CX070594

Overview
NameCX070594
Unique NameCX070594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA1_BACCR (Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=hemL1 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.161e-50
Identity = 98/192 (51.04%), Postives = 131/192 (68.23%), Query Frame = 1
Query:  187 NFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGG-QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            NFT  KSE     A E + GGVNSP R+FK+VGG  P+  +  KG++ WD+DGN+YIDY+ ++GP I GHA   +  A+    + G  +G P  LE   A+M+  A+P+++ VRFVNSGTEA M  +R+ARA+TGR +I+KF GCYHGH+D  LV AGSG +TLG PDS GVP+    E +T PFN+V  L+
Sbjct:    2 NFT--KSEALHKEALEHIVGGVNSPSRSFKAVGGGAPVAMERGKGAYFWDVDGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGTPTALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLK 191          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA1_BACC4 (Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus cereus (strain B4264) GN=hemL1 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.161e-50
Identity = 98/192 (51.04%), Postives = 131/192 (68.23%), Query Frame = 1
Query:  187 NFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGG-QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            NFT  KSE     A E + GGVNSP R+FK+VGG  P+  +  KG++ WD+DGN+YIDY+ ++GP I GHA   +  A+    + G  +G P  LE   A+M+  A+P+++ VRFVNSGTEA M  +R+ARA+TGR +I+KF GCYHGH+D  LV AGSG +TLG PDS GVP+    E +T PFN+V  L+
Sbjct:    2 NFT--KSEALHKEALEHIVGGVNSPSRSFKAVGGGAPVAMERGKGAYFWDVDGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGTPTALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLK 191          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_VEREI (Glutamate-1-semialdehyde 2,1-aminomutase OS=Verminephrobacter eiseniae (strain EF01-2) GN=hemL PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.822e-50
Identity = 96/181 (53.04%), Postives = 121/181 (66.85%), Query Frame = 1
Query:  217 FNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            F  AK L+PGGVNSPVRAFK+VGG P      +G++ WD +   +IDY+GSWGP I+GH    VL A+ +   +G SFGAP   E  LAE ++  +PS++M+R V+SGTEA M  +RLAR  TGR ++IKFEGCYHGHAD  LVKAGSG+AT G   S GVP      TL   +N +  LE
Sbjct:   12 FERAKALIPGGVNSPVRAFKAVGGTPRFVKRARGAYFWDANDQRFIDYIGSWGPMILGHGHPAVLEAVQQAALEGLSFGAPTERELELAEAILRLLPSMQMIRLVSSGTEAGMSAIRLARGATGRSKLIKFEGCYHGHADALLVKAGSGLATFGNATSAGVPAEVVQHTLVLEYNSIEQLE 192          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_CAMJR (Glutamate-1-semialdehyde 2,1-aminomutase OS=Campylobacter jejuni (strain RM1221) GN=hemL PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.822e-50
Identity = 94/185 (50.81%), Postives = 129/185 (69.73%), Query Frame = 1
Query:  205 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            +++AF  A + + GGVNSPVRAF +V  +P      KG++++DIDGN YIDYV SWGP + GH D  +  A  + + KG+SFGAP LLE  LA++V+S  P +E +RFV+SGTEA M  +RLAR FT +++I+KFEGCYHGH+D  LV AGSG AT   P S GV +     TL A +ND+++++
Sbjct:    3 NKKAFKEACKFIAGGVNSPVRAFANVQSEPKFISHGKGAYIFDIDGNSYIDYVQSWGPLLFGHCDKDIQKACQKALHKGSSFGAPTLLETELAKLVLSDFPHLEKIRFVSSGTEATMSAIRLARGFTKKDKILKFEGCYHGHSDSLLVSAGSGAATFNSPSSLGVLEDVAKHTLVAKYNDINSVK 187          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_CAMJJ (Glutamate-1-semialdehyde 2,1-aminomutase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=hemL PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.822e-50
Identity = 94/185 (50.81%), Postives = 129/185 (69.73%), Query Frame = 1
Query:  205 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            +++AF  A + + GGVNSPVRAF +V  +P      KG++++DIDGN YIDYV SWGP + GH D  +  A  + + KG+SFGAP LLE  LA++V+S  P +E +RFV+SGTEA M  +RLAR FT +++I+KFEGCYHGH+D  LV AGSG AT   P S GV +     TL A +ND+++++
Sbjct:    3 NKKAFKEACKFIAGGVNSPVRAFANVQSEPKFISHGKGAYIFDIDGNSYIDYVQSWGPLLFGHCDKDIQKACQKALHKGSSFGAPTLLETELAKLVLSDFPHLEKIRFVSSGTEATMSAIRLARGFTKKDKILKFEGCYHGHSDSLLVSAGSGAATFNSPSSLGVLEDVAKHTLVAKYNDINSVK 187          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_CAMJD (Glutamate-1-semialdehyde 2,1-aminomutase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=hemL PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.822e-50
Identity = 94/185 (50.81%), Postives = 129/185 (69.73%), Query Frame = 1
Query:  205 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            +++AF  A + + GGVNSPVRAF +V  +P      KG++++DIDGN YIDYV SWGP + GH D  +  A  + + KG+SFGAP LLE  LA++V+S  P +E +RFV+SGTEA M  +RLAR FT +++I+KFEGCYHGH+D  LV AGSG AT   P S GV +     TL A +ND+++++
Sbjct:    3 NKKAFKEACKFIAGGVNSPVRAFANVQSEPKFISHGKGAYIFDIDGNSYIDYVQSWGPLLFGHCDKDIQKACQKALHKGSSFGAPTLLETELAKLVLSDFPHLEKIRFVSSGTEATMSAIRLARGFTKKDKILKFEGCYHGHSDSLLVSAGSGAATFNSPSSLGVLEDVAKHTLVAKYNDINSVK 187          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_CAMJ8 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=hemL PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.822e-50
Identity = 94/185 (50.81%), Postives = 129/185 (69.73%), Query Frame = 1
Query:  205 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            +++AF  A + + GGVNSPVRAF +V  +P      KG++++DIDGN YIDYV SWGP + GH D  +  A  + + KG+SFGAP LLE  LA++V+S  P +E +RFV+SGTEA M  +RLAR FT +++I+KFEGCYHGH+D  LV AGSG AT   P S GV +     TL A +ND+++++
Sbjct:    3 NKKAFKEACKFIAGGVNSPVRAFANVQSEPKFISHGKGAYIFDIDGNSYIDYVQSWGPLLFGHCDKDIQKACQKALHKGSSFGAPTLLETELAKLVLSDFPHLEKIRFVSSGTEATMSAIRLARGFTKKDKILKFEGCYHGHSDSLLVSAGSGAATFNSPSSLGVLEDVAKHTLVAKYNDINSVK 187          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_NOCSJ (Glutamate-1-semialdehyde 2,1-aminomutase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=hemL PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.686e-50
Identity = 96/185 (51.89%), Postives = 127/185 (68.65%), Query Frame = 1
Query:  205 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            S   F  A+ + PGGVNSPVRAF +VGG P    S +G+ + D DGNEY+D + SWGP ++GHA  +V AA+   + +GTS+GAP   E  LAE + +  P +E VRFV+SGTEA M  +RLAR FTGR+ ++KF GCYHGH D  L  AGSG+AT  +P +PGVP+ +T  TL  P+ND +A+E
Sbjct:   12 SAALFERARAVTPGGVNSPVRAFNAVGGTPRFIRSARGAWLTDADGNEYVDLICSWGPMLLGHAHPEVQAAVSAAVARGTSYGAPTEPEVELAEEIAARAP-VERVRFVSSGTEATMSAIRLARGFTGRDVVVKFAGCYHGHVDSLLASAGSGLATFAVPGTPGVPESSTALTLVLPYNDRAAVE 195          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_MYCPA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Mycobacterium paratuberculosis GN=hemL PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.686e-50
Identity = 96/184 (52.17%), Postives = 121/184 (65.76%), Query Frame = 1
Query:  205 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 756
            S   F+ A  ++PGGVNSPVRAF +VGG P    + +G  + D DGN Y+D V SWGP I+GHA   V+ A+ +    G SFGAP   E+ LA  +I+ V  +E +R VNSGTEA M  +RLAR FTGR +I+KF GCYHGH D  L  AGSGVATLGLP SPGV      +T+  P+ND+ A+
Sbjct:   17 SARLFDDACAVIPGGVNSPVRAFTAVGGTPPFITAARGCRLTDADGNHYVDLVCSWGPMILGHAHPAVVEAVAKAAASGLSFGAPTPAESELAAEMIARVAPVERIRLVNSGTEATMSAVRLARGFTGRAKIVKFSGCYHGHVDALLADAGSGVATLGLPSSPGVTGATAADTIVLPYNDIDAV 200          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_MYCA1 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Mycobacterium avium (strain 104) GN=hemL PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.686e-50
Identity = 96/184 (52.17%), Postives = 121/184 (65.76%), Query Frame = 1
Query:  205 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 756
            S   F+ A  ++PGGVNSPVRAF +VGG P    + +G  + D DGN Y+D V SWGP I+GHA   V+ A+ +    G SFGAP   E+ LA  +I+ V  +E +R VNSGTEA M  +RLAR FTGR +I+KF GCYHGH D  L  AGSGVATLGLP SPGV      +T+  P+ND+ A+
Sbjct:   17 SARLFDDACAVIPGGVNSPVRAFTAVGGTPPFITAARGCRLTDADGNHYVDLVCSWGPMILGHAHPAVVEAVAKAAASGLSFGAPTPAESELAAEMIARVAPVERIRLVNSGTEATMSAVRLARGFTGRAKIVKFSGCYHGHVDALLADAGSGVATLGLPSSPGVTGATAADTIVLPYNDIDAV 200          
The following BLAST results are available for this feature:
BLAST of CX070594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA1_BACCR2.161e-5051.04Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Baci... [more]
GSA1_BACC42.161e-5051.04Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Baci... [more]
GSA_VEREI2.822e-5053.04Glutamate-1-semialdehyde 2,1-aminomutase OS=Vermin... [more]
GSA_CAMJR2.822e-5050.81Glutamate-1-semialdehyde 2,1-aminomutase OS=Campyl... [more]
GSA_CAMJJ2.822e-5050.81Glutamate-1-semialdehyde 2,1-aminomutase OS=Campyl... [more]
GSA_CAMJD2.822e-5050.81Glutamate-1-semialdehyde 2,1-aminomutase OS=Campyl... [more]
GSA_CAMJ82.822e-5050.81Glutamate-1-semialdehyde 2,1-aminomutase OS=Campyl... [more]
GSA_NOCSJ3.686e-5051.89Glutamate-1-semialdehyde 2,1-aminomutase OS=Nocard... [more]
GSA_MYCPA3.686e-5052.17Glutamate-1-semialdehyde 2,1-aminomutase OS=Mycoba... [more]
GSA_MYCA13.686e-5052.17Glutamate-1-semialdehyde 2,1-aminomutase OS=Mycoba... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17G04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17G04-M7-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070594 ID=CX070594; Name=CX070594; organism=Citrus sinensis; type=EST; length=763bp
CATTGACCGAGGAAAAGAGAAAGAGACTTCAGAGAGAGCGACACAAAAAT
GGCAGCTACAATTACAGGGGTAGGAGTTGGGTTAGGGCTTTCATGTTCAT
CAAAGCTCACCAACAGATTTTCTTCTTCTGCTGGATCCTCTCGCTGTAGT
GTTAAAATGTCGGTCTCTGTTGAGGAGCAGAGGAAAAATTTCACTTTAAA
AAAATCTGAAGAAGCTTTCAATGTCGCCAAGGAATTGATGCCTGGAGGTG
TAAATTCACCTGTACGTGCCTTCAAATCTGTTGGTGGTCAACCTATTGTG
TTTGATTCCGTCAAGGGCTCACACATGTGGGATATCGATGGCAATGAGTA
CATTGACTATGTAGGTTCTTGGGGGCCGGCAATTATTGGTCACGCAGATG
ATCAGGTACTAGCAGCCTTGGGTGAAACAATGAAGAAAGGAACAAGCTTT
GGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAGAAATGGTAATCTCAGC
TGTTCCAAGCATAGAAATGGTTCGTTTTGTTAACTCAGGCACAGAAGCAT
GCATGGGTGTGCTTCGCCTTGCCCGTGCCTTCACTGGGAGAGAGAGGATC
ATCAAATTTGAGGGTTGTTATCATGGCCATGCTGATCCATTTCTTGTCAA
GGCTGGTAGTGGAGTTGCCACCCTAGGGCTTCCCGACTCCCCTGGTGTTC
CTAAAGGAGCCACCTATGAAACTTTGACAGCCCCCTTCAATGATGTCTCG
GCTTTGGAAAATC
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