CX070602
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070602 vs. ExPASy Swiss-Prot
Match: RL2_AZOC5 (50S ribosomal protein L2 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rplB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.247e-11 Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 2 Query: 101 KQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 343 + + K K V+ L T GK S GRN++GRIT+ RGGG K+ R +D KR + VER+EYDPNR+++IA +++ +G Sbjct: 21 RSGLYKGKPVKTL---TEGKSSSGGRNNNGRITVRFRGGGHKQTYRLVDFKRAKRDVSATVERLEYDPNRTAFIALIKYEDG 99
BLAST of CX070602 vs. ExPASy Swiss-Prot
Match: RL2_PARL1 (50S ribosomal protein L2 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rplB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.547e-11 Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 2 Query: 101 KQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 343 + A+ K K V+ L T G KS GRN+ GRIT+ RGGG KR R +D KR + VER+EYDPNR+++IA V++ +G Sbjct: 21 RSALYKGKPVKDL---TEGLTKSGGRNNHGRITVRFRGGGHKRSYRTVDFKRRRYDVPATVERLEYDPNRTAFIALVKYEDG 99
BLAST of CX070602 vs. ExPASy Swiss-Prot
Match: RL2_BRASO (50S ribosomal protein L2 OS=Bradyrhizobium sp. (strain ORS278) GN=rplB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.547e-11 Identity = 39/85 (45.88%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 92 MGTKQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 343 M + A+ K K V+AL T GK S GRN++GRIT+ GGG K+ R +D KR + VER+EYDPNR+++IA V++ +G Sbjct: 18 MVDRSALYKGKPVKAL---TEGKQSSGGRNNTGRITVRFLGGGHKQSYRTVDFKRDKVDVPATVERLEYDPNRTAFIALVKYQDG 99
BLAST of CX070602 vs. ExPASy Swiss-Prot
Match: RL2_RHIEC (50S ribosomal protein L2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=rplB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.245e-11 Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 2 Query: 101 KQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEGVQ 349 + ++ K K V+AL T G KS GRN+ GRIT GGG KR R +D KR I G VER+EYDPNR+++IA V + +G Q Sbjct: 21 RSSLYKGKPVKAL---TEGLTKSGGRNNLGRITARFIGGGHKRSYRLVDFKRRKFDIEGTVERIEYDPNRTAFIALVTYSDGEQ 101
BLAST of CX070602 vs. ExPASy Swiss-Prot
Match: RL2_RHIE6 (50S ribosomal protein L2 OS=Rhizobium etli (strain CIAT 652) GN=rplB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.245e-11 Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = 2 Query: 101 KQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEGVQ 349 + ++ K K V+AL T G KS GRN+ GRIT GGG KR R +D KR + G VER+EYDPNR+++IA V + +G Q Sbjct: 21 RSSLYKGKPVKAL---TEGLTKSGGRNNLGRITARFIGGGHKRSYRLVDFKRRKFDVEGTVERIEYDPNRTAFIALVSYADGEQ 101
BLAST of CX070602 vs. ExPASy Swiss-Prot
Match: RL2_MARAV (50S ribosomal protein L2 OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=rplB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.245e-11 Identity = 35/63 (55.56%), Postives = 44/63 (69.84%), Query Frame = 2 Query: 158 KGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 343 K KS GRN+ GRIT H GGG K+ R ID KRT I ++ER+EYDPNRS+ IA V++ +G Sbjct: 37 KSKSGGRNNVGRITTRHIGGGHKQHYRVIDFKRTKDGIPAVIERLEYDPNRSAHIALVKYADG 99
BLAST of CX070602 vs. ExPASy Swiss-Prot
Match: RL2_FINM2 (50S ribosomal protein L2 OS=Finegoldia magna (strain ATCC 29328) GN=rplB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.245e-11 Identity = 34/69 (49.28%), Postives = 47/69 (68.12%), Query Frame = 2 Query: 140 RQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 343 + T+ KS GRNS GR+TI HRGGG+KR R ID KR I +V+ +EYDPNR++ IA +++ +G Sbjct: 31 KSLTVSLNKSGGRNSYGRVTIRHRGGGAKRKYRIIDFKRNKDGIKAVVKSIEYDPNRTANIALLQYEDG 99
BLAST of CX070602 vs. ExPASy Swiss-Prot
Match: RL2_ACICJ (50S ribosomal protein L2 OS=Acidiphilium cryptum (strain JF-5) GN=rplB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.245e-11 Identity = 41/101 (40.59%), Postives = 59/101 (58.42%), Query Frame = 2 Query: 44 AIQSISGVGANL*GNRMGTKQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 343 A++ V A+L G + + + K K V+ L T G S GRN+ GR T+ RGGG KR R +D KR + VER+EYDPNRS+++A V++ +G Sbjct: 2 ALKHFKPVTASLRGTVLVDRSELWKGKPVKGL---TEGLTSSGGRNNHGRTTVRFRGGGHKRAYRVVDFKRRKFDVAATVERLEYDPNRSAFLALVKYEDG 99
BLAST of CX070602 vs. ExPASy Swiss-Prot
Match: RK2_CHAVU (50S ribosomal protein L2, chloroplastic OS=Chara vulgaris GN=rpl2 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.245e-11 Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 95 GTK-QAMTKFKEVRALR---QFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 343 GT+ ++++ +K + L+ T GK GRN+ G IT HRGGG KRL R+ID +R I GIV+ +EYDPNR+S I V + +G Sbjct: 12 GTRNRSVSDYKNISCLKPEKSLTSGKMSKKGRNNQGIITSRHRGGGHKRLYRKIDFRRKKIGIYGIVKTIEYDPNRNSHICLVNYEDG 99
BLAST of CX070602 vs. ExPASy Swiss-Prot
Match: RL2_SYNFM (50S ribosomal protein L2 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rplB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.462e-11 Identity = 37/88 (42.05%), Postives = 49/88 (55.68%), Query Frame = 2 Query: 83 GNRMGTKQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 343 G R T + V + +S GRN+SGR+T +HRGGG KR R ID KR +I V +EYDPNRSS IA +++ +G Sbjct: 12 GRRFQTYATFEELSNVEPEKSLLEPLRRSGGRNASGRVTSWHRGGGHKRRYRIIDFKRNKENIPATVASIEYDPNRSSHIALLKYADG 99 The following BLAST results are available for this feature:
BLAST of CX070602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070602 ID=CX070602; Name=CX070602; organism=Citrus sinensis; type=EST; length=748bpback to top |