CX070594

Overview
NameCX070594
Unique NameCX070594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_PROM3 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain MIT 9303) GN=hemL PE=3 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 7.615e-80
Identity = 138/186 (74.19%), Postives = 163/186 (87.63%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            +S+  F+ A+ LMPGGV+SPVRAF+SVGGQPIVFD VKG++ WD+DGN +IDY+GSWGPAI GHA  +V+AAL + ++KGTSFGAPC LEN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++IKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVP+  T  TLTAP+ND+ A++
Sbjct:    5 RSQAIFSAAQRLMPGGVSSPVRAFRSVGGQPIVFDRVKGAYAWDVDGNRFIDYIGSWGPAICGHAHPEVIAALQDALEKGTSFGAPCELENQLAEMVIDAVPSVEMVRFVNSGTEACMSVLRLMRAFTGRDKLIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPRSTTSNTLTAPYNDLEAVK 190          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_PROMM (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain MIT 9313) GN=hemL PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.216e-79
Identity = 137/186 (73.66%), Postives = 162/186 (87.10%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            +S+  F+ A+ LMPGGV+SPVRAF+SVGGQPIVFD VKG++ WD+DGN +IDY+GSWGPAI GHA  +V+ AL + ++KGTSFGAPC LEN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++IKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVP+  T  TLTAP+ND+ A++
Sbjct:    5 RSQAIFSAAQRLMPGGVSSPVRAFRSVGGQPIVFDRVKGAYAWDVDGNRFIDYIGSWGPAICGHAHPEVIVALQDALEKGTSFGAPCELENQLAEMVIDAVPSVEMVRFVNSGTEACMSVLRLMRAFTGRDKLIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPRSTTSNTLTAPYNDLEAVK 190          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_PROM4 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain MIT 9211) GN=hemL PE=3 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 6.446e-79
Identity = 139/190 (73.16%), Postives = 160/190 (84.21%), Query Frame = 1
Query:  190 FTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            F    S+  FN A++LMPGGV+SPVRAFKSV G PIVFD VKG + WD+DGN +IDYVGSWGPAI GH+  +V+AAL E ++KGTSFGAPC LEN LA MVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++IKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVP+  T  TLTAP+ND+ A++
Sbjct:    5 FNTNLSQAVFNAAQDLMPGGVSSPVRAFKSVNGDPIVFDRVKGPYAWDLDGNRFIDYVGSWGPAICGHSHPEVIAALQEALEKGTSFGAPCELENKLAGMVIEAVPSVEMVRFVNSGTEACMAVLRLMRAFTGRDKLIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPRSTTSNTLTAPYNDLEAVK 194          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_CHLRE (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Chlamydomonas reinhardtii GN=GSA PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.941e-75
Identity = 133/186 (71.51%), Postives = 157/186 (84.41%), Query Frame = 1
Query:  199 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 756
            K+SEE F  A+EL+PGGVNSPVRAF+SVGG PIVFD VKG++ WD+DGN+YIDYVGSWGPAI GH +D+V  AL   + KGTSFGAPC LENVLA+MVI  VPS+EMVRFV+SGTEAC+ VLRL RA+TGRE+++KF GCYHGHAD FLVKAGSGV TLGLPDSPGVPK     TLTA +N++ ++
Sbjct:   40 KRSEEIFKEAQELLPGGVNSPVRAFRSVGGGPIVFDRVKGAYCWDVDGNKYIDYVGSWGPAICGHGNDEVNNALKAQIDKGTSFGAPCELENVLAKMVIDRVPSVEMVRFVSSGTEACLSVLRLMRAYTGREKVLKFTGCYHGHADSFLVKAGSGVITLGLPDSPGVPKSTAAATLTATYNNLDSV 225          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_GLOVI (Glutamate-1-semialdehyde 2,1-aminomutase OS=Gloeobacter violaceus GN=hemL PE=3 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.221e-71
Identity = 123/190 (64.74%), Postives = 155/190 (81.58%), Query Frame = 1
Query:  190 FTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            F   +S   F  A++LMPGGVNSPVRAFKSVG +P+  +  +G+++WD+DGN YI+Y+ +WGP+I+GH+  +V++AL E + KGTS+GAP  LEN +A  VI A+P++EMVRFVNSGTEA M  LRLARAFTGRE+IIKFEGCYHGHAD  LV+AGSGVATLGLPDSPGVPK  T  TLTAP+ND++A+E
Sbjct:    6 FQTAQSHRLFAEAQQLMPGGVNSPVRAFKSVGSEPVFIERAEGAYLWDVDGNRYIEYINTWGPSIVGHSHPEVISALREALPKGTSYGAPTRLENQMARTVIDAIPAVEMVRFVNSGTEATMSALRLARAFTGREKIIKFEGCYHGHADMLLVQAGSGVATLGLPDSPGVPKSTTAATLTAPYNDLAAVE 195          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA2_BACHD (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Bacillus halodurans GN=hemL2 PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.545e-69
Identity = 127/188 (67.55%), Postives = 148/188 (78.72%), Query Frame = 1
Query:  193 TLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 756
            T +KS  AFN AK LMPGGVNSPVRAFKSV   P+  +  KG++++DIDGNEYIDYV SWGP I+GHADDQV+  L ET +KGTSFGAP  LE  LAE+VI  VPSIE+VR VNSGTEA M  LRLAR +TGR +I+KFEGCYHGH D  L+KAGSGVATLGLPDSPGVP+     TLT P+ND+ ++
Sbjct:    3 TFEKSSAAFNRAKPLMPGGVNSPVRAFKSVNMDPVFMERGKGANIYDIDGNEYIDYVLSWGPLILGHADDQVVEKLKETTEKGTSFGAPSELETKLAELVIERVPSIEVVRMVNSGTEATMSALRLARGYTGRNKILKFEGCYHGHGDSLLIKAGSGVATLGLPDSPGVPETVAQNTLTVPYNDLESV 190          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_HERA2 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=hemL PE=3 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.945e-67
Identity = 126/185 (68.11%), Postives = 150/185 (81.08%), Query Frame = 1
Query:  205 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            S  AF  A+ L+PGGVNSPVRAF+ VGG P   D   G++++DIDGN+YIDYV SWGP I+GHA   V+ A+    ++GTSFGAP  LE+ LAE+VI+AVPS+EMVRFV+SGTEA M  +RLARA+T RE+IIKFEGCYHGHADPFLV+AGSGVATLGLPDSPGV K AT  TLTAPFND+ A+E
Sbjct:    6 SSAAFERAQALLPGGVNSPVRAFRGVGGVPRFIDHGAGAYLYDIDGNQYIDYVLSWGPLILGHAYPAVVEAICAQAQRGTSFGAPTELESELAELVIAAVPSVEMVRFVSSGTEAAMSAIRLARAYTQREKIIKFEGCYHGHADPFLVQAGSGVATLGLPDSPGVLKSATSNTLTAPFNDLEAVE 190          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA1_STAAW (Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Staphylococcus aureus (strain MW2) GN=hemL1 PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.334e-67
Identity = 125/186 (67.20%), Postives = 146/186 (78.49%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            KSEEA  VA+ LMPGGVNSPVRAFKSV    I  D  KGS ++DIDGNEYIDYV SWGP I+GH D QV++ L E + KGTSFGA  LLEN LA++VI  VPSIE VR V+SGTEA +  LRLAR +TGR +I+KFEGCYHGH+D  L+KAGSGVATLGLPDSPGVP+G    T+T P+ND+ AL+
Sbjct:    5 KSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMDHGKGSKIYDIDGNEYIDYVLSWGPLILGHRDPQVISHLHEAIDKGTSFGASTLLENKLAQLVIDRVPSIEKVRMVSSGTEATLDTLRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGIAKNTITVPYNDLDALK 190          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA1_STAAU (Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Staphylococcus aureus GN=hemL1 PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.334e-67
Identity = 125/186 (67.20%), Postives = 146/186 (78.49%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            KSEEA  VA+ LMPGGVNSPVRAFKSV    I  D  KGS ++DIDGNEYIDYV SWGP I+GH D QV++ L E + KGTSFGA  LLEN LA++VI  VPSIE VR V+SGTEA +  LRLAR +TGR +I+KFEGCYHGH+D  L+KAGSGVATLGLPDSPGVP+G    T+T P+ND+ AL+
Sbjct:    5 KSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMDHGKGSKIYDIDGNEYIDYVLSWGPLILGHRDPQVISHLHEAIDKGTSFGASTLLENKLAQLVIDRVPSIEKVRMVSSGTEATLDTLRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGIAKNTITVPYNDLDALK 190          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA1_STAAT (Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=hemL1 PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.334e-67
Identity = 125/186 (67.20%), Postives = 146/186 (78.49%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            KSEEA  VA+ LMPGGVNSPVRAFKSV    I  D  KGS ++DIDGNEYIDYV SWGP I+GH D QV++ L E + KGTSFGA  LLEN LA++VI  VPSIE VR V+SGTEA +  LRLAR +TGR +I+KFEGCYHGH+D  L+KAGSGVATLGLPDSPGVP+G    T+T P+ND+ AL+
Sbjct:    5 KSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMDHGKGSKIYDIDGNEYIDYVLSWGPLILGHRDPQVISHLHEAIDKGTSFGASTLLENKLAQLVIDRVPSIEKVRMVSSGTEATLDTLRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGIAKNTITVPYNDLDALK 190          
The following BLAST results are available for this feature:
BLAST of CX070594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_PROM37.615e-8074.19Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_PROMM2.216e-7973.66Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_PROM46.446e-7973.16Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_CHLRE1.941e-7571.51Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA_GLOVI2.221e-7164.74Glutamate-1-semialdehyde 2,1-aminomutase OS=Gloeob... [more]
GSA2_BACHD3.545e-6967.55Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Baci... [more]
GSA_HERA21.945e-6768.11Glutamate-1-semialdehyde 2,1-aminomutase OS=Herpet... [more]
GSA1_STAAW4.334e-6767.20Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Stap... [more]
GSA1_STAAU4.334e-6767.20Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Stap... [more]
GSA1_STAAT4.334e-6767.20Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17G04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17G04-M7-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070594 ID=CX070594; Name=CX070594; organism=Citrus sinensis; type=EST; length=763bp
CATTGACCGAGGAAAAGAGAAAGAGACTTCAGAGAGAGCGACACAAAAAT
GGCAGCTACAATTACAGGGGTAGGAGTTGGGTTAGGGCTTTCATGTTCAT
CAAAGCTCACCAACAGATTTTCTTCTTCTGCTGGATCCTCTCGCTGTAGT
GTTAAAATGTCGGTCTCTGTTGAGGAGCAGAGGAAAAATTTCACTTTAAA
AAAATCTGAAGAAGCTTTCAATGTCGCCAAGGAATTGATGCCTGGAGGTG
TAAATTCACCTGTACGTGCCTTCAAATCTGTTGGTGGTCAACCTATTGTG
TTTGATTCCGTCAAGGGCTCACACATGTGGGATATCGATGGCAATGAGTA
CATTGACTATGTAGGTTCTTGGGGGCCGGCAATTATTGGTCACGCAGATG
ATCAGGTACTAGCAGCCTTGGGTGAAACAATGAAGAAAGGAACAAGCTTT
GGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAGAAATGGTAATCTCAGC
TGTTCCAAGCATAGAAATGGTTCGTTTTGTTAACTCAGGCACAGAAGCAT
GCATGGGTGTGCTTCGCCTTGCCCGTGCCTTCACTGGGAGAGAGAGGATC
ATCAAATTTGAGGGTTGTTATCATGGCCATGCTGATCCATTTCTTGTCAA
GGCTGGTAGTGGAGTTGCCACCCTAGGGCTTCCCGACTCCCCTGGTGTTC
CTAAAGGAGCCACCTATGAAACTTTGACAGCCCCCTTCAATGATGTCTCG
GCTTTGGAAAATC
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