CX070594

Overview
NameCX070594
Unique NameCX070594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_PROM9 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain MIT 9312) GN=hemL PE=3 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.388e-81
Identity = 144/186 (77.42%), Postives = 162/186 (87.10%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            KSEE F+ A+ELMPGGV+SPVRAFKSVGGQPIVFD VKG   WDIDGN YIDY+GSWGPAI GHA  +V  AL E ++KGTSFGAPC+LEN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++IKF+GCYHGHAD FLVKAGSGVATLGLPDSPGVP+  T  TLTAP+ND+ A++
Sbjct:    9 KSEEIFSAAQELMPGGVSSPVRAFKSVGGQPIVFDRVKGPFAWDIDGNRYIDYIGSWGPAICGHAHPEVTTALQEAIEKGTSFGAPCVLENKLAEMVIDAVPSVEMVRFVNSGTEACMAVLRLMRAFTGRDKVIKFDGCYHGHADMFLVKAGSGVATLGLPDSPGVPRTTTANTLTAPYNDLEAVK 194          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_SYNY3 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechocystis sp. (strain PCC 6803) GN=hemL PE=3 SV=2)

HSP 1 Score: 301.982 bits (772), Expect = 2.367e-81
Identity = 145/190 (76.32%), Postives = 162/190 (85.26%), Query Frame = 1
Query:  190 FTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            F   KSEE F  A+ LMPGGV+SPVRAFKSVGGQPIVFD V+G+ +WD+DGN+YIDYVG+WGPAI GHA   V++AL + + KGTSFGAPC  ENVLAEMVI AVPSIEMVRFVNSGTEACM VLRL RAFTGRE+IIKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVP   T  TLTAP+ND+ A++
Sbjct:    7 FITTKSEEIFAAAQHLMPGGVSSPVRAFKSVGGQPIVFDRVEGAQIWDVDGNQYIDYVGTWGPAICGHAHPDVISALKQALDKGTSFGAPCAQENVLAEMVIDAVPSIEMVRFVNSGTEACMSVLRLMRAFTGREKIIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPSNTTKATLTAPYNDLEAVK 196          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_PROMS (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain AS9601) GN=hemL PE=3 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.367e-81
Identity = 145/191 (75.92%), Postives = 165/191 (86.39%), Query Frame = 1
Query:  187 NFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            N+T  KSEE F+ A++LMPGGV+SPVRAFKSVGGQPIVFD VKG   WDIDGN YIDY+GSWGPAI GHA  +V  AL E ++KGTSFGAPC+LEN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++IKF+GCYHGHAD FLVKAGSGVATLGLPDSPGVP+  T  TLTAP+ND+ A++
Sbjct:    6 NYT--KSEEIFSAAQQLMPGGVSSPVRAFKSVGGQPIVFDRVKGPFAWDIDGNRYIDYIGSWGPAICGHAHPEVTTALQEAIEKGTSFGAPCVLENKLAEMVIDAVPSVEMVRFVNSGTEACMAVLRLMRAFTGRDKVIKFDGCYHGHADMFLVKAGSGVATLGLPDSPGVPRTTTANTLTAPYNDLEAVK 194          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_MICAN (Glutamate-1-semialdehyde 2,1-aminomutase OS=Microcystis aeruginosa (strain NIES-843) GN=hemL PE=3 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.367e-81
Identity = 144/191 (75.39%), Postives = 168/191 (87.96%), Query Frame = 1
Query:  187 NFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            ++   KS+E F  A++LMPGGV+SPVRAFKSVGGQPIVF+SVKG+++ D+DGNEYIDYVG+WGPAI GHA  +V+AAL + + KGTSFGAPC+ EN+LAEMVI AVPSIEMVRFVNSGTEACM VLRL RAFTGR++IIKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVPK  T  TLTAP+ND+ A++
Sbjct:    6 SYQTTKSKEIFTAAQKLMPGGVSSPVRAFKSVGGQPIVFESVKGAYIRDVDGNEYIDYVGTWGPAICGHAHPEVIAALHDALDKGTSFGAPCVQENILAEMVIDAVPSIEMVRFVNSGTEACMSVLRLMRAFTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPKTTTNNTLTAPYNDLEAVK 196          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_SYNS3 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain CC9311) GN=hemL PE=3 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 3.091e-81
Identity = 141/191 (73.82%), Postives = 163/191 (85.34%), Query Frame = 1
Query:  187 NFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            N     SE  F+ AK LMPGGV+SPVRAFKSVGGQPIVFD VKG + WD+DGN+Y+DY+GSWGPAI GHA  +V++AL E ++KGTSFGAPC LEN LAEMVI AVPS+EMVRFVNSGTEACM +LRL RAFTGR++IIKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVP+  T  TLTAP+ND+ +++
Sbjct:   10 NLNTSHSEAIFSAAKALMPGGVSSPVRAFKSVGGQPIVFDRVKGPYAWDVDGNKYVDYIGSWGPAICGHAHPEVISALQEAIEKGTSFGAPCALENTLAEMVIEAVPSVEMVRFVNSGTEACMSMLRLIRAFTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPRSTTANTLTAPYNDLESVK 200          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_PROMP (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=hemL PE=3 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 3.091e-81
Identity = 143/185 (77.30%), Postives = 162/185 (87.57%), Query Frame = 1
Query:  205 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            SEE F+ A ELMPGGV+SPVRAFKSVGGQPIVFD VKG + WDIDGN YIDY+GSWGPAI GHA  +V+ AL E ++KGTSFGAPC+LEN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++IKF+GCYHGHAD FLVKAGSGVATLGLPDSPGVP+  T  TLTAP+ND+ A++
Sbjct:   10 SEEVFSSALELMPGGVSSPVRAFKSVGGQPIVFDRVKGPYAWDIDGNRYIDYIGSWGPAICGHAHPEVITALQEAIEKGTSFGAPCVLENKLAEMVIDAVPSVEMVRFVNSGTEACMAVLRLMRAFTGRDKVIKFDGCYHGHADMFLVKAGSGVATLGLPDSPGVPRTTTANTLTAPYNDLEAVK 194          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_PROM2 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain MIT 9215) GN=hemL PE=3 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 3.091e-81
Identity = 143/186 (76.88%), Postives = 162/186 (87.10%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            KSEE F+ A++LMPGGV+SPVRAFKSVGGQPIVFD VKG   WDIDGN YIDY+GSWGPAI GHA  +V  AL E ++KGTSFGAPC+LEN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++IKF+GCYHGHAD FLVKAGSGVATLGLPDSPGVP+  T  TLTAP+ND+ A++
Sbjct:    9 KSEEIFSAAQQLMPGGVSSPVRAFKSVGGQPIVFDRVKGPFAWDIDGNRYIDYIGSWGPAICGHAHPEVTTALQEAIEKGTSFGAPCVLENKLAEMVIDAVPSVEMVRFVNSGTEACMAVLRLMRAFTGRDKVIKFDGCYHGHADMFLVKAGSGVATLGLPDSPGVPRTTTANTLTAPYNDLEAVK 194          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_SYNP6 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hemL PE=1 SV=4)

HSP 1 Score: 301.212 bits (770), Expect = 4.038e-81
Identity = 145/190 (76.32%), Postives = 163/190 (85.79%), Query Frame = 1
Query:  190 FTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            F   KS+E F  A++LMPGGV+SPVRAFKSVGGQPIVFD VK ++ WD+DGN YIDYVG+WGPAI GHA  +V+ AL   M+KGTSFGAPC LENVLAEMVI AVPSIEMVRFVNSGTEACM VLRL RA+TGR++IIKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVPK  T  TLTAP+ND+ A++
Sbjct:    7 FKTIKSDEIFAAAQKLMPGGVSSPVRAFKSVGGQPIVFDRVKDAYAWDVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVIDAVPSIEMVRFVNSGTEACMAVLRLMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPKSTTANTLTAPYNDLEAVK 196          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_SYNE7 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus elongatus (strain PCC 7942) GN=hemL PE=1 SV=3)

HSP 1 Score: 301.212 bits (770), Expect = 4.038e-81
Identity = 145/190 (76.32%), Postives = 163/190 (85.79%), Query Frame = 1
Query:  190 FTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            F   KS+E F  A++LMPGGV+SPVRAFKSVGGQPIVFD VK ++ WD+DGN YIDYVG+WGPAI GHA  +V+ AL   M+KGTSFGAPC LENVLAEMVI AVPSIEMVRFVNSGTEACM VLRL RA+TGR++IIKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVPK  T  TLTAP+ND+ A++
Sbjct:    7 FKTIKSDEIFAAAQKLMPGGVSSPVRAFKSVGGQPIVFDRVKDAYAWDVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVIDAVPSIEMVRFVNSGTEACMAVLRLMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPKSTTANTLTAPYNDLEAVK 196          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_SYNPW (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain WH7803) GN=hemL PE=3 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 5.273e-81
Identity = 139/186 (74.73%), Postives = 164/186 (88.17%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            +S+E F+ A+ LMPGGV+SPVRAF+SVGGQP+VFD VKG + WD+DGN+YIDY+GSWGPAI GHA  +V++AL E ++KGTSFGAPC LEN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++IKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVP+  T  TLTAP+ND+ A++
Sbjct:   10 RSQELFSAAQALMPGGVSSPVRAFRSVGGQPLVFDRVKGPYAWDVDGNKYIDYIGSWGPAICGHAHPEVISALQEAIEKGTSFGAPCALENTLAEMVIDAVPSVEMVRFVNSGTEACMAVLRLMRAFTGRDKVIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPRSTTANTLTAPYNDLEAVK 195          
The following BLAST results are available for this feature:
BLAST of CX070594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_PROM91.388e-8177.42Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_SYNY32.367e-8176.32Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_PROMS2.367e-8175.92Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_MICAN2.367e-8175.39Glutamate-1-semialdehyde 2,1-aminomutase OS=Microc... [more]
GSA_SYNS33.091e-8173.82Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_PROMP3.091e-8177.30Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_PROM23.091e-8176.88Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_SYNP64.038e-8176.32Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_SYNE74.038e-8176.32Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_SYNPW5.273e-8174.73Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17G04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17G04-M7-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070594 ID=CX070594; Name=CX070594; organism=Citrus sinensis; type=EST; length=763bp
CATTGACCGAGGAAAAGAGAAAGAGACTTCAGAGAGAGCGACACAAAAAT
GGCAGCTACAATTACAGGGGTAGGAGTTGGGTTAGGGCTTTCATGTTCAT
CAAAGCTCACCAACAGATTTTCTTCTTCTGCTGGATCCTCTCGCTGTAGT
GTTAAAATGTCGGTCTCTGTTGAGGAGCAGAGGAAAAATTTCACTTTAAA
AAAATCTGAAGAAGCTTTCAATGTCGCCAAGGAATTGATGCCTGGAGGTG
TAAATTCACCTGTACGTGCCTTCAAATCTGTTGGTGGTCAACCTATTGTG
TTTGATTCCGTCAAGGGCTCACACATGTGGGATATCGATGGCAATGAGTA
CATTGACTATGTAGGTTCTTGGGGGCCGGCAATTATTGGTCACGCAGATG
ATCAGGTACTAGCAGCCTTGGGTGAAACAATGAAGAAAGGAACAAGCTTT
GGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAGAAATGGTAATCTCAGC
TGTTCCAAGCATAGAAATGGTTCGTTTTGTTAACTCAGGCACAGAAGCAT
GCATGGGTGTGCTTCGCCTTGCCCGTGCCTTCACTGGGAGAGAGAGGATC
ATCAAATTTGAGGGTTGTTATCATGGCCATGCTGATCCATTTCTTGTCAA
GGCTGGTAGTGGAGTTGCCACCCTAGGGCTTCCCGACTCCCCTGGTGTTC
CTAAAGGAGCCACCTATGAAACTTTGACAGCCCCCTTCAATGATGTCTCG
GCTTTGGAAAATC
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