CX070594

Overview
NameCX070594
Unique NameCX070594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_THEEB (Glutamate-1-semialdehyde 2,1-aminomutase OS=Thermosynechococcus elongatus (strain BP-1) GN=hemL PE=1 SV=2)

HSP 1 Score: 308.531 bits (789), Expect = 2.529e-83
Identity = 145/189 (76.72%), Postives = 167/189 (88.36%), Query Frame = 1
Query:  190 FTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 756
            F   KS+E F  A++LMPGGV+SPVRAFKSVGGQPIVFD VKG+H+WD+DGN+YIDYVGSWGPAI+GHA  +V+ AL   ++KGTSFGAPCLLEN+LAEMVI+AVPS+EMVRFVNSGTEACM VLRL RA+T RE++IKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVPK  T  TLTAP+ND+ A+
Sbjct:   11 FQTTKSQEIFAAAQKLMPGGVSSPVRAFKSVGGQPIVFDHVKGAHIWDVDGNQYIDYVGSWGPAIVGHAHPEVIDALHAALEKGTSFGAPCLLENILAEMVIAAVPSVEMVRFVNSGTEACMAVLRLMRAYTQREKVIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPKATTAATLTAPYNDLEAV 199          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_CYAP4 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=hemL PE=3 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 3.303e-83
Identity = 147/190 (77.37%), Postives = 164/190 (86.32%), Query Frame = 1
Query:  190 FTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            F   KSEE F  A++LMPGGVNSPVRAFKSVGG PIVFD V+G+++WD+DGN+YIDYVGSWGPAI GHA  +V+ AL   + KGTSFGAPCLLENVLAEMVI  VPSIEMVRFVNSGTEACM +LRL RA+TGRE+IIKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVPK  T  TLTAPFND+ A++
Sbjct:    6 FNTTKSEEIFAAAQKLMPGGVNSPVRAFKSVGGNPIVFDRVEGAYVWDVDGNQYIDYVGSWGPAICGHAHPEVIKALHAALDKGTSFGAPCLLENVLAEMVIDGVPSIEMVRFVNSGTEACMAILRLMRAYTGREKIIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPKSVTANTLTAPFNDLEAVK 195          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_NOSP7 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=hemL PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 5.634e-83
Identity = 149/193 (77.20%), Postives = 170/193 (88.08%), Query Frame = 1
Query:  187 NFTLK--KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            N T+K  KS+E F  A+ LMPGGV+SPVRAFKSVGGQPIVFD VKG+++WD+DGN+YIDYVG+WGPAI GHA  +V+AAL E ++KGTSFGAP  LENVLAEMVI AVPSIEMVRFVNSGTEACMGVLRL RAFT R++IIKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVPK AT  TLTAP+ND+ +++
Sbjct:    3 NTTIKTTKSQEVFAAAQNLMPGGVSSPVRAFKSVGGQPIVFDRVKGAYIWDVDGNQYIDYVGTWGPAICGHAHPEVIAALHEALEKGTSFGAPSTLENVLAEMVIDAVPSIEMVRFVNSGTEACMGVLRLMRAFTNRDKIIKFEGCYHGHADTFLVKAGSGVATLGLPDSPGVPKAATSTTLTAPYNDLESVK 195          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_PROMT (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain NATL2A) GN=hemL PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.639e-82
Identity = 145/187 (77.54%), Postives = 163/187 (87.17%), Query Frame = 1
Query:  199 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            K+SEE F  AK LMPGGV+SPVRAFKSV G PIVFD VKG + WD+DGN YIDYVGSWGPAI GHA  +V+AAL ET++KGTSFGAPC+LEN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++IKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVP+  T  TLTAP+ND+ A++
Sbjct:    8 KRSEEIFGAAKNLMPGGVSSPVRAFKSVEGDPIVFDRVKGPYAWDVDGNRYIDYVGSWGPAICGHAHPEVIAALQETLEKGTSFGAPCVLENQLAEMVIDAVPSVEMVRFVNSGTEACMAVLRLMRAFTGRDKVIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPRSTTANTLTAPYNDLEAVK 194          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_PROM1 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain NATL1A) GN=hemL PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.639e-82
Identity = 145/187 (77.54%), Postives = 163/187 (87.17%), Query Frame = 1
Query:  199 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            K+SEE F  AK LMPGGV+SPVRAFKSV G PIVFD VKG + WD+DGN YIDYVGSWGPAI GHA  +V+AAL ET++KGTSFGAPC+LEN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++IKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVP+  T  TLTAP+ND+ A++
Sbjct:    4 KRSEEIFGAAKNLMPGGVSSPVRAFKSVEGDPIVFDRVKGPYAWDVDGNRYIDYVGSWGPAICGHAHPEVIAALQETLEKGTSFGAPCVLENQLAEMVIDAVPSVEMVRFVNSGTEACMAVLRLMRAFTGRDKVIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPRSTTANTLTAPYNDLEAVK 190          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_CYAP8 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Cyanothece sp. (strain PCC 8801) GN=hemL PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.639e-82
Identity = 147/191 (76.96%), Postives = 167/191 (87.43%), Query Frame = 1
Query:  187 NFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            +F   KSEE F  A++LMPGGV+SPVRAFKSVGGQPIVFD VKG+++WD+DGN+YIDYVG+WGPAI GHA   V+AAL E ++KGTSFGAP + EN+LAEMVI AVPSIEMVRFVNSGTEACM VLRL RAFTGRE+IIKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVPK  T  TLTAP+ND+ A++
Sbjct:    6 SFQTTKSEEIFAAAQKLMPGGVSSPVRAFKSVGGQPIVFDRVKGAYIWDVDGNQYIDYVGTWGPAICGHAHPDVIAALHEALEKGTSFGAPSVQENILAEMVIEAVPSIEMVRFVNSGTEACMSVLRLMRAFTGREKIIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPKATTSFTLTAPYNDLEAVK 196          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_CYAA5 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Cyanothece sp. (strain ATCC 51142) GN=hemL PE=3 SV=2)

HSP 1 Score: 305.064 bits (780), Expect = 2.796e-82
Identity = 144/186 (77.42%), Postives = 167/186 (89.78%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            KSE+ F  A++LMPGGV+SPVRAFKSVGGQPIVFD VKG+++WD+DGN+YIDYVG+WGPAI GHA  +V+AAL + + +GTSFGAPCLLENVLAEMVI AVPSIEMVRFVNSGTEACM VLRL RAFTGR++IIKF+GCYHGHAD FLV+AGSGVATLGLPDSPGVPK  T  TLTAP+ND+ A++
Sbjct:   11 KSEDIFAAAQKLMPGGVSSPVRAFKSVGGQPIVFDHVKGAYIWDVDGNQYIDYVGTWGPAICGHAHPEVIAALHDALDRGTSFGAPCLLENVLAEMVIDAVPSIEMVRFVNSGTEACMSVLRLMRAFTGRDKIIKFQGCYHGHADMFLVQAGSGVATLGLPDSPGVPKTTTANTLTAPYNDLEAVK 196          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_ANAVT (Glutamate-1-semialdehyde 2,1-aminomutase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=hemL PE=3 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.796e-82
Identity = 148/193 (76.68%), Postives = 168/193 (87.05%), Query Frame = 1
Query:  187 NFTLK--KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            N T+K  KS+E F  A+ LMPGGV+SPVRAFKSVGGQPIVFD VKG+++WD+DGN+YIDYVG+WGPAI GHA   V+ AL E ++KGTSFGAP  LENVLAEMVI+AVPSIEMVRFVNSGTEACM VLRL RAFT RE++IKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVPK AT  TLTAP+ND+ A++
Sbjct:    3 NTTIKTTKSQEIFAAAQNLMPGGVSSPVRAFKSVGGQPIVFDHVKGAYIWDVDGNQYIDYVGTWGPAICGHAHPDVIGALHEALEKGTSFGAPSFLENVLAEMVIAAVPSIEMVRFVNSGTEACMAVLRLMRAFTNREKVIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPKSATSSTLTAPYNDLEAVK 195          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_PROM0 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain MIT 9301) GN=hemL PE=3 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.769e-82
Identity = 146/191 (76.44%), Postives = 166/191 (86.91%), Query Frame = 1
Query:  187 NFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            N+T  KSEE F+ A+ELMPGGV+SPVRAFKSVGGQPIVFD VKG   WDIDGN YIDY+GSWGPAI GHA  +V+ AL E ++KGTSFGAPC+LEN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++IKF+GCYHGHAD FLVKAGSGVATLGLPDSPGVP+  T  TLTAP+ND+ A++
Sbjct:    6 NYT--KSEEIFSAAQELMPGGVSSPVRAFKSVGGQPIVFDRVKGPFAWDIDGNRYIDYIGSWGPAICGHAHPEVITALHEAIEKGTSFGAPCVLENKLAEMVIDAVPSVEMVRFVNSGTEACMAVLRLMRAFTGRDKVIKFDGCYHGHADMFLVKAGSGVATLGLPDSPGVPRTTTANTLTAPYNDLEAVK 194          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_ANASP (Glutamate-1-semialdehyde 2,1-aminomutase OS=Anabaena sp. (strain PCC 7120) GN=hemL PE=3 SV=2)

HSP 1 Score: 303.908 bits (777), Expect = 6.229e-82
Identity = 147/193 (76.17%), Postives = 168/193 (87.05%), Query Frame = 1
Query:  187 NFTLK--KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            N T+K  KS+E F  A+ LMPGGV+SPVRAFKSVGGQPIVFD VKG+++WD+DGN+YIDYVG+WGPAI GHA   V+ AL + ++KGTSFGAP  LENVLAEMVI+AVPSIEMVRFVNSGTEACM VLRL RAFT RE++IKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVPK AT  TLTAP+ND+ A++
Sbjct:    3 NTTIKTTKSQEIFAAAQNLMPGGVSSPVRAFKSVGGQPIVFDHVKGAYIWDVDGNQYIDYVGTWGPAICGHAHPDVIGALHDALEKGTSFGAPSFLENVLAEMVIAAVPSIEMVRFVNSGTEACMAVLRLMRAFTNREKVIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPKSATSSTLTAPYNDLEAVK 195          
The following BLAST results are available for this feature:
BLAST of CX070594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_THEEB2.529e-8376.72Glutamate-1-semialdehyde 2,1-aminomutase OS=Thermo... [more]
GSA_CYAP43.303e-8377.37Glutamate-1-semialdehyde 2,1-aminomutase OS=Cyanot... [more]
GSA_NOSP75.634e-8377.20Glutamate-1-semialdehyde 2,1-aminomutase OS=Nostoc... [more]
GSA_PROMT1.639e-8277.54Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_PROM11.639e-8277.54Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_CYAP81.639e-8276.96Glutamate-1-semialdehyde 2,1-aminomutase OS=Cyanot... [more]
GSA_CYAA52.796e-8277.42Glutamate-1-semialdehyde 2,1-aminomutase OS=Cyanot... [more]
GSA_ANAVT2.796e-8276.68Glutamate-1-semialdehyde 2,1-aminomutase OS=Anabae... [more]
GSA_PROM04.769e-8276.44Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_ANASP6.229e-8276.17Glutamate-1-semialdehyde 2,1-aminomutase OS=Anabae... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17G04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17G04-M7-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070594 ID=CX070594; Name=CX070594; organism=Citrus sinensis; type=EST; length=763bp
CATTGACCGAGGAAAAGAGAAAGAGACTTCAGAGAGAGCGACACAAAAAT
GGCAGCTACAATTACAGGGGTAGGAGTTGGGTTAGGGCTTTCATGTTCAT
CAAAGCTCACCAACAGATTTTCTTCTTCTGCTGGATCCTCTCGCTGTAGT
GTTAAAATGTCGGTCTCTGTTGAGGAGCAGAGGAAAAATTTCACTTTAAA
AAAATCTGAAGAAGCTTTCAATGTCGCCAAGGAATTGATGCCTGGAGGTG
TAAATTCACCTGTACGTGCCTTCAAATCTGTTGGTGGTCAACCTATTGTG
TTTGATTCCGTCAAGGGCTCACACATGTGGGATATCGATGGCAATGAGTA
CATTGACTATGTAGGTTCTTGGGGGCCGGCAATTATTGGTCACGCAGATG
ATCAGGTACTAGCAGCCTTGGGTGAAACAATGAAGAAAGGAACAAGCTTT
GGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAGAAATGGTAATCTCAGC
TGTTCCAAGCATAGAAATGGTTCGTTTTGTTAACTCAGGCACAGAAGCAT
GCATGGGTGTGCTTCGCCTTGCCCGTGCCTTCACTGGGAGAGAGAGGATC
ATCAAATTTGAGGGTTGTTATCATGGCCATGCTGATCCATTTCTTGTCAA
GGCTGGTAGTGGAGTTGCCACCCTAGGGCTTCCCGACTCCCCTGGTGTTC
CTAAAGGAGCCACCTATGAAACTTTGACAGCCCCCTTCAATGATGTCTCG
GCTTTGGAAAATC
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