C 27 OS=Arabidopsis ... [more]
PP2C3_SCHPO2.047e-2039.87Protein phosphatase 2C homolog 3 OS=Schizosaccharo... [more]

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Properties
Property NameValue
Genbank descriptionCSAE-PNP1243J23 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone CSAE-PNP1243J23 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404527 ID=DR404527; Name=DR404527; organism=Citrus sinensis; type=EST; length=713bp
GGGTAAGATATTGGAGCAAGCATTTGTCCTGGGAAAAGGGGGATCAACAG
CAGTAACAGCAATTCTTATTAATGGTCAGAAACTAGTGGTTGCAAATGTG
GGAGATTCTCGGGCTGTTATATCCAAGAATGGTGTGGCCAAACAACTGTC
TGTTGACCACGAACCAAGCAAGGAAAAGAGACTGATTGAGAGCCGCGGTG
GCTTTGTATCGAACATTCCCGGGGATGTTCCACGTGTTGATGGGCAACTG
GCTGTAGCAAGGGCATTTGGTGACAAGAGTTTGAAAATACACCTTAGCTC
AGAACCTGATGTGAAAGTGGAGATGATTACTGATGATACAGAGTTCATAA
TACTAGCAAGTGATGGGATATGGAAGGTGATGACAAACCAAGAAGCTGTA
GACTGTATCAAACATGTAAAAGATGCTAAGTCAGCAGCAAAGCACTTGAT
AGAACACGCAGTTTCTAGGAAAAGTAAGGATGACATATCTTGCATAGTTG
TAAAGTTCCATCGATAAATTTTGTGGTCTGTCTTTGATGGAGGAAAATTA
TTAGACGAAATGTCTGTATATTGTGGATAAATTTGTTTCTGTAATTGTGG
AGATACATGAAATGTGTCACTAAACTGTTGTTTGCACGATAGAGCATTAT
GAAATTGATTGCTTGAATTTGAACTTCCAGTTAAGTTGAAAAAAAAAAAA
AAAAAAAAAAAAA
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