CX070594

Overview
NameCX070594
Unique NameCX070594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_CYAP7 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Cyanothece sp. (strain PCC 7424) GN=hemL PE=3 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 6.887e-81
Identity = 142/191 (74.35%), Postives = 165/191 (86.39%), Query Frame = 1
Query:  187 NFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            +F   KSEE F  A++LMPGGV+SPVRAFKSVGGQPIVFD V+G+++WD+D N+YIDYVG+WGPAI GHA   V++AL + + KGTSFGAPC+ EN+LAEMVI AVPSIEMVRFVNSGTEACM VLRL RA+T RE+IIKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVPK  T  TLTAP+ND+ A++
Sbjct:    6 SFKTTKSEEIFTAAQKLMPGGVSSPVRAFKSVGGQPIVFDHVEGAYIWDVDNNQYIDYVGTWGPAICGHAHPDVISALHKALDKGTSFGAPCMQENILAEMVIDAVPSIEMVRFVNSGTEACMSVLRLMRAYTNREKIIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPKTTTSNTLTAPYNDLEAVK 196          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_TRIEI (Glutamate-1-semialdehyde 2,1-aminomutase OS=Trichodesmium erythraeum (strain IMS101) GN=hemL PE=3 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 8.995e-81
Identity = 141/186 (75.81%), Postives = 163/186 (87.63%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            KSEE F  A++LMPGGV+SPVRAFKSVGGQPIVFD V+G+++WD+DGN+YIDYVG+WGPAI GHA  +VL  L E ++KGTSFGAPC LEN LA+MVI AVPSIEM+RFVNSGTEACM VLRL RAFTGR+++IKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVPK  T  TLTAP+ND+  ++
Sbjct:   10 KSEEIFAAAQKLMPGGVSSPVRAFKSVGGQPIVFDRVQGAYIWDVDGNQYIDYVGTWGPAICGHAHPEVLNGLKEVLEKGTSFGAPCALENTLAKMVIDAVPSIEMIRFVNSGTEACMAVLRLMRAFTGRDKVIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPKHVTKNTLTAPYNDLETVK 195          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_SYNS9 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain CC9902) GN=hemL PE=3 SV=2)

HSP 1 Score: 299.671 bits (766), Expect = 1.175e-80
Identity = 140/186 (75.27%), Postives = 162/186 (87.10%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            +S+  F  A+ LMPGGV+SPVRAFKSVGGQPIVFD VKG + WD+DGN+YIDY+GSWGPAI GHA  +V++AL E ++KGTSFGAPC LEN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++IKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVP+  T  TLTAP+ND+ A++
Sbjct:    5 RSQAIFGAAQGLMPGGVSSPVRAFKSVGGQPIVFDRVKGPYAWDVDGNKYIDYIGSWGPAICGHAHPEVISALQEAIEKGTSFGAPCALENTLAEMVIDAVPSVEMVRFVNSGTEACMAVLRLMRAFTGRDKVIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPRSTTANTLTAPYNDLEAVK 190          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_SYNPX (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain WH8102) GN=hemL PE=3 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.175e-80
Identity = 140/186 (75.27%), Postives = 162/186 (87.10%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            +S+  F  A+ LMPGGV+SPVRAFKSVGGQPIVFD VKG + WD+DGN+YIDY+GSWGPAI GHA  +V++AL E ++KGTSFGAPC LEN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++IKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVP+  T  TLTAP+ND+ A++
Sbjct:    5 RSQAIFGAAQGLMPGGVSSPVRAFKSVGGQPIVFDRVKGPYAWDVDGNKYIDYIGSWGPAICGHAHPEVISALQEAIEKGTSFGAPCALENTLAEMVIDAVPSVEMVRFVNSGTEACMAVLRLMRAFTGRDKVIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPRSTTANTLTAPYNDLEAVK 190          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_SYNSC (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain CC9605) GN=hemL PE=3 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.534e-80
Identity = 140/185 (75.68%), Postives = 161/185 (87.03%), Query Frame = 1
Query:  205 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            S+  F  A+ LMPGGV+SPVRAFKSVGGQPIVFD VKG + WD+DGN+YIDY+GSWGPAI GHA  +V+AAL E ++KGTSFGAPC LEN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RA+TGR+++IKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVP+  T  TLTAP+ND+ A++
Sbjct:    6 SQAIFGAAQALMPGGVSSPVRAFKSVGGQPIVFDRVKGPYAWDVDGNKYIDYIGSWGPAICGHAHPEVIAALQEAIEKGTSFGAPCALENTLAEMVIDAVPSVEMVRFVNSGTEACMAVLRLIRAYTGRDKVIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPRSTTANTLTAPYNDLEAVK 190          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_SYNR3 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain RCC307) GN=hemL PE=3 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 2.004e-80
Identity = 138/186 (74.19%), Postives = 162/186 (87.10%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            +S+  F  A++LMPGGVNSPVRAF+SVGGQPIVFD V+G++ WD+DGN YIDY+GSWGPAI GHA+ +V+ AL + + KGTSFGAPC LEN LAEMVI+AVPS+EMVRFVNSGTEACM VLRL RA+TGRE++IKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVP   T  TLTAP+ND+ A++
Sbjct:   11 RSDALFTAAQQLMPGGVNSPVRAFRSVGGQPIVFDRVEGAYAWDVDGNRYIDYIGSWGPAICGHANPEVIEALQQALTKGTSFGAPCALENTLAEMVINAVPSVEMVRFVNSGTEACMAVLRLMRAYTGREKVIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPSSTTANTLTAPYNDLEAVK 196          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_PROMA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus GN=hemL PE=3 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 2.617e-80
Identity = 140/191 (73.30%), Postives = 163/191 (85.34%), Query Frame = 1
Query:  190 FTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN 762
            F    S+  F+ A+ELMPGGV+SPVRAFKSV G PIVFD VKG++ WD+DGN +IDYVGSWGPAI GH+  +V+A+L E ++KGTSFGAPC LEN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++IKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVP+  T  TLTAP+ND+ A++N
Sbjct:    5 FNTSNSQAVFHAAQELMPGGVSSPVRAFKSVNGDPIVFDRVKGAYAWDLDGNRFIDYVGSWGPAICGHSHPEVIASLQEALEKGTSFGAPCELENKLAEMVIEAVPSVEMVRFVNSGTEACMAVLRLMRAFTGRDKLIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPRSTTSNTLTAPYNDLEAVKN 195          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_PROM5 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain MIT 9515) GN=hemL PE=3 SV=2)

HSP 1 Score: 298.516 bits (763), Expect = 2.617e-80
Identity = 141/190 (74.21%), Postives = 162/190 (85.26%), Query Frame = 1
Query:  190 FTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            F +  SEE F+ A +LMPGGV+SPVRAFKSVGGQPIVFD VKG   WD+DGN YIDY+GSWGPAI GHA  +V+ AL E ++KGTSFGAPC+ EN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++IKF+GCYHGHAD FLVKAGSGVATLGLPDSPGVP+  T  TLTAP+ND+ A++
Sbjct:    5 FNITHSEEVFSSALKLMPGGVSSPVRAFKSVGGQPIVFDRVKGPFAWDVDGNRYIDYIGSWGPAICGHAHPEVITALQEAIEKGTSFGAPCVQENKLAEMVIDAVPSVEMVRFVNSGTEACMAVLRLMRAFTGRDKVIKFDGCYHGHADMFLVKAGSGVATLGLPDSPGVPRTTTANTLTAPYNDLEAVK 194          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_SYNJB (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. GN=hemL PE=3 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 4.464e-80
Identity = 138/191 (72.25%), Postives = 164/191 (85.86%), Query Frame = 1
Query:  187 NFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            +F   +S++ F  A+ LMPGGV+SPVRAFKSVGG P+VFD V G++ WD+DGN+YIDY+GSWGPAI+GHA  +V+ AL   ++KGTSFGAPC+LEN LAE VI AVPS+EMVRFVNSGTEACM VLRL RA+TGRE++IKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVPK AT  TLTAP+ND+ A++
Sbjct:    9 SFNTTRSKQVFARAQSLMPGGVSSPVRAFKSVGGDPVVFDRVSGAYAWDVDGNQYIDYIGSWGPAIVGHAHPEVIEALRRALEKGTSFGAPCVLENELAERVIEAVPSVEMVRFVNSGTEACMAVLRLMRAYTGREKVIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVK 199          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_SYNJA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain JA-3-3Ab) GN=hemL PE=3 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 7.615e-80
Identity = 137/192 (71.35%), Postives = 164/192 (85.42%), Query Frame = 1
Query:  184 KNFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            ++F   +S + F  A++LMPGGV+SPVRAFKSVGG P+VFD V G++ WD+DGN+YIDY+GSWGPAI+GHA  +V+ AL   ++KGTSFGAPC+LEN LAE VI AVPS+EMVRFVNSGTEACM  LRL RA+TGRE++IKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVPK AT  TLTAP+ND+ A++
Sbjct:    8 RSFNTSRSRQIFARAQQLMPGGVSSPVRAFKSVGGDPVVFDRVAGAYAWDVDGNQYIDYIGSWGPAIVGHAHPEVIEALRRALEKGTSFGAPCVLENELAERVIEAVPSVEMVRFVNSGTEACMAALRLMRAYTGREKVIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVK 199          
The following BLAST results are available for this feature:
BLAST of CX070594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_CYAP76.887e-8174.35Glutamate-1-semialdehyde 2,1-aminomutase OS=Cyanot... [more]
GSA_TRIEI8.995e-8175.81Glutamate-1-semialdehyde 2,1-aminomutase OS=Tricho... [more]
GSA_SYNS91.175e-8075.27Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_SYNPX1.175e-8075.27Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_SYNSC1.534e-8075.68Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_SYNR32.004e-8074.19Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_PROMA2.617e-8073.30Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_PROM52.617e-8074.21Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_SYNJB4.464e-8072.25Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_SYNJA7.615e-8071.35Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17G04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17G04-M7-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070594 ID=CX070594; Name=CX070594; organism=Citrus sinensis; type=EST; length=763bp
CATTGACCGAGGAAAAGAGAAAGAGACTTCAGAGAGAGCGACACAAAAAT
GGCAGCTACAATTACAGGGGTAGGAGTTGGGTTAGGGCTTTCATGTTCAT
CAAAGCTCACCAACAGATTTTCTTCTTCTGCTGGATCCTCTCGCTGTAGT
GTTAAAATGTCGGTCTCTGTTGAGGAGCAGAGGAAAAATTTCACTTTAAA
AAAATCTGAAGAAGCTTTCAATGTCGCCAAGGAATTGATGCCTGGAGGTG
TAAATTCACCTGTACGTGCCTTCAAATCTGTTGGTGGTCAACCTATTGTG
TTTGATTCCGTCAAGGGCTCACACATGTGGGATATCGATGGCAATGAGTA
CATTGACTATGTAGGTTCTTGGGGGCCGGCAATTATTGGTCACGCAGATG
ATCAGGTACTAGCAGCCTTGGGTGAAACAATGAAGAAAGGAACAAGCTTT
GGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAGAAATGGTAATCTCAGC
TGTTCCAAGCATAGAAATGGTTCGTTTTGTTAACTCAGGCACAGAAGCAT
GCATGGGTGTGCTTCGCCTTGCCCGTGCCTTCACTGGGAGAGAGAGGATC
ATCAAATTTGAGGGTTGTTATCATGGCCATGCTGATCCATTTCTTGTCAA
GGCTGGTAGTGGAGTTGCCACCCTAGGGCTTCCCGACTCCCCTGGTGTTC
CTAAAGGAGCCACCTATGAAACTTTGACAGCCCCCTTCAATGATGTCTCG
GCTTTGGAAAATC
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