CX070594

Overview
NameCX070594
Unique NameCX070594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA2_BACLD (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.226e-63
Identity = 115/187 (61.50%), Postives = 145/187 (77.54%), Query Frame = 1
Query:  199 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            +KS+ AF  A+ +MPGGVNSPVRAFKSV   PI  +  KGS ++DIDGNEYIDYV SWGP I+GH++++V+  + +  + GTSFGAP  LE  LAE+VI  VPSIE+VR V+SGTEA M  LRLAR +TGR +I+KFEGCYHGH D  L+KAGSGVATLGLPDSPGVP+     T+T P+ND+ +++
Sbjct:    5 EKSKAAFEEAQRVMPGGVNSPVRAFKSVNMDPIFMERGKGSKIYDIDGNEYIDYVLSWGPLILGHSNEKVVKEIQKAAEHGTSFGAPTELETELAELVIDRVPSIEIVRMVSSGTEATMSALRLARGYTGRNKIVKFEGCYHGHGDSLLIKAGSGVATLGLPDSPGVPESIAKNTITVPYNDLESMK 191          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA2_ANOFW (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=hemL2 PE=3 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 2.907e-63
Identity = 115/186 (61.83%), Postives = 145/186 (77.96%), Query Frame = 1
Query:  199 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 756
            ++S+ A+  A +LMPGGVNSPVRAFK+V   PI     KGS ++DIDGNEYIDYV SWGP I+GHA+DQV+ AL    + GTSFGAP L+EN LA++V+  +PSIE++R V+SGTEA M  LRLAR +TGR +I+KFEGCYHGH D  L+KAGSGVATLGLPDSPGVP+     T+T P+ND+ ++
Sbjct:    5 ERSKAAYAEAVKLMPGGVNSPVRAFKAVKMDPIFMARGKGSKIYDIDGNEYIDYVLSWGPLILGHANDQVVEALKRVAETGTSFGAPTLIENELAKLVMERMPSIEIIRMVSSGTEATMSALRLARGYTGRNKIVKFEGCYHGHGDSLLIKAGSGVATLGLPDSPGVPETVAQHTITVPYNDLQSV 190          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_SOLUE (Glutamate-1-semialdehyde 2,1-aminomutase OS=Solibacter usitatus (strain Ellin6076) GN=hemL PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.797e-63
Identity = 116/189 (61.38%), Postives = 142/189 (75.13%), Query Frame = 1
Query:  193 TLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            T  KSEE F  A E +PGGVNSPVRAF+SVGGQP+     +GSH++D+DGNEYIDYVGSWGP I+GH   ++LAAL   ++ GTSFGAP   E  LA+ +I AVPS+EMVR VNSGTEA M  +R+AR FTGR+ ++KFEGCYHGH D  LVKAGSG+ATLG+ D+ GVPK     T+  P+N + ALE
Sbjct:    2 THTKSEELFRRAVEKIPGGVNSPVRAFRSVGGQPVFIARGQGSHLFDVDGNEYIDYVGSWGPLILGHRHPEILAALERALEIGTSFGAPTEQEIDLADAIIDAVPSVEMVRLVNSGTEATMSAIRVARGFTGRDLVVKFEGCYHGHVDSLLVKAGSGMATLGIADTQGVPKAFADTTIPLPYNSLDALE 190          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA2_STAS1 (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.797e-63
Identity = 118/185 (63.78%), Postives = 142/185 (76.76%), Query Frame = 1
Query:  205 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            SE+A   A+ELMPGGVNSPVRAFKSV    I  D  +GS ++DIDGNEYIDYV SWGP I+GH + QV+  + E + KGTSFGA  L EN LAE+VI  VPSIE VR V+SGTEA +  LRLAR +TGR +I+KF GCYHGH+D  L+KAGSGVATLGLPDSPGVP+G    T+T P+ND+ A++
Sbjct:    6 SEKAMAKAEELMPGGVNSPVRAFKSVDTPAIFMDHGEGSRIYDIDGNEYIDYVLSWGPLILGHKNKQVIEKIHEAVDKGTSFGASTLQENKLAELVIERVPSIEKVRMVSSGTEATLDTLRLARGYTGRNKIVKFVGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGIAKNTITVPYNDLDAIK 190          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA1_STACT (Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Staphylococcus carnosus (strain TM300) GN=hemL1 PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 6.476e-63
Identity = 118/186 (63.44%), Postives = 143/186 (76.88%), Query Frame = 1
Query:  199 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 756
            +KS EA+  A++LMPGGVNSPVRAFKSV    I  D  KGS ++DIDGNEYIDYV SWGP I+GH + QV+  L + + KGTSFGA  L E  LAE+VI  VPSIE VR V+SGTEA    +RLAR +TGR++I+KFEGCYHGH+D  L+KAGSGVATLGLPDSPGVP+G    T+T P+ND+ A+
Sbjct:    4 EKSIEAYKKAEQLMPGGVNSPVRAFKSVDMPAIFMDHGKGSKIYDIDGNEYIDYVLSWGPLILGHENPQVIENLHKAVDKGTSFGASTLEEIKLAELVIDRVPSIEKVRMVSSGTEATQDTIRLARGYTGRDKIVKFEGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGTAKSTITVPYNDLDAI 189          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA2_GEOKA (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Geobacillus kaustophilus GN=hemL2 PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.105e-62
Identity = 116/186 (62.37%), Postives = 144/186 (77.42%), Query Frame = 1
Query:  199 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 756
            ++S+ A+  A +LMPGGVNSPVRAFKSVG  PI     +G+ ++DIDGNEYIDYV SWGP I+GHA+ QV+ AL    ++GTSFGAP LLEN LA++VI  VPS+E+VR VNSGTEA M  LRLAR +T R +I+KFEG YHGH D  L+KAGSGVATLGLPDSPGVP+     T+T P+ND+ ++
Sbjct:    5 ERSKTAYEEAVKLMPGGVNSPVRAFKSVGMTPIFMARGQGAKIYDIDGNEYIDYVLSWGPLILGHANPQVVEALKRVAEQGTSFGAPTLLENELAKLVIERVPSVEIVRMVNSGTEATMSALRLARGYTKRNKIMKFEGSYHGHGDSLLIKAGSGVATLGLPDSPGVPESVAQHTITVPYNDLDSV 190          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA1_LISMF (Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=hemL1 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.884e-62
Identity = 114/186 (61.29%), Postives = 141/186 (75.81%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            KSE+AF  AK+++PGGVNSPVRAF SV   P+  D  KG+++ D+DGNEYIDYV SWGP I+GHAD  V+ A+ +   KGTSFG P  +E  LA++VI  VPSIE+VR V+SGTEA M  +RLAR +T RE+I+KFEG YHGH D  L+KAGSGVATLGLPDSPGV KG   +T+T P+ND+   E
Sbjct:    6 KSEKAFKEAKKVLPGGVNSPVRAFNSVDASPVFMDHGKGAYITDVDGNEYIDYVLSWGPLILGHADPAVVNAITKAALKGTSFGTPTEIETELAKLVIERVPSIEIVRMVSSGTEATMSAIRLARGYTKREKILKFEGSYHGHGDSLLIKAGSGVATLGLPDSPGVTKGLAADTITVPYNDIEGAE 191          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA1_LISMC (Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=hemL1 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.884e-62
Identity = 114/186 (61.29%), Postives = 141/186 (75.81%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            KSE+AF  AK+++PGGVNSPVRAF SV   P+  D  KG+++ D+DGNEYIDYV SWGP I+GHAD  V+ A+ +   KGTSFG P  +E  LA++VI  VPSIE+VR V+SGTEA M  +RLAR +T RE+I+KFEG YHGH D  L+KAGSGVATLGLPDSPGV KG   +T+T P+ND+   E
Sbjct:    6 KSEKAFKEAKKVLPGGVNSPVRAFNSVDASPVFMDHGKGAYITDVDGNEYIDYVLSWGPLILGHADPAVVNAITKAALKGTSFGTPTEIETELAKLVIERVPSIEIVRMVSSGTEATMSAIRLARGYTKREKILKFEGSYHGHGDSLLIKAGSGVATLGLPDSPGVTKGLAADTITVPYNDIEGAE 191          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_HELMI (Glutamate-1-semialdehyde 2,1-aminomutase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=hemL PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.461e-62
Identity = 108/186 (58.06%), Postives = 143/186 (76.88%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            +SE+ F  AK L+PGGVNSPVRAFKSVG  P+  +  +G++++D+DGN+Y+DYVGSWGP I+GHA  +V  AL   + +GTS+GAP  LE+ LA++++ A P+++MVR VNSGTEA M  LRLAR +TGR +I+KFEGCYHGHAD  L+KAGSG  TLG+P SPGVP      T+TAP+ND+  L+
Sbjct:    7 RSEQLFAEAKTLIPGGVNSPVRAFKSVGRNPVFIERAEGAYLYDVDGNKYVDYVGSWGPMIVGHAHPEVSEALKAAIDRGTSYGAPTELESRLAKLILEAFPAMDMVRMVNSGTEATMSALRLARGYTGRSKIVKFEGCYHGHADSLLIKAGSGALTLGVPTSPGVPANIANNTITAPYNDLETLK 192          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA1_LISIN (Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Listeria innocua GN=hemL1 PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.461e-62
Identity = 114/182 (62.64%), Postives = 140/182 (76.92%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV 747
            KSE+AF  AK+++PGGVNSPVRAF SV   P+  D  KG+++ D+DGNEYIDYV SWGP I+GHAD  V+ A+  +  KGTSFG P  +E  LA++VI  VPSIE+VR V+SGTEA M  +RLAR +T RE+I+KFEG YHGH D  L+KAGSGVATLGLPDSPGV KG   +T+T P+NDV
Sbjct:    6 KSEKAFKEAKKVLPGGVNSPVRAFNSVDASPVFMDHGKGAYITDVDGNEYIDYVLSWGPLILGHADPSVVNAITNSAMKGTSFGTPTEIETELAKLVIERVPSIEIVRMVSSGTEATMSAIRLARGYTKREKILKFEGSYHGHGDSLLIKAGSGVATLGLPDSPGVTKGLAADTITVPYNDV 187          
The following BLAST results are available for this feature:
BLAST of CX070594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA2_BACLD2.226e-6361.50Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Baci... [more]
GSA2_ANOFW2.907e-6361.83Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Anox... [more]
GSA_SOLUE3.797e-6361.38Glutamate-1-semialdehyde 2,1-aminomutase OS=Soliba... [more]
GSA2_STAS13.797e-6363.78Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Stap... [more]
GSA1_STACT6.476e-6363.44Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Stap... [more]
GSA2_GEOKA1.105e-6262.37Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Geob... [more]
GSA1_LISMF1.884e-6261.29Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=List... [more]
GSA1_LISMC1.884e-6261.29Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=List... [more]
GSA_HELMI2.461e-6258.06Glutamate-1-semialdehyde 2,1-aminomutase OS=Heliob... [more]
GSA1_LISIN2.461e-6262.64Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=List... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17G04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17G04-M7-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070594 ID=CX070594; Name=CX070594; organism=Citrus sinensis; type=EST; length=763bp
CATTGACCGAGGAAAAGAGAAAGAGACTTCAGAGAGAGCGACACAAAAAT
GGCAGCTACAATTACAGGGGTAGGAGTTGGGTTAGGGCTTTCATGTTCAT
CAAAGCTCACCAACAGATTTTCTTCTTCTGCTGGATCCTCTCGCTGTAGT
GTTAAAATGTCGGTCTCTGTTGAGGAGCAGAGGAAAAATTTCACTTTAAA
AAAATCTGAAGAAGCTTTCAATGTCGCCAAGGAATTGATGCCTGGAGGTG
TAAATTCACCTGTACGTGCCTTCAAATCTGTTGGTGGTCAACCTATTGTG
TTTGATTCCGTCAAGGGCTCACACATGTGGGATATCGATGGCAATGAGTA
CATTGACTATGTAGGTTCTTGGGGGCCGGCAATTATTGGTCACGCAGATG
ATCAGGTACTAGCAGCCTTGGGTGAAACAATGAAGAAAGGAACAAGCTTT
GGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAGAAATGGTAATCTCAGC
TGTTCCAAGCATAGAAATGGTTCGTTTTGTTAACTCAGGCACAGAAGCAT
GCATGGGTGTGCTTCGCCTTGCCCGTGCCTTCACTGGGAGAGAGAGGATC
ATCAAATTTGAGGGTTGTTATCATGGCCATGCTGATCCATTTCTTGTCAA
GGCTGGTAGTGGAGTTGCCACCCTAGGGCTTCCCGACTCCCCTGGTGTTC
CTAAAGGAGCCACCTATGAAACTTTGACAGCCCCCTTCAATGATGTCTCG
GCTTTGGAAAATC
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