CX070593

Overview
NameCX070593
Unique NameCX070593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_PROM3 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain MIT 9303) GN=hemL PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 1.637e-53
Identity = 104/171 (60.82%), Postives = 123/171 (71.93%), Query Frame = -2
Query:    4 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 516
            I P+P FL  +R +T+E+GALL+FDEVM+GFR++YGGAQ  FGVTPD           LPVGAYGGR +IMEMVAPAGPMYQAGTLSGNPLAMTAGI TL+ LK+ GTYE L   T  L  GI++A K A   I G  I  MFGFF  EGPV NFEDAK ++  +F + +R
Sbjct:  215 ITPEPGFLEGLRELTREHGALLVFDEVMSGFRISYGGAQARFGVTPDLTTMGKVIGGGLPVGAYGGRAEIMEMVAPAGPMYQAGTLSGNPLAMTAGIKTLELLKQEGTYERLESTTERLINGILEAAKAAEVPITGNSIGAMFGFFLCEGPVRNFEDAKATDAERFGKLHR 385          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_PROM0 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain MIT 9301) GN=hemL PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 3.646e-53
Identity = 100/171 (58.48%), Postives = 126/171 (73.68%), Query Frame = -2
Query:    4 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 516
            I P+P FL  +R +T ENG+LL+FDEVMTGFR++YGGAQE FGVTPD           LPVGAYGG+++IM MVAPAGP+YQAGTLSGNPLAMTAGI TL+ LK+ GTY+ L+ +T  L +GII + +  G AI GG +S MFGFF  +GPV NF +AK ++   F + +R
Sbjct:  219 ITPEPGFLEGLRELTTENGSLLVFDEVMTGFRISYGGAQEKFGVTPDLTTLGKVIGGGLPVGAYGGKKEIMSMVAPAGPVYQAGTLSGNPLAMTAGIKTLELLKQEGTYDKLDSLTSRLIEGIIQSAENNGIAINGGSVSAMFGFFLCDGPVRNFNEAKTNDAELFGKLHR 389          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_PROM5 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain MIT 9515) GN=hemL PE=3 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 4.761e-53
Identity = 101/171 (59.06%), Postives = 125/171 (73.10%), Query Frame = -2
Query:    4 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 516
            I P+P FL  +R +T ENG+LL+FDEVMTGFR++YGGAQE FGVTPD           LPVGAYGGR++IM MVAP+GP+YQAGTLSGNPLAMTAGI TL+ LK+ GTYE +   T  L +GI+ + +  G AI GG +S MFGFF  EGPV NFE+AK + +  F + +R
Sbjct:  219 ITPEPGFLEGLRELTTENGSLLVFDEVMTGFRISYGGAQEKFGVTPDLTTLGKVIGGGLPVGAYGGRKEIMSMVAPSGPVYQAGTLSGNPLAMTAGIKTLELLKQEGTYEKMGLATSRLIEGIMQSAENNGIAINGGSVSAMFGFFLCEGPVRNFEEAKTNNSELFGKLHR 389          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_GLOVI (Glutamate-1-semialdehyde 2,1-aminomutase OS=Gloeobacter violaceus GN=hemL PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 6.219e-53
Identity = 101/172 (58.72%), Postives = 124/172 (72.09%), Query Frame = -2
Query:    1 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 516
            + P+  FL  +R +T  +G +LIFDEVMTGFRL+YGGAQ  +G+ PD           LPVGAY GRR+IM+MVAPAGPMYQAGTLSGNPLAMTAGI TL+ L+ PGTYE L  ++  L  G++ A ++AGHA  G  +  MF  FFTEGPV NF DAK+S+  KFARF+RG
Sbjct:  220 LVPEIGFLEGLRDLTHAHGTVLIFDEVMTGFRLSYGGAQARYGIEPDLTCLGKIIGGGLPVGAYAGRREIMQMVAPAGPMYQAGTLSGNPLAMTAGIKTLEILQRPGTYERLEGLSARLADGLLAAAREAGHAATGNRVGAMFTLFFTEGPVRNFADAKRSDLQKFARFHRG 391          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_PROMS (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain AS9601) GN=hemL PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.809e-52
Identity = 99/171 (57.89%), Postives = 126/171 (73.68%), Query Frame = -2
Query:    4 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 516
            I P+P FL  +R +T ENG+LL+FDEVMTGFR++YGGAQE FGVTPD           LPVGAYGG+++IM MVAP+GP+YQAGTLSGNPLAMTAGI TL+ LK+ GTY+ L+ IT  L +GII + +  G AI GG +S MFGFF  +GPV NF +AK ++   F + ++
Sbjct:  219 ITPEPGFLEGLRELTTENGSLLVFDEVMTGFRISYGGAQEKFGVTPDLTTLGKVIGGGLPVGAYGGKKEIMSMVAPSGPVYQAGTLSGNPLAMTAGIKTLELLKQDGTYDKLDLITSRLIEGIIQSAENNGIAINGGSVSAMFGFFLCDGPVRNFNEAKTNDAELFGKLHK 389          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA2_BREBN (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.938e-46
Identity = 90/170 (52.94%), Postives = 117/170 (68.82%), Query Frame = -2
Query:    7 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY 516
            + P+P FL  +R IT+++G LLIFDEVMTGFR+A GGAQE +G+TPD           LPVGAYGG+R+IM+ VAPAGP+YQAGTLSGNPLAM AG+ TL+ L +PG YE L K++  L +G+ D  KK G       +  M   FFTE PV N+E AK S+  +F+ ++
Sbjct:  215 VPPQPGFLEGLREITEKHGTLLIFDEVMTGFRVALGGAQELYGITPDLTTMGKVIGGGLPVGAYGGKREIMQQVAPAGPIYQAGTLSGNPLAMAAGLTTLQELSKPGAYERLEKMSARLAEGLADNAKKLGIPHTLNRVGSMVCLFFTETPVINYETAKTSDLERFSAYF 384          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_ROSCS (Glutamate-1-semialdehyde 2,1-aminomutase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=hemL PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 3.305e-46
Identity = 88/170 (51.76%), Postives = 116/170 (68.24%), Query Frame = -2
Query:    7 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY 516
            + P+P FL  +RR+  E+GALLIFDEVMTGFR+ YGGAQ  +G+TPD           LP  AYGGRRD+ME++APAGP+YQAGTLSGNPLAM AG  TL+ ++ PG +E L +    L  G   A  +A  A+   Y   M+GFFFT+ PV ++  AKKS+T ++A+F+
Sbjct:  215 VLPQPGFLEGLRRLADEHGALLIFDEVMTGFRVGYGGAQGKYGITPDLTCLGKVIGGGLPAAAYGGRRDLMELIAPAGPVYQAGTLSGNPLAMAAGAATLRAIRAPGVFEQLERAAAMLCSGFEHAAAEADIALRTAYAGSMWGFFFTDEPVVDYVSAKKSDTQRYAQFF 384          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_ROSS1 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Roseiflexus sp. (strain RS-1) GN=hemL PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.142e-45
Identity = 89/170 (52.35%), Postives = 115/170 (67.65%), Query Frame = -2
Query:    7 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY 516
            + P+P FL  +RR+  E+GALLIFDEVMTGFR+AYGGAQ  +G+TPD           LP  AYGGRR++ME++APAGP+YQAGTLSGNPLAM AGI TL+ +  PG +E L + T  L  G   A   A   +   Y   M+GFFFT  PV ++  AKK++T ++ARF+
Sbjct:  215 VLPQPGFLAGLRRLADEHGALLIFDEVMTGFRVAYGGAQGRYGITPDLTCLGKVIGGGLPAAAYGGRRELMELIAPAGPVYQAGTLSGNPLAMAAGIATLRIIGAPGVFERLEQATAALCAGFERAAADADIPLRAAYAGSMWGFFFTGDPVVDYASAKKADTRRYARFF 384          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_MOOTA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Moorella thermoacetica (strain ATCC 39073) GN=hemL PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 3.654e-45
Identity = 91/171 (53.22%), Postives = 117/171 (68.42%), Query Frame = -2
Query:    4 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 516
            + P   FL  +R ITKE G+LLIFDEVMTGFR+A+GGAQ  +G+ PD           LPVGAYGGRR+IME VAP+GP+YQAGTLSGNPLA++AG+ TLK LK+PGTYE L  ++  L +G+ +A  +AG  +    +  MF  FF  GPV ++  A  S+T  FA F+R
Sbjct:  220 VPPLTGFLAGLRTITKEYGSLLIFDEVMTGFRVAFGGAQALYGIRPDLTCLGKIIGGGLPVGAYGGRREIMERVAPSGPIYQAGTLSGNPLAVSAGLATLKVLKKPGTYERLESLSARLEKGLKEAAAEAGVPVTFNRVGAMFTTFFNPGPVTDYATATASDTRAFAAFFR 390          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_DESAA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=hemL PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.063e-44
Identity = 88/172 (51.16%), Postives = 113/172 (65.70%), Query Frame = -2
Query:    1 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 516
            +APKP+F+  +R +  + G +LI DEVMTGFR+A GGAQ  +GVTPD           LPVGAYGG+R +ME +AP+GP+YQAGTLSGNP+AM AGI TLK +  PG YE L K +  L  G+  A   AG       +  M   FF+ GPV NFEDAKK +  +F++FY+G
Sbjct:  213 VAPKPEFIQGLREVCDQYGIVLILDEVMTGFRVALGGAQSLYGVTPDLTTMGKVIGGGLPVGAYGGKRSLMEKIAPSGPVYQAGTLSGNPMAMAAGIATLKEISAPGFYEALEKSSQTLADGLKKAAADAGVEAVISRVGSMQTLFFSAGPVENFEDAKKCDLDRFSKFYQG 384          
The following BLAST results are available for this feature:
BLAST of CX070593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_PROM31.637e-5360.82Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_PROM03.646e-5358.48Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_PROM54.761e-5359.06Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_GLOVI6.219e-5358.72Glutamate-1-semialdehyde 2,1-aminomutase OS=Gloeob... [more]
GSA_PROMS1.809e-5257.89Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA2_BREBN1.938e-4652.94Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Brev... [more]
GSA_ROSCS3.305e-4651.76Glutamate-1-semialdehyde 2,1-aminomutase OS=Roseif... [more]
GSA_ROSS12.142e-4552.35Glutamate-1-semialdehyde 2,1-aminomutase OS=Roseif... [more]
GSA_MOOTA3.654e-4553.22Glutamate-1-semialdehyde 2,1-aminomutase OS=Moorel... [more]
GSA_DESAA1.063e-4451.16Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulf... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17G04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17G04-M7-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070593 ID=CX070593; Name=CX070593; organism=Citrus sinensis; type=EST; length=517bp
TCCCCTGTAAAATCTTGCAAACTTTGTGGTTTCACTCTTCTTTGCATCCT
CAAAGTTGTAAACAGGCCCTTCGGTAAAGAAAAATCCAAACATCCCACTT
ATATACCCTCCACAAATGGCATGCCCAGCTTTCTTTCCAGCATCAATGAT
GCCTTGAGTAAGTTCACCTGTGATCTTATTCAAGTATTCATAAGTTCCTG
GCTCCTTCAATCGTTTAAGGGTGTGTATCCCAGCGGTCATTGCCAATGGA
TTCCCACTTAAGGTCCCAGCCTGGTACATTGGGCCTGCCGGTGCCACCAT
CTCCATGATATCCCTTCTTCCTCCATAAGCACCAACTGGCAGCCCACCTC
CAATGATTTTACCAAGAGTTGTCAAATCAGGAGTTACCCCAAAATATTCC
TGAGCTCCACCATAAGCTAAACGAAATCCAGTCATGACTTCATCAAAGAT
CAGGAGAGCACCATTCTCTTTGGTGATACGGCGGATGGCATTAAGAAAGT
CAGGCTTAGGAGCAATG
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