CX070594

Overview
NameCX070594
Unique NameCX070594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA1_STAA2 (Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Staphylococcus aureus (strain JH1) GN=hemL1 PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.334e-67
Identity = 125/186 (67.20%), Postives = 146/186 (78.49%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            KSEEA  VA+ LMPGGVNSPVRAFKSV    I  D  KGS ++DIDGNEYIDYV SWGP I+GH D QV++ L E + KGTSFGA  LLEN LA++VI  VPSIE VR V+SGTEA +  LRLAR +TGR +I+KFEGCYHGH+D  L+KAGSGVATLGLPDSPGVP+G    T+T P+ND+ AL+
Sbjct:    5 KSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMDHGKGSKIYDIDGNEYIDYVLSWGPLILGHRDPQVISHLHEAIDKGTSFGASTLLENKLAQLVIDRVPSIEKVRMVSSGTEATLDTLRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGIAKNTITVPYNDLDALK 190          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA1_STAA1 (Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=hemL1 PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.334e-67
Identity = 125/186 (67.20%), Postives = 146/186 (78.49%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            KSEEA  VA+ LMPGGVNSPVRAFKSV    I  D  KGS ++DIDGNEYIDYV SWGP I+GH D QV++ L E + KGTSFGA  LLEN LA++VI  VPSIE VR V+SGTEA +  LRLAR +TGR +I+KFEGCYHGH+D  L+KAGSGVATLGLPDSPGVP+G    T+T P+ND+ AL+
Sbjct:    5 KSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMDHGKGSKIYDIDGNEYIDYVLSWGPLILGHRDPQVISHLHEAIDKGTSFGASTLLENKLAQLVIDRVPSIEKVRMVSSGTEATLDTLRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGIAKNTITVPYNDLDALK 190          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA2_STAHJ (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 8.173e-66
Identity = 121/187 (64.71%), Postives = 145/187 (77.54%), Query Frame = 1
Query:  199 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            +KS EA  +A+ LMPGGVNSPVRAFKSV    I  D  KGS ++DIDGNEYIDYV SWGP I+GH ++QV+  L E + +GTSFGA  L EN LAE+VI  VPSIE VR V+SGTEA +  LRLAR +TGR +IIKFEGCYHGH+D  L+KAGSGVATLGLPDSPGVP+G    T+T P+ND+ A++
Sbjct:    4 EKSIEAMKIAENLMPGGVNSPVRAFKSVDTPAIFMDHAKGSRIYDIDGNEYIDYVLSWGPLILGHKNEQVIKKLHEAVNRGTSFGASTLEENKLAELVIERVPSIEKVRMVSSGTEATLAALRLARGYTGRNKIIKFEGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGTAKNTITVPYNDLEAIK 190          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA2_BACP2 (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Bacillus pumilus (strain SAFR-032) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.106e-65
Identity = 116/187 (62.03%), Postives = 147/187 (78.61%), Query Frame = 1
Query:  199 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            +KS++AF  A+ LMPGGVNSPVRAFKSV   PI  +  KG+ ++DIDGNEYIDYV SWGP I+GH +D+V+ ++    +KGTSFGA  L+EN LA++V   VPSIE++R V+SGTEA M  LRLAR FTGR +I+KFEGCYHGH D  L+KAGSGVATLGLPDSPGVP+G    T+T P+ND+ +++
Sbjct:    6 EKSKQAFEEAQHLMPGGVNSPVRAFKSVNTDPIFMERGKGAKIYDIDGNEYIDYVLSWGPLILGHTNDRVVESIQRVAEKGTSFGASTLVENELAKLVSERVPSIEVIRMVSSGTEATMSALRLARGFTGRNKIVKFEGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGTASNTITVPYNDLESIQ 192          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA1_MACCJ (Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Macrococcus caseolyticus (strain JCSC5402) GN=hemL1 PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.056e-65
Identity = 121/186 (65.05%), Postives = 144/186 (77.42%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            KS++AF  A  LMPGGVNSPVRAFKSV   PI  +  KGS ++DIDGNEYIDYV SWGP I+GHA+D V  AL + +  GTSFGAP  LEN +AE+VI  VPSIEMVR V+SGTEA +  LRLAR FTG+ +I+KF GCYHGH+D  L+KAGSGVATLGLPDSPGVPKG    T+T  +ND+ A++
Sbjct:    5 KSKQAFKEAVNLMPGGVNSPVRAFKSVDMDPIFMERGKGSKIYDIDGNEYIDYVLSWGPLILGHANDTVTGALNKAVLNGTSFGAPTELENKMAELVIERVPSIEMVRMVSSGTEATLAALRLARGFTGKNKILKFIGCYHGHSDSLLIKAGSGVATLGLPDSPGVPKGTAENTITVHYNDLDAVK 190          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA2_BACCN (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 9.037e-65
Identity = 119/188 (63.30%), Postives = 147/188 (78.19%), Query Frame = 1
Query:  196 LKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            L KS +AF  A++LMPGGVNSPVRAFKSVG  P+  +  KGS ++DIDGNEYIDYV SWGP I GHA+++V+ +L    +KGTSFGAP  +EN LA++VI  VPSIE+VR VNSGTEA M  LRLAR +TGR +I+KF GCYHGH D  L+KAGSGVATLGLPDSPGVP+G    T+T  +ND+ +++
Sbjct:    4 LDKSIKAFEEAQDLMPGGVNSPVRAFKSVGMNPLFMEQGKGSKVYDIDGNEYIDYVLSWGPLIHGHANERVVESLKAVAEKGTSFGAPTEIENKLAQLVIERVPSIEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAQNTITVAYNDLESVK 191          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_BACSU (Glutamate-1-semialdehyde 2,1-aminomutase OS=Bacillus subtilis GN=hemL PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.541e-64
Identity = 117/187 (62.57%), Postives = 148/187 (79.14%), Query Frame = 1
Query:  199 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            +KS+ AF  A++LMPGGVNSPVRAFKSV   PI  +  KGS ++DIDGNEYIDYV SWGP I+GH +D+V+ +L +  + GTSFGAP  +EN LA++VI  VPS+E+VR V+SGTEA M  LRLAR +TGR +I+KFEGCYHGH D  L+KAGSGVATLGLPDSPGVP+G    T+T P+ND+ +++
Sbjct:    5 EKSKTAFKEAQKLMPGGVNSPVRAFKSVDMDPIFMERGKGSKIFDIDGNEYIDYVLSWGPLILGHTNDRVVESLKKVAEYGTSFGAPTEVENELAKLVIDRVPSVEIVRMVSSGTEATMSALRLARGYTGRNKILKFEGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGIAKNTITVPYNDLESVK 191          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA2_BACWK (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Bacillus weihenstephanensis (strain KBAB4) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.541e-64
Identity = 120/186 (64.52%), Postives = 144/186 (77.42%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            KS  AF  A+ LMPGGVNSPVRAFKSVG  P+  +  KGS ++DIDGNEYIDYV SWGP I GHA+D+V+ AL    +KGTSFGAP  +EN LA++VI  VPSIE+VR VNSGTEA M  LRLAR +TGR +I+KF GCYHGH D  L+KAGSGVATLGLPDSPGVP+G    T+T  +ND+ +++
Sbjct:    6 KSIAAFEEAQNLMPGGVNSPVRAFKSVGMNPLFMERGKGSKVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAEKGTSFGAPTEIENKLAQLVIERVPSIEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVK 191          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA2_BACCR (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.013e-64
Identity = 119/186 (63.98%), Postives = 145/186 (77.96%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            KS  AF  A++LMPGGVNSPVRAFKSVG  P+  +  KGS ++DIDGNEYIDYV SWGP I GHA+D+V+ AL    ++GTSFGAP  +EN LA++VI  VPSIE+VR VNSGTEA M  LRLAR +TGR +I+KF GCYHGH D  L+KAGSGVATLGLPDSPGVP+G    T+T  +ND+ +++
Sbjct:    6 KSIAAFEEAQDLMPGGVNSPVRAFKSVGMNPLFMERGKGSKVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKSVAERGTSFGAPTEIENKLAKLVIERVPSIEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVK 191          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA2_BACC4 (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Bacillus cereus (strain B4264) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.013e-64
Identity = 119/186 (63.98%), Postives = 145/186 (77.96%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            KS  AF  A++LMPGGVNSPVRAFKSVG  P+  +  KGS ++DIDGNEYIDYV SWGP I GHA+D+V+ AL    ++GTSFGAP  +EN LA++VI  VPSIE+VR VNSGTEA M  LRLAR +TGR +I+KF GCYHGH D  L+KAGSGVATLGLPDSPGVP+G    T+T  +ND+ +++
Sbjct:    6 KSIAAFEEAQDLMPGGVNSPVRAFKSVGMNPLFMERGKGSKVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKSVAERGTSFGAPTEIENKLAKLVIERVPSIEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVK 191          
The following BLAST results are available for this feature:
BLAST of CX070594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA1_STAA24.334e-6767.20Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Stap... [more]
GSA1_STAA14.334e-6767.20Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Stap... [more]
GSA2_STAHJ8.173e-6664.71Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Stap... [more]
GSA2_BACP23.106e-6562.03Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Baci... [more]
GSA1_MACCJ4.056e-6565.05Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Macr... [more]
GSA2_BACCN9.037e-6563.30Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Baci... [more]
GSA_BACSU1.541e-6462.57Glutamate-1-semialdehyde 2,1-aminomutase OS=Bacill... [more]
GSA2_BACWK1.541e-6464.52Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Baci... [more]
GSA2_BACCR2.013e-6463.98Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Baci... [more]
GSA2_BACC42.013e-6463.98Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Baci... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17G04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17G04-M7-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070594 ID=CX070594; Name=CX070594; organism=Citrus sinensis; type=EST; length=763bp
CATTGACCGAGGAAAAGAGAAAGAGACTTCAGAGAGAGCGACACAAAAAT
GGCAGCTACAATTACAGGGGTAGGAGTTGGGTTAGGGCTTTCATGTTCAT
CAAAGCTCACCAACAGATTTTCTTCTTCTGCTGGATCCTCTCGCTGTAGT
GTTAAAATGTCGGTCTCTGTTGAGGAGCAGAGGAAAAATTTCACTTTAAA
AAAATCTGAAGAAGCTTTCAATGTCGCCAAGGAATTGATGCCTGGAGGTG
TAAATTCACCTGTACGTGCCTTCAAATCTGTTGGTGGTCAACCTATTGTG
TTTGATTCCGTCAAGGGCTCACACATGTGGGATATCGATGGCAATGAGTA
CATTGACTATGTAGGTTCTTGGGGGCCGGCAATTATTGGTCACGCAGATG
ATCAGGTACTAGCAGCCTTGGGTGAAACAATGAAGAAAGGAACAAGCTTT
GGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAGAAATGGTAATCTCAGC
TGTTCCAAGCATAGAAATGGTTCGTTTTGTTAACTCAGGCACAGAAGCAT
GCATGGGTGTGCTTCGCCTTGCCCGTGCCTTCACTGGGAGAGAGAGGATC
ATCAAATTTGAGGGTTGTTATCATGGCCATGCTGATCCATTTCTTGTCAA
GGCTGGTAGTGGAGTTGCCACCCTAGGGCTTCCCGACTCCCCTGGTGTTC
CTAAAGGAGCCACCTATGAAACTTTGACAGCCCCCTTCAATGATGTCTCG
GCTTTGGAAAATC
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