CX070593

Overview
NameCX070593
Unique NameCX070593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_SALAR (Glutamate-1-semialdehyde 2,1-aminomutase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=hemL PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.895e-42
Identity = 82/171 (47.95%), Postives = 114/171 (66.67%), Query Frame = -2
Query:    7 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE-GPVYNFEDAKKSETTKFARFY 516
            + P P+FL  +R +  E GALLI DEVMTGFR+A  GAQ+Y+GV PD           +PVGA+GGRRD+M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E LNK+T  L +G+ +A ++AG  +   ++ GMFG FFT+ G V  ++D    +  +F RF+
Sbjct:  213 VLPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGIHETLNKLTTRLAEGLREAAQEAGIPLVVNHVGGMFGIFFTDAGSVTCYQDVMACDVERFKRFF 383          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA2_EXIS2 (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 3.782e-42
Identity = 87/171 (50.88%), Postives = 110/171 (64.33%), Query Frame = -2
Query:    4 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 516
            + P+P FL  +R IT+++G LLIFDEVMTGFR+ +  AQ +FGVTPD           +PVGAYGGRRDIME +AP GP+YQAGTLSGNPLAM AG+ TL +LK P  YE  ++    L++G + A  K    +       MFG FFT+ PV NFE AK S    F  +Y+
Sbjct:  219 VPPQPGFLEGLREITEQHGTLLIFDEVMTGFRVGFNCAQGHFGVTPDITCLGKVIGGGMPVGAYGGRRDIMEQIAPQGPIYQAGTLSGNPLAMAAGLATLTQLK-PEHYEEFDRKANRLSEGYLAAAAKYNIPLTTNRAGAMFGVFFTDQPVTNFEQAKSSNLDMFRSYYQ 388          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_DESOH (Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=hemL PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 4.939e-42
Identity = 85/171 (49.71%), Postives = 111/171 (64.91%), Query Frame = -2
Query:    4 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 516
            + P P FL+A+R+ T+++G LLIFDEVM+GFR+AYGGAQ  + +TPD           +PVGAYGG R IM+ +AP G +YQAGTLSGNP+AM AGI TL  LK+PG YE L   T  L  G+  A   AG  +    +  M G FF + PV +F  AK S+ ++FA +YR
Sbjct:  215 VEPDPGFLSALRKETEKHGCLLIFDEVMSGFRVAYGGAQARYRITPDITCLGKVIGGGMPVGAYGGSRQIMKHIAPEGNIYQAGTLSGNPVAMAAGIATLSELKKPGVYEALEARTRRLADGLARAAADAGVPVQAHAVGAMLGLFFADRPVTDFASAKTSDLSRFAAYYR 385          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA2_EXISA (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 4.939e-42
Identity = 90/171 (52.63%), Postives = 107/171 (62.57%), Query Frame = -2
Query:    4 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 516
            + P+P FL  +R IT++NGALLIFDEVMTGFR+ Y  AQ YFGVTPD           LPVGAYGG+R+IME +AP GP+YQAGTLSGNPLAM AG  TL +LK P  YE   +    L +G   AG+K            MFGFFFT   V NFE AK +    F  +Y+
Sbjct:  217 VPPQPGFLEGLREITEQNGALLIFDEVMTGFRVGYNCAQGYFGVTPDLTCLGKVIGGGLPVGAYGGKREIMEQIAPQGPIYQAGTLSGNPLAMIAGYTTLSQLK-PEHYEEFERKADRLAEGFTQAGEKYNIPHDTNRAGSMFGFFFTNEKVTNFEKAKSANLEMFRSYYQ 386          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_PELTS (Glutamate-1-semialdehyde 2,1-aminomutase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=hemL PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.450e-42
Identity = 86/171 (50.29%), Postives = 110/171 (64.33%), Query Frame = -2
Query:    4 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 516
            + P P FL  +R +T   G+LLIFDEV+TGFRLAYGGAQE +GV PD           LPVGAYGGRR+IME VAP+GP+YQAGTLSGNPLA++AGI TL+ LK+PG Y  L +    L   +  A ++ G  +C      M   FFT   V ++  A  S+T ++A F+R
Sbjct:  218 VPPAPGFLEGLRNLTARYGSLLIFDEVITGFRLAYGGAQELYGVAPDLTCLGKVIGGGLPVGAYGGRREIMEQVAPSGPVYQAGTLSGNPLAVSAGIATLEVLKQPGVYGRLEQTAAALEDALKQAARQTGAEVCFNRAGSMLCAFFTGEEVKDYASACTSDTARYAAFFR 388          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_KLEP7 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hemL PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.450e-42
Identity = 82/171 (47.95%), Postives = 113/171 (66.08%), Query Frame = -2
Query:    7 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSETTKFARFY 516
            I P+P+FL  +R +  E GALLI DEVMTGFR+A  GAQ Y+GV PD           +PVGA+GGRR++M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E L ++T +L QG++DA + AG  +    + GMFG FFT+   V  ++D  K +  +F RF+
Sbjct:  213 IPPQPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQAYYGVEPDLTCLGKIIGGGMPVGAFGGRREVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLTELTNQLAQGLLDAARDAGIPLVVNNVGGMFGIFFTDAETVTCYQDVVKCDVERFKRFF 383          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_GEMAT (Glutamate-1-semialdehyde 2,1-aminomutase OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=hemL PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.450e-42
Identity = 85/170 (50.00%), Postives = 109/170 (64.12%), Query Frame = -2
Query:    7 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY 516
            I P P F+  +RRI  E GALL+FDEVMTGFR+A+GGA EYFGVTPD           LPV AYGG R +ME +AP GP+YQAGTLSGNPLAM AGI TL  L     ++ +   T  L  G+     + G  +   ++  M+GFFF +G V++F+DAK+S+   F RF+
Sbjct:  217 IEPTPGFIQGLRRIADETGALLVFDEVMTGFRIAFGGATEYFGVTPDLTALGKVIGGGLPVAAYGGSRTLMEHIAPTGPVYQAGTLSGNPLAMAAGIATLGALTR-SVHDEITNQTAALVDGLRGIATRRGVPLSARHVGSMWGFFFRDGDVHSFDDAKQSDVALFRRFF 385          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_ENTS8 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=hemL PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.450e-42
Identity = 82/171 (47.95%), Postives = 113/171 (66.08%), Query Frame = -2
Query:    7 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSETTKFARFY 516
            I P+PDFL  +R +  E GALLI DEVMTGFR+A  GAQ Y+ V PD           +PVGA+GGRR++ME +AP GP+YQAGTLSGNP+AM AG   L  + +PG +  L+ +T +L +G++DA ++AG  +   ++ GMFGFFFT+   V  + D  K +  +F RF+
Sbjct:  213 IPPQPDFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQAYYNVVPDLTCLGKIIGGGMPVGAFGGRREVMEALAPTGPVYQAGTLSGNPIAMAAGFACLSEVAQPGVHSTLDALTTQLAEGLLDAAQEAGVPLVVNHVGGMFGFFFTDADSVTCYHDVVKCDVERFKRFF 383          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_SHIBS (Glutamate-1-semialdehyde 2,1-aminomutase OS=Shigella boydii serotype 4 (strain Sb227) GN=hemL PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.100e-41
Identity = 79/171 (46.20%), Postives = 115/171 (67.25%), Query Frame = -2
Query:    7 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSETTKFARFY 516
            + P+P+FL  +R +  E GALLI DEVMTGFR+A  GAQ+Y+GV PD           +PVGA+GGRRD+M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E L+++T  L +G+++A ++AG  +   ++ GMFG FFT+   V  ++D    +  +F RF+
Sbjct:  213 VPPQPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEGLLEAAEEAGTPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFF 383          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_DESHD (Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=hemL PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.100e-41
Identity = 84/172 (48.84%), Postives = 112/172 (65.12%), Query Frame = -2
Query:    1 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 516
            + P+P FL  +R +T++ G+LLIFDEVMTGFR++YGGAQ  + + PD           LPV AYGG+R  ME VAP+GP+YQAGTLSGNPLAM AG+ TLK L++ G YE L K T  L +G+    ++ G  I    +  MF  FFT+ PV +F+ A  S+  +F  F+RG
Sbjct:  217 VLPQPGFLAGLRTLTQDYGSLLIFDEVMTGFRVSYGGAQGRYQIDPDLTCLGKVIGGGLPVAAYGGKRKYMEQVAPSGPIYQAGTLSGNPLAMAAGLATLKLLQQEGVYEGLEKKTARLAEGLQSIAQELGFPIWVNSVGAMFSAFFTDQPVIDFKSACSSDVERFGSFFRG 388          
The following BLAST results are available for this feature:
BLAST of CX070593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_SALAR2.895e-4247.95Glutamate-1-semialdehyde 2,1-aminomutase OS=Salmon... [more]
GSA2_EXIS23.782e-4250.88Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Exig... [more]
GSA_DESOH4.939e-4249.71Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulf... [more]
GSA2_EXISA4.939e-4252.63Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Exig... [more]
GSA_PELTS6.450e-4250.29Glutamate-1-semialdehyde 2,1-aminomutase OS=Peloto... [more]
GSA_KLEP76.450e-4247.95Glutamate-1-semialdehyde 2,1-aminomutase OS=Klebsi... [more]
GSA_GEMAT6.450e-4250.00Glutamate-1-semialdehyde 2,1-aminomutase OS=Gemmat... [more]
GSA_ENTS86.450e-4247.95Glutamate-1-semialdehyde 2,1-aminomutase OS=Entero... [more]
GSA_SHIBS1.100e-4146.20Glutamate-1-semialdehyde 2,1-aminomutase OS=Shigel... [more]
GSA_DESHD1.100e-4148.84Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulf... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17G04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17G04-M7-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070593 ID=CX070593; Name=CX070593; organism=Citrus sinensis; type=EST; length=517bp
TCCCCTGTAAAATCTTGCAAACTTTGTGGTTTCACTCTTCTTTGCATCCT
CAAAGTTGTAAACAGGCCCTTCGGTAAAGAAAAATCCAAACATCCCACTT
ATATACCCTCCACAAATGGCATGCCCAGCTTTCTTTCCAGCATCAATGAT
GCCTTGAGTAAGTTCACCTGTGATCTTATTCAAGTATTCATAAGTTCCTG
GCTCCTTCAATCGTTTAAGGGTGTGTATCCCAGCGGTCATTGCCAATGGA
TTCCCACTTAAGGTCCCAGCCTGGTACATTGGGCCTGCCGGTGCCACCAT
CTCCATGATATCCCTTCTTCCTCCATAAGCACCAACTGGCAGCCCACCTC
CAATGATTTTACCAAGAGTTGTCAAATCAGGAGTTACCCCAAAATATTCC
TGAGCTCCACCATAAGCTAAACGAAATCCAGTCATGACTTCATCAAAGAT
CAGGAGAGCACCATTCTCTTTGGTGATACGGCGGATGGCATTAAGAAAGT
CAGGCTTAGGAGCAATG
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